Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0607100-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:25650682:25652002:1 gene:Os12g0607100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Heterochromatin protein (Fragment). (Os12t0607100-01);Similar to Eukaryotic translation initiation factor 2 gamma subunit. (Os12t0607100-02)
Sequence	CAACATATCATTATTCTTCAGAACAAGATTGATCTTATCCAGGAAAGTGCAGCAATGAAT CAACATGAAGCGATCCAGAAATTCATCCAGGGTACCATAGCTGAAGGTGCTCCGGTGGTG CCAATATCTGCTCAGCTTAAGTATAACATTGATGTGATATGTGAATACATTGTGAAGAAA ATCCCCATTCCTGAAAGGAACTTCACTTCCCCTCCAAACATGATTGTCATTCGCTCCTTT GATGTCAACAAGCCTGGTTCAGAGGTTGATGAAATTAGGGGTGGTGTAGCTGGTGGCAGC ATCCTCAGAGGAGTTTTGAGGGTGAACCAGAACATTGAAGTCCGCCCTGGCATTGTAATG AAGGATGAAAGCGGCAACATCAAATGCACCCCAATCTATTCAAGGATTGTTTCGCTCTAT GCTGAGCAGAATGAGCTCCAATTTGCTGTGCCTGGAGGTCTTATTGGTGTGGGAACAACC ATGGATCCAACCTTGACACGTGCTGATAGACTGGTTGGTCAGGTTCTAGGTGAAGTTGGA TCACTTCCTGATGTCTATGTGGAGCTTGAGATCAACTTCTTCCTTCTTCGGAGGCTGTTG GGTGTGAGGACAAAAGGTACTGAGAAGGCTGGGAAGGTCTCCAAGCTCACCAAGGGTGAA ATCCTCATGCTTAACATCGGATCCATGTCGACTGGTGCTCGTGTGGTTGCTGTCAAGAAC GATCTTGCCAAACTTCAGCTCACTGCCCCTGTCTGCACAAGCAAAGGTGAGAAGGTTGCC CTTAGCCGTCGTGTTGAGAAGCATTGGCGACTCATCGGATGGGGCCAGATCCAGGCTGGC ACGACGCTCGAAGTTCCACCGTGTCCGCTCTGA

Peptide Sequence

PEP ID	Os12t0607100-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:25650682:25652002:1 gene:Os12g0607100 transcript:Os12t0607100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Heterochromatin protein (Fragment). (Os12t0607100-01);Similar to Eukaryotic translation initiation factor 2 gamma subunit. (Os12t0607100-02)
Sequence	QHIIILQNKIDLIQESAAMNQHEAIQKFIQGTIAEGAPVVPISAQLKYNIDVICEYIVKK IPIPERNFTSPPNMIVIRSFDVNKPGSEVDEIRGGVAGGSILRGVLRVNQNIEVRPGIVM KDESGNIKCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVG SLPDVYVELEINFFLLRRLLGVRTKGTEKAGKVSKLTKGEILMLNIGSMSTGARVVAVKN DLAKLQLTAPVCTSKGEKVALSRRVEKHWRLIGWGQIQAGTTLEVPPCPL

Transcript Sequence

Transcript ID	Os12t0607100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25650682:25652002:1 gene:Os12g0607100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Heterochromatin protein (Fragment). (Os12t0607100-01);Similar to Eukaryotic translation initiation factor 2 gamma subunit. (Os12t0607100-02)
Sequence	CAACATATCATTATTCTTCAGAACAAGATTGATCTTATCCAGGAAAGTGCAGCAATGAAT CAACATGAAGCGATCCAGAAATTCATCCAGGGTACCATAGCTGAAGGTGCTCCGGTGGTG CCAATATCTGCTCAGCTTAAGTATAACATTGATGTGATATGTGAATACATTGTGAAGAAA ATCCCCATTCCTGAAAGGAACTTCACTTCCCCTCCAAACATGATTGTCATTCGCTCCTTT GATGTCAACAAGCCTGGTTCAGAGGTTGATGAAATTAGGGGTGGTGTAGCTGGTGGCAGC ATCCTCAGAGGAGTTTTGAGGGTGAACCAGAACATTGAAGTCCGCCCTGGCATTGTAATG AAGGATGAAAGCGGCAACATCAAATGCACCCCAATCTATTCAAGGATTGTTTCGCTCTAT GCTGAGCAGAATGAGCTCCAATTTGCTGTGCCTGGAGGTCTTATTGGTGTGGGAACAACC ATGGATCCAACCTTGACACGTGCTGATAGACTGGTTGGTCAGGTTCTAGGTGAAGTTGGA TCACTTCCTGATGTCTATGTGGAGCTTGAGATCAACTTCTTCCTTCTTCGGAGGCTGTTG GGTGTGAGGACAAAAGGTACTGAGAAGGCTGGGAAGGTCTCCAAGCTCACCAAGGGTGAA ATCCTCATGCTTAACATCGGATCCATGTCGACTGGTGCTCGTGTGGTTGCTGTCAAGAAC GATCTTGCCAAACTTCAGCTCACTGCCCCTGTCTGCACAAGCAAAGGTGAGAAGGTTGCC CTTAGCCGTCGTGTTGAGAAGCATTGGCGACTCATCGGATGGGGCCAGATCCAGGCTGGC ACGACGCTCGAAGTTCCACCGTGTCCGCTCTGAAGTGCAGTTGTTTAGGCAGAAGTCTAC CAACAGTTTGAGGTAAGAGAGAAGGAAATGTGGAAGGGCAGAGAGCTCCTAGGCACTATT TTCGTGAGATGGAGGAGAAAACAAATGAGTTTGGAAGAGATGTCATTGCGTGAATTCACC TACGGTCGATACTGAAGTTTGCCTACATTACTAAGTTTGTTTACATTCTG