Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0605800-03
CDS Infomation	cds chromosome:IRGSP-1.0:12:25578071:25581973:1 gene:Os12g0605800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MCCA description:Similar to 3-methylcrotonyl CoA carboxylase biotin-containing subunit (Fragment). (Os12t0605800-01);Similar to Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial. (Os12t0605800-02);Similar to Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial. (Os12t0605800-03)
Sequence	TTTTTGAAGGGGATGAGAATAGTTCAAAGGCCTGAGGACTTTGTGGATTCTGTATTGAGT GCTCAACGAGAAGCCGCAGCATCATTTGGCATAAACACGCTGCTGGTTGAGAAGTATATT ACCCAACCCAGACATATAGAAGTCCAGATATTTGGAGATCAACATGGAAATGTGATTCAC CTTTATGAGAGAGATTGTAGTCTACAAAGAAGGCACCAAAAGATTATCGAGGAAGCTCCA GCTCCAAATGTGACAGCTCAGTTTCGGTCTCATATTGGTGAAGCTGCTGTATCAGCTGCA AAGGCAGTTGGTTACTACAGTGCTGGAACAGTGGAGTTTATCGTGGATACTCTTTCCGGA GAATTCTATTTCATGGAAATGAATACTCGGCTCCAGGTTGAACACCCAGTGACCGAGATG ATCGTTGGCCAAGATCTTGTTGAGTGGCAAATACGAATTGCAAATGGAGAGTGCCTACCA TTATCTCAGGAGCAGGTTCCGTTAAATGGACATGCGTTTGAAGCCCGAATATACGCAGAA AATGTGCCAAGGGGATTTCTTCCTGCTACAGGAACCTTACACCACTACAGGCCAGTTCCC TCTACCGCAACAGTAAGAGTTGAAACTGGAGTTGAAGAAGGAGATACTGTCAGCATGCAT TATGATCCCATGATAGCCAAACTTGTGGTTTGGGGTGAAAGTCGCAATGCTGCGCTAGTC AAGCTAAAGAACAGCCTGTCAAACTTTCAGATTGCAGGTTTGCCGACCAATGTTGGTTTC CTCCAAGAACTCGCAGGTCATAGTGCCTTTGAAAAAGGCCTAGTCGATACACATTTCATT GAACGCTATCAAAATGATCTTCTGAGTACTTCTACTCAAGCCTTGAGTGGATCACATGAA GCAGAAGAGCTTGGTGCAATTTTGGCTGCTGCCTGCATTTGCAAGAAGGATCATGTTTCC TCTGAAGTGTCACTTCATGATAAGAAACTTTCTATGTGGTACGCCCATCCACCTTTCAGG ATGCATCATTTTGCCAAGCGTCTAATGGAATTTGAGTTGGATAGAGAACTTGGTGGATCA AGTGATGATCTTCTTAAACTGTCGGTAACATATAGATCTGACGGAACCTACTTCGTTGAG ACTGAAGATGGTTCTTCTCCTGGATTGGATGTCAAAGTAGATAGCAGAGGTGACCATGAT TTCCGGGTTGATGTTGGTGGGCTGCAAACAGACGTAACTCTAGCATTTTATTCAAAGGAC AATTGCAACCATATACACATCTGGCATGGGAAGCATCATCATCATTACAGGCAGACGTTG AGAGCTGAGCAGTCACCTGATGACAGTTCTCAACCTAGCGCTTCCTCTGAGGCGAGGTCA CATCCAAAGGGGAGTGTTTTGGCACCAATGGCTGGTCTGGTTGTAAAGGTTTTGCTTAAA GACGGGGCACGGGTGGAGGAAGGTCAGCCTGTCATGGTTATGGAAGCAATGAAGATGGAG CATGTTGTGAAGGCGCCTTGTGCCGGATATGTGGAAGGGCTGAAGGCTACTGCCGGACAA CAAGTTTTTGACTCTAGTGTCCTTTTCACCGTGAAGGAGAACAAGCCAAATTGA

Peptide Sequence

PEP ID	Os12t0605800-03
PEP Infomation	pep chromosome:IRGSP-1.0:12:25578071:25581973:1 gene:Os12g0605800 transcript:Os12t0605800-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MCCA description:Similar to 3-methylcrotonyl CoA carboxylase biotin-containing subunit (Fragment). (Os12t0605800-01);Similar to Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial. (Os12t0605800-02);Similar to Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial. (Os12t0605800-03)
Sequence	FLKGMRIVQRPEDFVDSVLSAQREAAASFGINTLLVEKYITQPRHIEVQIFGDQHGNVIH LYERDCSLQRRHQKIIEEAPAPNVTAQFRSHIGEAAVSAAKAVGYYSAGTVEFIVDTLSG EFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRIANGECLPLSQEQVPLNGHAFEARIYAE NVPRGFLPATGTLHHYRPVPSTATVRVETGVEEGDTVSMHYDPMIAKLVVWGESRNAALV KLKNSLSNFQIAGLPTNVGFLQELAGHSAFEKGLVDTHFIERYQNDLLSTSTQALSGSHE AEELGAILAAACICKKDHVSSEVSLHDKKLSMWYAHPPFRMHHFAKRLMEFELDRELGGS SDDLLKLSVTYRSDGTYFVETEDGSSPGLDVKVDSRGDHDFRVDVGGLQTDVTLAFYSKD NCNHIHIWHGKHHHHYRQTLRAEQSPDDSSQPSASSEARSHPKGSVLAPMAGLVVKVLLK DGARVEEGQPVMVMEAMKMEHVVKAPCAGYVEGLKATAGQQVFDSSVLFTVKENKPN

