Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0606600-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:25622843:25628255:1 gene:Os12g0606600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA288 description:DNA-binding HORMA domain containing protein. (Os12t0606600-01)
Sequence	ATGGCGAGCGCAGAGGCGAAGGACGGGGAGGAGGTCATGGGGGAGGCACGCGAGGGTGAT CCAGTGGACAAGATAAGGAGGTTACTCCGTATTGCTATCTACAACATTGGATATGTTGAA GGATTTTTTCCAGATGCCTACTTCAGTGACATTGTAGTTCGAGAAGATGACATGGTGATA AAGCAGCTTGTCCCAATCGTAGATTCTGAATCAAGAAGGCTGATGAATTTGATAGATGAA GCTGAAGCATGTTTGTGTGATGCACTGAAGAAGAAGTATTTGAAAACACTGGTCTTTTCC ATCTGTGAAAAATACGAAGGCCCGGTGCTTCAGGAATTCATTTTCTCGTTTAGCTACCCC AGCACAGGTCCTGATGAAGTTGTGATGATGATGACTCGCACAGGAAGCAAAGTGATTACA AAGTTCGAAGCAAGTGCTGTCAAAGTAACTCCTAATCAAATGAGGAGCTCTGCTTGTAAG ATGATTCGGTTGATAGTTCAGCAGACAAGGACATACCCGGTACAAGAGGAGCATGCTATT GAAATGAAGCTATCGTTCTACGAGGATACAACTCCTGAAGATTATGAGCCACCTTTTCCC AAGTATTGTGTTAACAGTGAGGATGTAGCCATATGGAACAACAACATCTTGAAGATGGAA GTAGGGAATATAAACAACAAGCACGTTGTGTTAACATTGAAGGTTAAGAGTGCCCAGTCC TACTGCAAGAACAGTATAGTTGATGATTGTTCTGACTATGAGATGTGCGAATGCGAAACA TATGGTTACACTTCAGCTCCCAATGATGATACTGAAGAAGACTATCACACGGGAATGCTA GCATCACCAATTAAAGCATGGTACCCACAAGACACTGGAACTCAAATGACGCGTAAAAGG AAAACTGGATTTGTGCTGGTATCTTCTTCAAAAAAGATCAAGTTCCTTTTGGATTCAGGT GCCTCTCACCATATTTGTAATGATAAAGCCATCATGCGCAATTTGAAGGACGTGAAGAAG GAGTACCAAGTTTCACTTGCTTCATGTGGTGGGTTAGAGCTGAAAGCGGAAATGATGGGA ACTGTGGTCACAAAAGATATGAAACTCAGCCAAGTGGGCTATATACCTGAAATGGAATTC AATGTCGTATCCATTGGACAATTGGCAGTCCAAGGTTTGATAACAACAGGCGGGGATGGT CGGTTCAGTGTCATTGATGCAAAGGAAGCGAGAGTGGTTGGTGAAGGGCATTTACAAAGA AAAACAGAGAAAGTTGATGGCAGAGTATACCATGAATATGTATTCAAATCATTGATCCGG GAGATTGAAGGTGATGATGAGAAGTTAATTGAACCCTTGCGGGCAGATGATGATGAAATC GATGAGGAAGAGGAGAAGAAATGCTGGGTAATTGACACAGGGTGCGGGAGACACATGATT CCAGATATTAGTATACTAACCCAAGTCAAGCGTGAGGAGGTCACATTCCAAGCAGCATGT GGAATCGTGTCATCAACCCATAAAGGATTGGTCAAGGAGGGAAATCTCATATTGAGGGAT GTGTTGTGCTGCCCAAAAGTCACAAGAAAAATGATATCAGGCCCAATGTTGGATTTAAGC GGCCATAGGTTCACTTTTAACGATAAGAAATGCTGCATAGTGCACAAGGATGGGTTGGAG CTGAGAGGGGTTGGCAAACTGGATAGGGCGACTAGAACGTACTTGTTGAAACCCGGTGAA GACAGTAGAGCAGCAGCAGCAGCAAAAGAGGAGCCAAAGATGTTGGCAGCAGCAGCAGAA GGATATGGTGGACCAAAACAAGAAGCCGACACGAAGAATATGAGGGGCAAAGGCAAGAAG ACTGCCCAAGCAACTAAGAGGCTGCGACTTAGTTAG

Peptide Sequence

PEP ID	Os12t0606600-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:25622843:25628255:1 gene:Os12g0606600 transcript:Os12t0606600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA288 description:DNA-binding HORMA domain containing protein. (Os12t0606600-01)
Sequence	MASAEAKDGEEVMGEAREGDPVDKIRRLLRIAIYNIGYVEGFFPDAYFSDIVVREDDMVI KQLVPIVDSESRRLMNLIDEAEACLCDALKKKYLKTLVFSICEKYEGPVLQEFIFSFSYP STGPDEVVMMMTRTGSKVITKFEASAVKVTPNQMRSSACKMIRLIVQQTRTYPVQEEHAI EMKLSFYEDTTPEDYEPPFPKYCVNSEDVAIWNNNILKMEVGNINNKHVVLTLKVKSAQS YCKNSIVDDCSDYEMCECETYGYTSAPNDDTEEDYHTGMLASPIKAWYPQDTGTQMTRKR KTGFVLVSSSKKIKFLLDSGASHHICNDKAIMRNLKDVKKEYQVSLASCGGLELKAEMMG TVVTKDMKLSQVGYIPEMEFNVVSIGQLAVQGLITTGGDGRFSVIDAKEARVVGEGHLQR KTEKVDGRVYHEYVFKSLIREIEGDDEKLIEPLRADDDEIDEEEEKKCWVIDTGCGRHMI PDISILTQVKREEVTFQAACGIVSSTHKGLVKEGNLILRDVLCCPKVTRKMISGPMLDLS GHRFTFNDKKCCIVHKDGLELRGVGKLDRATRTYLLKPGEDSRAAAAAKEEPKMLAAAAE GYGGPKQEADTKNMRGKGKKTAQATKRLRLS

