Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0609500-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:25738156:25741105:-1 gene:Os12g0609500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glucose/ribitol dehydrogenase family protein. (Os12t0609500-01)
Sequence

ATGGCGACGGCGAGGACGCTGGCGGCTGCGGCGGCGGCGGCGAGGGCGTTCTCGTTGACG
GCGACATCCGGCGGCGGCGTGTCCATGGTGCAGGGCGCGTCCCGCGGCATCGGGCTCGAG
TTCGTGAGGCAGCTGCTGAAGAGGAGCGACGAGGGCCGCGTCGTCGCGACGTGTCGCGCG
CCGGATTCAGCCGTGGAGCTTCAGAAGCTGAGGCAGGAGCACGAGCAGCGCCTCGCCGTG
CTCCCGCTCGACGTCACCGACGAGAGCACCATAGAGGCAGCTGCGGCCTCGATAGGAGAG
ACCCATGGATCTCTGAACCTGCTGATCAATGCAACTGGGATCCTTTCAATTCCGAATGTG
ATACATCCAGAGACTACATTTAGCAAAGTTCAGAAGTCATCCCTGCTACTGGCATATGAA
GTGAACGCTGTTGGCCCTATTTTAGTGATCAAGCATATGTGGCCATTCCTGAAGGCTGGA
GGTTGCTCTGAGACCGGGAGAGGATTTTCATTGGTTGCAAACATGAGTGCCAGAGTCGGT
TCAATAGGTGACAATGGCCTAGGAGGCTGGCATTCATATAGGGCTTCTAAAACAGCACTG
AATCAATTGACAAAGACTGTATCAGTTGAGCTGGGGAAAAAGGACAACATTGCCTGCATC
CTGCTGCATCCAGGAACCGTGGACACTGACCTCTCACGCCCTTTTCAGAAGAATGTTCCC
AAGGATAAGCTCTTCACAAGGGAGTTCTCTGTTCAGAAGCTACTGTCCATCATCGACAAT
GTCAAGAAGAGCGACAACGGCAAGTTCTTCGCTTGGGATGGACAAGAAATCCCATGGTGA

Peptide Sequence

PEP ID

Os12t0609500-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:25738156:25741105:-1 gene:Os12g0609500 transcript:Os12t0609500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glucose/ribitol dehydrogenase family protein. (Os12t0609500-01)
Sequence

MATARTLAAAAAAARAFSLTATSGGGVSMVQGASRGIGLEFVRQLLKRSDEGRVVATCRA
PDSAVELQKLRQEHEQRLAVLPLDVTDESTIEAAAASIGETHGSLNLLINATGILSIPNV
IHPETTFSKVQKSSLLLAYEVNAVGPILVIKHMWPFLKAGGCSETGRGFSLVANMSARVG
SIGDNGLGGWHSYRASKTALNQLTKTVSVELGKKDNIACILLHPGTVDTDLSRPFQKNVP
KDKLFTREFSVQKLLSIIDNVKKSDNGKFFAWDGQEIPW

Transcript Sequence

Transcript ID

Os12t0609500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:25738156:25741105:-1 gene:Os12g0609500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glucose/ribitol dehydrogenase family protein. (Os12t0609500-01)
Sequence

ATACGTGTGCCTTCATCTAGCCACGCAATTCTCCCCCAAAATTTCCCCCACAACAACGAC
CCGCCATTACTGCCCCTGTGCGCCTCGCCTCGCCACCGAACCGCCGCGAGCACCCGGAGG
AAGAGAATCGAATCGAGGCGAGAGGAGGAGCAATGGCGACGGCGAGGACGCTGGCGGCTG
CGGCGGCGGCGGCGAGGGCGTTCTCGTTGACGGCGACATCCGGCGGCGGCGTGTCCATGG
TGCAGGGCGCGTCCCGCGGCATCGGGCTCGAGTTCGTGAGGCAGCTGCTGAAGAGGAGCG
ACGAGGGCCGCGTCGTCGCGACGTGTCGCGCGCCGGATTCAGCCGTGGAGCTTCAGAAGC
TGAGGCAGGAGCACGAGCAGCGCCTCGCCGTGCTCCCGCTCGACGTCACCGACGAGAGCA
CCATAGAGGCAGCTGCGGCCTCGATAGGAGAGACCCATGGATCTCTGAACCTGCTGATCA
ATGCAACTGGGATCCTTTCAATTCCGAATGTGATACATCCAGAGACTACATTTAGCAAAG
TTCAGAAGTCATCCCTGCTACTGGCATATGAAGTGAACGCTGTTGGCCCTATTTTAGTGA
TCAAGCATATGTGGCCATTCCTGAAGGCTGGAGGTTGCTCTGAGACCGGGAGAGGATTTT
CATTGGTTGCAAACATGAGTGCCAGAGTCGGTTCAATAGGTGACAATGGCCTAGGAGGCT
GGCATTCATATAGGGCTTCTAAAACAGCACTGAATCAATTGACAAAGACTGTATCAGTTG
AGCTGGGGAAAAAGGACAACATTGCCTGCATCCTGCTGCATCCAGGAACCGTGGACACTG
ACCTCTCACGCCCTTTTCAGAAGAATGTTCCCAAGGATAAGCTCTTCACAAGGGAGTTCT
CTGTTCAGAAGCTACTGTCCATCATCGACAATGTCAAGAAGAGCGACAACGGCAAGTTCT
TCGCTTGGGATGGACAAGAAATCCCATGGTGATATCAATCAGCACTTCAGCAGAGCAAGT
GAGCAACAGTGTCCAAAATTTGTGCTCAATATTTTCTCAGCCTTTATTGTGTTGTTGGCA
CCAAATAGATCGTGTCAATGCTCGATTTGAATTCTATTTGGATCTACGATGATCTGAACA
TAACAAACC