Transcript Sequence

Transcript ID	Os12t0605800-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25578071:25581973:1 gene:Os12g0605800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MCCA description:Similar to 3-methylcrotonyl CoA carboxylase biotin-containing subunit (Fragment). (Os12t0605800-01);Similar to Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial. (Os12t0605800-02);Similar to Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial. (Os12t0605800-03)
Sequence	TTTTTGAAGGGGATGAGAATAGTTCAAAGGCCTGAGGACTTTGTGGATTCTGTATTGAGT GCTCAACGAGAAGCCGCAGCATCATTTGGCATAAACACGCTGCTGGTTGAGAAGTATATT ACCCAACCCAGACATATAGAAGTCCAGATATTTGGAGATCAACATGGAAATGTGATTCAC CTTTATGAGAGAGATTGTAGTCTACAAAGAAGGCACCAAAAGATTATCGAGGAAGCTCCA GCTCCAAATGTGACAGCTCAGTTTCGGTCTCATATTGGTGAAGCTGCTGTATCAGCTGCA AAGGCAGTTGGTTACTACAGTGCTGGAACAGTGGAGTTTATCGTGGATACTCTTTCCGGA GAATTCTATTTCATGGAAATGAATACTCGGCTCCAGGTTGAACACCCAGTGACCGAGATG ATCGTTGGCCAAGATCTTGTTGAGTGGCAAATACGAATTGCAAATGGAGAGTGCCTACCA TTATCTCAGGAGCAGGTTCCGTTAAATGGACATGCGTTTGAAGCCCGAATATACGCAGAA AATGTGCCAAGGGGATTTCTTCCTGCTACAGGAACCTTACACCACTACAGGCCAGTTCCC TCTACCGCAACAGTAAGAGTTGAAACTGGAGTTGAAGAAGGAGATACTGTCAGCATGCAT TATGATCCCATGATAGCCAAACTTGTGGTTTGGGGTGAAAGTCGCAATGCTGCGCTAGTC AAGCTAAAGAACAGCCTGTCAAACTTTCAGATTGCAGGTTTGCCGACCAATGTTGGTTTC CTCCAAGAACTCGCAGGTCATAGTGCCTTTGAAAAAGGCCTAGTCGATACACATTTCATT GAACGCTATCAAAATGATCTTCTGAGTACTTCTACTCAAGCCTTGAGTGGATCACATGAA GCAGAAGAGCTTGGTGCAATTTTGGCTGCTGCCTGCATTTGCAAGAAGGATCATGTTTCC TCTGAAGTGTCACTTCATGATAAGAAACTTTCTATGTGGTACGCCCATCCACCTTTCAGG ATGCATCATTTTGCCAAGCGTCTAATGGAATTTGAGTTGGATAGAGAACTTGGTGGATCA AGTGATGATCTTCTTAAACTGTCGGTAACATATAGATCTGACGGAACCTACTTCGTTGAG ACTGAAGATGGTTCTTCTCCTGGATTGGATGTCAAAGTAGATAGCAGAGGTGACCATGAT TTCCGGGTTGATGTTGGTGGGCTGCAAACAGACGTAACTCTAGCATTTTATTCAAAGGAC AATTGCAACCATATACACATCTGGCATGGGAAGCATCATCATCATTACAGGCAGACGTTG AGAGCTGAGCAGTCACCTGATGACAGTTCTCAACCTAGCGCTTCCTCTGAGGCGAGGTCA CATCCAAAGGGGAGTGTTTTGGCACCAATGGCTGGTCTGGTTGTAAAGGTTTTGCTTAAA GACGGGGCACGGGTGGAGGAAGGTCAGCCTGTCATGGTTATGGAAGCAATGAAGATGGAG CATGTTGTGAAGGCGCCTTGTGCCGGATATGTGGAAGGGCTGAAGGCTACTGCCGGACAA CAAGTTTTTGACTCTAGTGTCCTTTTCACCGTGAAGGAGAACAAGCCAAATTGAGAAACC CAGGCAGAGATTCACGACCTGTACAGCTCAATTCACAGACGCTTCATAAGTTGGCTGATG ATGCTGCCGGCCGTCCAAAAGCAAGCAAATAATAAGCGACAACATCGAGTTCACAACACA AAAGCAAGCAAAAATAAGCAACGGGTTCATCTGTGTGAATAAATTAGTTGACGAGCTCCC AACCCACCCCCTGTTGTTGTTGTCGCAAACCTGAAACTGTACAGTGTACATTACTGCTGT CACATACAGTGACAAAAACAATTAAACCTCATTTGTTCTTC