Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0605500-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:25561790:25569052:-1 gene:Os12g0605500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tesmin/TSO1-like, CXC domain containing protein. (Os12t0605500-01)
Sequence	ATGGACACGCCGGATAGGCCCCCCCGCGCCGCCGCCACCGCGGCCGTCGAGGACTCTCCT GTCTTCAATTTCATCAACAGCCTATCTCCTATACCACCACCTAAGCCTTCAGACTCAGCA CATAATGTTCAACTATTCAAGTCATCAGACTTGGCTCCTGTTTCCTCAATCTTTGCCTCA CCACATGTCAATCCTGCAAAGGAATCTAAACTTCCAATCAGGGAAGATTCTGTTCAACTT TCTCGAGAATCGCACTCTCCGAACAGTGTCAGAACTCGAACAGGGGCCACAAGCTCTATT ATTAGAATGATCAGATGCAAAAACATTGTTTCAGAAAATTGCAGTATAACTTGTTACCTA AATGATTCAACTTCAAGTAAAGCATCTCAACCCATCCAGCTTTGTGGCGGCAGTGCAGAA AGTGATACGAATCAAAATACTGATGGTAAAAAGGATCCCACTACAGAGCAAGACCGTACA GACATAGAATTCGTCCTACTTGATCAGTGTGGACCAGAAAAAATGGATTCATCACAGTCA GGTAATAATGCTTGTGAAAACCAACTGTCTGAACAACACAAGGATGAACTTGGGTCATTT GATGGGGGTTACATGTTTGCACATCAACCACATAGTGATATGCTGAGATTAGCTCCACCA TTTGAGTCAGAAACACAGTTAGTGAATGAGACATTACAAACAGATAATGTCTACTGTGAA ACCTTGTTGACCGATGGGCCAAGTGGCTCTTACACACAAAATTCTGCACCTGATCCTCAT CTTTACTGGGCTGGGGCAGTTGAAGGGTGTGCAACAGATTATACCCCCCAAATGCTCCCT GGTGCTTGTCAAAGCCAGTTGGTGCCAAATGATCAAATCAATAACAAGCTCAACGAGCCC AGTGATTACATGCCAATGGACCACAATGTGTCATCACAGAATTTACGTGGCATGCGTAGA CGTTGCCTTTTCAATGAAAAGAGTGGAGCTGCTAATGAAGGGGCAAAGAACTCCTCAGCT CGTCATTCTACAAATTCAACCACACCCAGACGCAAGATTAGTTCCAGTGATAACAACTTA AAGACTCTGAGGACCCCTCCATGTGCATTGCCTGGTATTGGCTTGCATTTGAATGCCCTT GCCACAGTGCCAAAGGATAAAATGGTTCCCCATAATGACATTCAATCCTCTTTGAATCAA GCCAGCAATGTTCCGTCTGCTGTTGGTTCTTCTCCACCAACAGATGATCCACATACTATA AATGATGACTCCTCCCAGACAGCCGTGGTTGCATATGTTGGTGAATCGAGTCAGGGTAGT CCCAAGAAGAAAAGACACAAGTTCGACAATGGTGATGGCACGTCGTGCAAGCGTTGTAGC TGTAAGAAGTCAAAATGCTTGAAGCTGTACTGTGAGTGTTTTCATGCTGGTGTCTTTTGT TCAGAACCTTGTTCGTGTCAAGGCTGTCTGAATATGCCTAGCAACATGGAAACAGTTCTA TCGACTCGAGAGCAGATTGAGTCTCGTAATCCACTTGCATTTGCTCCTAAAGTAATTCGC ACTGAGCCTGGTCAGGAATTAGCTGATGACTCTAACAAAACTCCTGCTTCTTCTCGTCAC AAAAGAGGCTGCAATTGTAAGAAGTCATCGTGTTTGAAAAAATACTGCGAATGTTATCAG GGTGGTGTTGGATGCTCTGTGAGTTGCCGATGTGAGGGTTGTAAGAATGCTTTTGGGAGG AGGGAGGGAGTTGCACTGTTAGGCATAGAGGAAGCTAAGCGTGGATGCGAAGAAAAGGAT GGAGGCGTGAAGGAAGAAACCACTGATAATGATAAGCAGCTTGTTATCTATCAAGATAGT ATCAACCTTACTCCTGCTGAGAGTGTGCTGGCAACACCTTCAGTTGTGGATTACAGACCC TTGGTTGCTCTTCCACCTTTGAGCTCCAAGAAGCCAAGATCGTCGACGAAGCTTGGTGGA TATTCTTCTCGACTTGAAGGACACCTGAAGTCTGACATTCTACTCTCTCCATTCGAAAGC TACGCAGAAATGATGCTCGGGGATGGTACATCAAATGTCCTAAAAGGGGAATCATCCCCT CAAACTTCTGTCAAGGTCGTGTCACCTAATAAAAAGAGGGTCTCTCCCCCTCGCATTGGT ACCGGATTGTCTCCGATCTGCAAGAGTGGCAGGAAGTTGATTCTCAAGTCCATCCCTTCA TTCCCTTCTCTTGGTGTCGACATTACTAACGAGGATCCAAACACTAGTTCGCTAGCTCCT TGA