Transcript Sequence

Transcript ID	Os12t0606600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25622843:25628255:1 gene:Os12g0606600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA288 description:DNA-binding HORMA domain containing protein. (Os12t0606600-01)
Sequence	GCACGCAAACTCTCGGGCGAGATCAGCGCAGGCCGTAGAGAGGGGAGGGAAATGGCGAGC GCAGAGGCGAAGGACGGGGAGGAGGTCATGGGGGAGGCACGCGAGGGTGATCCAGTGGAC AAGATAAGGAGGTTACTCCGTATTGCTATCTACAACATTGGATATGTTGAAGGATTTTTT CCAGATGCCTACTTCAGTGACATTGTAGTTCGAGAAGATGACATGGTGATAAAGCAGCTT GTCCCAATCGTAGATTCTGAATCAAGAAGGCTGATGAATTTGATAGATGAAGCTGAAGCA TGTTTGTGTGATGCACTGAAGAAGAAGTATTTGAAAACACTGGTCTTTTCCATCTGTGAA AAATACGAAGGCCCGGTGCTTCAGGAATTCATTTTCTCGTTTAGCTACCCCAGCACAGGT CCTGATGAAGTTGTGATGATGATGACTCGCACAGGAAGCAAAGTGATTACAAAGTTCGAA GCAAGTGCTGTCAAAGTAACTCCTAATCAAATGAGGAGCTCTGCTTGTAAGATGATTCGG TTGATAGTTCAGCAGACAAGGACATACCCGGTACAAGAGGAGCATGCTATTGAAATGAAG CTATCGTTCTACGAGGATACAACTCCTGAAGATTATGAGCCACCTTTTCCCAAGTATTGT GTTAACAGTGAGGATGTAGCCATATGGAACAACAACATCTTGAAGATGGAAGTAGGGAAT ATAAACAACAAGCACGTTGTGTTAACATTGAAGGTTAAGAGTGCCCAGTCCTACTGCAAG AACAGTATAGTTGATGATTGTTCTGACTATGAGATGTGCGAATGCGAAACATATGGTTAC ACTTCAGCTCCCAATGATGATACTGAAGAAGACTATCACACGGGAATGCTAGCATCACCA ATTAAAGCATGGTACCCACAAGACACTGGAACTCAAATGACGCGTAAAAGGAAAACTGGA TTTGTGCTGGTATCTTCTTCAAAAAAGATCAAGTTCCTTTTGGATTCAGGTGCCTCTCAC CATATTTGTAATGATAAAGCCATCATGCGCAATTTGAAGGACGTGAAGAAGGAGTACCAA GTTTCACTTGCTTCATGTGGTGGGTTAGAGCTGAAAGCGGAAATGATGGGAACTGTGGTC ACAAAAGATATGAAACTCAGCCAAGTGGGCTATATACCTGAAATGGAATTCAATGTCGTA TCCATTGGACAATTGGCAGTCCAAGGTTTGATAACAACAGGCGGGGATGGTCGGTTCAGT GTCATTGATGCAAAGGAAGCGAGAGTGGTTGGTGAAGGGCATTTACAAAGAAAAACAGAG AAAGTTGATGGCAGAGTATACCATGAATATGTATTCAAATCATTGATCCGGGAGATTGAA GGTGATGATGAGAAGTTAATTGAACCCTTGCGGGCAGATGATGATGAAATCGATGAGGAA GAGGAGAAGAAATGCTGGGTAATTGACACAGGGTGCGGGAGACACATGATTCCAGATATT AGTATACTAACCCAAGTCAAGCGTGAGGAGGTCACATTCCAAGCAGCATGTGGAATCGTG TCATCAACCCATAAAGGATTGGTCAAGGAGGGAAATCTCATATTGAGGGATGTGTTGTGC TGCCCAAAAGTCACAAGAAAAATGATATCAGGCCCAATGTTGGATTTAAGCGGCCATAGG TTCACTTTTAACGATAAGAAATGCTGCATAGTGCACAAGGATGGGTTGGAGCTGAGAGGG GTTGGCAAACTGGATAGGGCGACTAGAACGTACTTGTTGAAACCCGGTGAAGACAGTAGA GCAGCAGCAGCAGCAAAAGAGGAGCCAAAGATGTTGGCAGCAGCAGCAGAAGGATATGGT GGACCAAAACAAGAAGCCGACACGAAGAATATGAGGGGCAAAGGCAAGAAGACTGCCCAA GCAACTAAGAGGCTGCGACTTAGTTAGACATGAAACCTGAGAGTCCACCCCACACACGGG AGAATCGGATACTTCACTAGAATTGGTGTTCATCTTGAATGTTCATTGTCAACCCAATCT TGATTGTCAACCGTTTTGGCATATTTTCAGTGCAACTGCTTACAGTACTTTGGTAGGGTT GTACTGTGTACCTGATGAGTGGACTACTTATCTGATTTCAGTCATTGATTGAGTACATTT AAGTGTACTGACTACTGACAAGCTTCATTTATCACACTGATTGTTCCAATTGTTT