Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0608500-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:25699763:25701967:1 gene:Os12g0608500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os12t0608500-01)
Sequence	ATGGCTTCCGGCCATCTCGTCGCCGTCGCCGTCGTCATCGGCTCGCTCTGCGTCGCGGCA GTCGGTCAGGGGAACAATATCGTGCTCCCGTTCGCGCCGTCGTGCTCGACCGCCGGCAAC TACACCGGCGACAGCCAGTACAAGAAGAACCTCGACCAGCTATTCACCACCCTCTCCGCC GGCGCCATCGCCGGCGACTGGTTCAACACCAGCTCGGTCGGGACGGGCGCCGACCAGGTG TTCGGCCTCATCATGTGCTACGCCGACCGCAACTCGACGCAGTGCCAGGAATGCCTCGCC GGCGCTCCGGCCGGGATCGTGCAGGTGTGCCCGGGAAGCCGAACGGCGGACGCCAACTAC GACGCCTGCCTCCTCCGCTACTCCGACAAGTCCTTCTTCTCCGAGCTCACCTACGGCGCC GACCCCACCATCGCCTGGAACGTCTACTTCACCCCCTTCGTCGACAACATGACCACCATG AACGACACGCGGCGGCGGCTGATGAGCCAGCTCGCCGAGAGGGCCGGCGACACCAAGCTC AGGCTGGACAACGGCAGCTTGCCGTACGCCGACTCGAAGCTCGGCACGTCGGCGTTGTAC GGGCTGGCGCAGTGCACGAGGGACCTGGCGGCGAGCGAGTGCCGGAGGTGCCTCAGCGGC TACGTCGACGACCTCAGCAACACCTTCCCCAACAACAGCGGCGGCGCCATTAAGGGGTAC AGCTGCTACCTCAGGTACCATCTTTGGCCGATCGACATCACGCTGCCGCCGCCGCCGTTG CCACCGCCGTCGCGGCCTCCGTCGTCGTCTCCGGCACCGCCTTCACCTCCTCCCTCGGTG TCGGGAGGACTCGTGGCCGGATCGACCGTCGGCGCCGTCTCGTTCTTGGTGGTTCTTGGT GTCTCAATCTGGCTCCTCTTGCGCCGGCGGCGGAAGCGCGCCGGCGAGGCGAGGGAGCTG GAGATGGACGAGGGCGACTTCTTCGACGATGAGGCCGATGACTTTGAGAAGGGGACTGGT CCCAAACGGTTCCACTACGGCGAGCTCGCCATCGCCACCGACGACTTCTCCGACGAGCAC AAGCTCGGTGAAGGCGGGTTCGGGTCAGTGTACAGAGGATTCTTGAAAGAGTTGAACCTT GACGTCGCCATTAAGAGAGTGTCCAAGAGCTCGAAGCAGGGGAGGAAGGAGTACGCGTCG GAGGTGCGGATCATCAGCCGCCTCCGCCACCGCAACCTGGTGCAGCTCATCGGCTGGTGC CACGGCGGCGGCGAGCTCCTCCTCGTCTACGAGCTCATGCCCAACGCCAGCCTCGACACC CACCTCTACAGCGCCAACGCCGGCGTGCTCCCATGGCCACTCAGGCACGAGATCGTGCTC GGCATCGGCTCGGCGCTGCTGTACCTGCACGAGGAGTGGGAGCAGTGTGTGGTGCACCGC GACATCAAGCCGAGCAACATCATGCTCGACGCCGCCTTCAACGCCAAGCTCGGCGACTTC GGCCTCGCCAGGCTCGTCGACCATGGCCGGGGCTCACACACCACGGTGCTCGCCGGCACC ATGGGGTACATGGACCCGGAGTGCATGATCACCGGCAGGGCGAACGCCGAGTCCGACGTG