Peptide Sequence

PEP ID	Os12t0605500-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:25561790:25569052:-1 gene:Os12g0605500 transcript:Os12t0605500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tesmin/TSO1-like, CXC domain containing protein. (Os12t0605500-01)
Sequence	MDTPDRPPRAAATAAVEDSPVFNFINSLSPIPPPKPSDSAHNVQLFKSSDLAPVSSIFAS PHVNPAKESKLPIREDSVQLSRESHSPNSVRTRTGATSSIIRMIRCKNIVSENCSITCYL NDSTSSKASQPIQLCGGSAESDTNQNTDGKKDPTTEQDRTDIEFVLLDQCGPEKMDSSQS GNNACENQLSEQHKDELGSFDGGYMFAHQPHSDMLRLAPPFESETQLVNETLQTDNVYCE TLLTDGPSGSYTQNSAPDPHLYWAGAVEGCATDYTPQMLPGACQSQLVPNDQINNKLNEP SDYMPMDHNVSSQNLRGMRRRCLFNEKSGAANEGAKNSSARHSTNSTTPRRKISSSDNNL KTLRTPPCALPGIGLHLNALATVPKDKMVPHNDIQSSLNQASNVPSAVGSSPPTDDPHTI NDDSSQTAVVAYVGESSQGSPKKKRHKFDNGDGTSCKRCSCKKSKCLKLYCECFHAGVFC SEPCSCQGCLNMPSNMETVLSTREQIESRNPLAFAPKVIRTEPGQELADDSNKTPASSRH KRGCNCKKSSCLKKYCECYQGGVGCSVSCRCEGCKNAFGRREGVALLGIEEAKRGCEEKD GGVKEETTDNDKQLVIYQDSINLTPAESVLATPSVVDYRPLVALPPLSSKKPRSSTKLGG YSSRLEGHLKSDILLSPFESYAEMMLGDGTSNVLKGESSPQTSVKVVSPNKKRVSPPRIG TGLSPICKSGRKLILKSIPSFPSLGVDITNEDPNTSSLAP

Transcript Sequence

Transcript ID	Os12t0605500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25561790:25569052:-1 gene:Os12g0605500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tesmin/TSO1-like, CXC domain containing protein. (Os12t0605500-01)
Sequence	ATAACAAGAGAGAAGAAGAGAAGAAACCGGAAGAGCAGCCTCCTCGCCTCGTGTCAGGGC AAAGGCCCAGTAAAACCACTAGTGGAGCAGCATCAGCATCAGCAGCAGCAGCGCACTCCT CCTCCTCCTACTCCTCACTCGCCAGCAGCCGCAGCCGAGGAGGAGGCGGAGGCGGATGCG GGAGATCCCCCGCGTGGCCGCCGCCGCCGCCGCCGGAGATGGACACGCCGGATAGGCCCC CCCGCGCCGCCGCCACCGCGGCCGTCGAGGACTCTCCTGTCTTCAATTTCATCAACAGCC TATCTCCTATACCACCACCTAAGCCTTCAGACTCAGCACATAATGTTCAACTATTCAAGT CATCAGACTTGGCTCCTGTTTCCTCAATCTTTGCCTCACCACATGTCAATCCTGCAAAGG AATCTAAACTTCCAATCAGGGAAGATTCTGTTCAACTTTCTCGAGAATCGCACTCTCCGA ACAGTGTCAGAACTCGAACAGGGGCCACAAGCTCTATTATTAGAATGATCAGATGCAAAA ACATTGTTTCAGAAAATTGCAGTATAACTTGTTACCTAAATGATTCAACTTCAAGTAAAG CATCTCAACCCATCCAGCTTTGTGGCGGCAGTGCAGAAAGTGATACGAATCAAAATACTG ATGGTAAAAAGGATCCCACTACAGAGCAAGACCGTACAGACATAGAATTCGTCCTACTTG ATCAGTGTGGACCAGAAAAAATGGATTCATCACAGTCAGGTAATAATGCTTGTGAAAACC AACTGTCTGAACAACACAAGGATGAACTTGGGTCATTTGATGGGGGTTACATGTTTGCAC ATCAACCACATAGTGATATGCTGAGATTAGCTCCACCATTTGAGTCAGAAACACAGTTAG TGAATGAGACATTACAAACAGATAATGTCTACTGTGAAACCTTGTTGACCGATGGGCCAA GTGGCTCTTACACACAAAATTCTGCACCTGATCCTCATCTTTACTGGGCTGGGGCAGTTG AAGGGTGTGCAACAGATTATACCCCCCAAATGCTCCCTGGTGCTTGTCAAAGCCAGTTGG TGCCAAATGATCAAATCAATAACAAGCTCAACGAGCCCAGTGATTACATGCCAATGGACC ACAATGTGTCATCACAGAATTTACGTGGCATGCGTAGACGTTGCCTTTTCAATGAAAAGA GTGGAGCTGCTAATGAAGGGGCAAAGAACTCCTCAGCTCGTCATTCTACAAATTCAACCA CACCCAGACGCAAGATTAGTTCCAGTGATAACAACTTAAAGACTCTGAGGACCCCTCCAT GTGCATTGCCTGGTATTGGCTTGCATTTGAATGCCCTTGCCACAGTGCCAAAGGATAAAA TGGTTCCCCATAATGACATTCAATCCTCTTTGAATCAAGCCAGCAATGTTCCGTCTGCTG TTGGTTCTTCTCCACCAACAGATGATCCACATACTATAAATGATGACTCCTCCCAGACAG CCGTGGTTGCATATGTTGGTGAATCGAGTCAGGGTAGTCCCAAGAAGAAAAGACACAAGT TCGACAATGGTGATGGCACGTCGTGCAAGCGTTGTAGCTGTAAGAAGTCAAAATGCTTGA AGCTGTACTGTGAGTGTTTTCATGCTGGTGTCTTTTGTTCAGAACCTTGTTCGTGTCAAG GCTGTCTGAATATGCCTAGCAACATGGAAACAGTTCTATCGACTCGAGAGCAGATTGAGT CTCGTAATCCACTTGCATTTGCTCCTAAAGTAATTCGCACTGAGCCTGGTCAGGAATTAG CTGATGACTCTAACAAAACTCCTGCTTCTTCTCGTCACAAAAGAGGCTGCAATTGTAAGA AGTCATCGTGTTTGAAAAAATACTGCGAATGTTATCAGGGTGGTGTTGGATGCTCTGTGA GTTGCCGATGTGAGGGTTGTAAGAATGCTTTTGGGAGGAGGGAGGGAGTTGCACTGTTAG GCATAGAGGAAGCTAAGCGTGGATGCGAAGAAAAGGATGGAGGCGTGAAGGAAGAAACCA CTGATAATGATAAGCAGCTTGTTATCTATCAAGATAGTATCAACCTTACTCCTGCTGAGA GTGTGCTGGCAACACCTTCAGTTGTGGATTACAGACCCTTGGTTGCTCTTCCACCTTTGA GCTCCAAGAAGCCAAGATCGTCGACGAAGCTTGGTGGATATTCTTCTCGACTTGAAGGAC ACCTGAAGTCTGACATTCTACTCTCTCCATTCGAAAGCTACGCAGAAATGATGCTCGGGG ATGGTACATCAAATGTCCTAAAAGGGGAATCATCCCCTCAAACTTCTGTCAAGGTCGTGT CACCTAATAAAAAGAGGGTCTCTCCCCCTCGCATTGGTACCGGATTGTCTCCGATCTGCA AGAGTGGCAGGAAGTTGATTCTCAAGTCCATCCCTTCATTCCCTTCTCTTGGTGTCGACA TTACTAACGAGGATCCAAACACTAGTTCGCTAGCTCCTTGAACACAACAAAATTTAGTGC TTGAGGTTATATCCTTGTTTATTTATGGTTCCTCAGAGGACCAGATCGCCAACATCTCAG TCTGCATCAGGGTTGGTTCTATCATGCTCTAAGTTTGATGATCAACCAAGGGAGTTTAGT TTCGGCAAGTTTCTGTTCAGAGGCTGAAGTTTTCCCGTGCTTTCTCGAGAGTGAAATGCC CAATAATAATCCAGTACGTGTACACGTACCAAAAGATGTCCAAAAATTACGCCCCCATCA AGAGCCTCCTGTGACAGGAGGTGTGCTAATAATTATGCCCGGACTTGTCGACTATCTGTC ATTGTTTGAGTTGCCCATCCCTGTTCGTATGTATCATTTCACGCTTCATCTGAAAGACAT CTATCATCAATGTGTTGTGTTGAAAAGAAGAGATATGTCATCTGTGTACTTTGATATTGT TATCATCTATGTAATGTACTTGGGATCAGGCTGTTAAAACTTTTATGAAAACTTTATGTA ATTGAGAACAAGCAGTTATTTATAGTACTTATGAA