TACAGCTTCGGGGTCGTCCTACTTGAGATCGCCTGCGGCCGGCGACCGATAATGGCGGAC CACCAATCCGAGGTAGACGAAGACCGGATCCACATTGCTCAGTGGGTCTGGGATTTATAC GGCAATGGGAGGATTCTTGACGCCACTGACCGGCGGCTCAACGGCGAGTTCGACGGCGGG GAGATGGAGGCTGTCATGGTCGTCGGGCTCTGGTGCGCGCACCCTGACCGGAGCCTGCGG CCAACGATCAGGCAGGCCGTCGGCGTGCTGAGGGGCGAGGCGCCGCCGCCGAGCCTCCCG GCGAGGATGCCGGTGGCGACGTTCCTGCCGCCGGTTGATGCTTTCAACCACACATCATCT TCAGTTGCGACAGGAAGCAGCAGCGCCAGCACAGACACTACTCGGTCGTCCAGGACGACC GAGACATCTTCCTTGCTGAAATGA

Peptide Sequence

PEP ID	Os12t0608500-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:25699763:25701967:1 gene:Os12g0608500 transcript:Os12t0608500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os12t0608500-01)
Sequence	MASGHLVAVAVVIGSLCVAAVGQGNNIVLPFAPSCSTAGNYTGDSQYKKNLDQLFTTLSA GAIAGDWFNTSSVGTGADQVFGLIMCYADRNSTQCQECLAGAPAGIVQVCPGSRTADANY DACLLRYSDKSFFSELTYGADPTIAWNVYFTPFVDNMTTMNDTRRRLMSQLAERAGDTKL RLDNGSLPYADSKLGTSALYGLAQCTRDLAASECRRCLSGYVDDLSNTFPNNSGGAIKGY SCYLRYHLWPIDITLPPPPLPPPSRPPSSSPAPPSPPPSVSGGLVAGSTVGAVSFLVVLG VSIWLLLRRRRKRAGEARELEMDEGDFFDDEADDFEKGTGPKRFHYGELAIATDDFSDEH KLGEGGFGSVYRGFLKELNLDVAIKRVSKSSKQGRKEYASEVRIISRLRHRNLVQLIGWC HGGGELLLVYELMPNASLDTHLYSANAGVLPWPLRHEIVLGIGSALLYLHEEWEQCVVHR DIKPSNIMLDAAFNAKLGDFGLARLVDHGRGSHTTVLAGTMGYMDPECMITGRANAESDV YSFGVVLLEIACGRRPIMADHQSEVDEDRIHIAQWVWDLYGNGRILDATDRRLNGEFDGG EMEAVMVVGLWCAHPDRSLRPTIRQAVGVLRGEAPPPSLPARMPVATFLPPVDAFNHTSS SVATGSSSASTDTTRSSRTTETSSLLK

Transcript Sequence

Transcript ID	Os12t0608500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25699763:25701967:1 gene:Os12g0608500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os12t0608500-01)
Sequence	AGCTAGCCAAGAACAATAAGCAACTTCATAGTGTCCTAGCAACGGCGTCACCGGCCATGG CTTCCGGCCATCTCGTCGCCGTCGCCGTCGTCATCGGCTCGCTCTGCGTCGCGGCAGTCG GTCAGGGGAACAATATCGTGCTCCCGTTCGCGCCGTCGTGCTCGACCGCCGGCAACTACA CCGGCGACAGCCAGTACAAGAAGAACCTCGACCAGCTATTCACCACCCTCTCCGCCGGCG CCATCGCCGGCGACTGGTTCAACACCAGCTCGGTCGGGACGGGCGCCGACCAGGTGTTCG GCCTCATCATGTGCTACGCCGACCGCAACTCGACGCAGTGCCAGGAATGCCTCGCCGGCG CTCCGGCCGGGATCGTGCAGGTGTGCCCGGGAAGCCGAACGGCGGACGCCAACTACGACG CCTGCCTCCTCCGCTACTCCGACAAGTCCTTCTTCTCCGAGCTCACCTACGGCGCCGACC CCACCATCGCCTGGAACGTCTACTTCACCCCCTTCGTCGACAACATGACCACCATGAACG ACACGCGGCGGCGGCTGATGAGCCAGCTCGCCGAGAGGGCCGGCGACACCAAGCTCAGGC TGGACAACGGCAGCTTGCCGTACGCCGACTCGAAGCTCGGCACGTCGGCGTTGTACGGGC TGGCGCAGTGCACGAGGGACCTGGCGGCGAGCGAGTGCCGGAGGTGCCTCAGCGGCTACG TCGACGACCTCAGCAACACCTTCCCCAACAACAGCGGCGGCGCCATTAAGGGGTACAGCT GCTACCTCAGGTACCATCTTTGGCCGATCGACATCACGCTGCCGCCGCCGCCGTTGCCAC CGCCGTCGCGGCCTCCGTCGTCGTCTCCGGCACCGCCTTCACCTCCTCCCTCGGTGTCGG GAGGACTCGTGGCCGGATCGACCGTCGGCGCCGTCTCGTTCTTGGTGGTTCTTGGTGTCT CAATCTGGCTCCTCTTGCGCCGGCGGCGGAAGCGCGCCGGCGAGGCGAGGGAGCTGGAGA TGGACGAGGGCGACTTCTTCGACGATGAGGCCGATGACTTTGAGAAGGGGACTGGTCCCA AACGGTTCCACTACGGCGAGCTCGCCATCGCCACCGACGACTTCTCCGACGAGCACAAGC TCGGTGAAGGCGGGTTCGGGTCAGTGTACAGAGGATTCTTGAAAGAGTTGAACCTTGACG TCGCCATTAAGAGAGTGTCCAAGAGCTCGAAGCAGGGGAGGAAGGAGTACGCGTCGGAGG TGCGGATCATCAGCCGCCTCCGCCACCGCAACCTGGTGCAGCTCATCGGCTGGTGCCACG GCGGCGGCGAGCTCCTCCTCGTCTACGAGCTCATGCCCAACGCCAGCCTCGACACCCACC TCTACAGCGCCAACGCCGGCGTGCTCCCATGGCCACTCAGGCACGAGATCGTGCTCGGCA TCGGCTCGGCGCTGCTGTACCTGCACGAGGAGTGGGAGCAGTGTGTGGTGCACCGCGACA TCAAGCCGAGCAACATCATGCTCGACGCCGCCTTCAACGCCAAGCTCGGCGACTTCGGCC TCGCCAGGCTCGTCGACCATGGCCGGGGCTCACACACCACGGTGCTCGCCGGCACCATGG GGTACATGGACCCGGAGTGCATGATCACCGGCAGGGCGAACGCCGAGTCCGACGTGTACA GCTTCGGGGTCGTCCTACTTGAGATCGCCTGCGGCCGGCGACCGATAATGGCGGACCACC AATCCGAGGTAGACGAAGACCGGATCCACATTGCTCAGTGGGTCTGGGATTTATACGGCA ATGGGAGGATTCTTGACGCCACTGACCGGCGGCTCAACGGCGAGTTCGACGGCGGGGAGA TGGAGGCTGTCATGGTCGTCGGGCTCTGGTGCGCGCACCCTGACCGGAGCCTGCGGCCAA CGATCAGGCAGGCCGTCGGCGTGCTGAGGGGCGAGGCGCCGCCGCCGAGCCTCCCGGCGA GGATGCCGGTGGCGACGTTCCTGCCGCCGGTTGATGCTTTCAACCACACATCATCTTCAG TTGCGACAGGAAGCAGCAGCGCCAGCACAGACACTACTCGGTCGTCCAGGACGACCGAGA CATCTTCCTTGCTGAAATGACACTTGAGCAATGACGTTTTTTATCAGATTAATTAACTGC AAAAATGAATTGATTTTGACAGGAGCATCATACCTGTTTTTGACT