Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0605300-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:25553547:25557389:-1 gene:Os12g0605300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tesmin/TSO1-like, CXC domain containing protein. (Os12t0605300-01)
Sequence	ATGTCGGCCGCGGAGGATCCCGCGAAGCCCCCGCCCCCACCCCCGCCGCAGCTCGAGGCG TCCGGATCGGACCCCGACGACCCCCTCCTCCGCGACCGCGTCGTCGTCATCGCCCCTCCC CCTCCCCCGCCACCACCACCACCACCACCAGCACCCGCCCCCGCCCTCCTCGCCCCCGCC GAGAACGCCTCCGCGGAAGCCGCCTTCGCCGTGCCGCCGGCGGCGATCGCGGCGGTGGTG GAGGCGAACGGCAACTCGGAGAAGAAGAAGAAGAGGAAGACGGATGAAGGGGAAGGGTGC AAGTCGTGCAGCTGCAAGAAATCCAAGTGCCTTAAGCTTTATTGTGTGTGTTTTGCATCT GGATCACATTGTTCTGAATCATGTGGATGTGATCCATGTTACAACAAATCTATTCATGGT GTTCCACGGAGTACACCAGCCTTGCCTTTGAAAGCTGTTCAAACATTAGAGACTGGTCAA GATTCAGTGGAACAACTTATAAGATCCCCTATGGACTTTGGTAGAAGAAAATGCACTTGC AAAAAGTCAGGCTGCCTTAAGAAATACTGTGACTGCTACCAGGGAGGAGCAGGATGCTCC ATCAACTGTAAATGTGATGATTGCAAGAACCCATATGGGAGAAAAGTTGGTGTTATTTTG GATGGTAAAAATATTCTTGCTGGACCAACACCAAATGAAAGGAATGGAACAGAAGCTGAC TCAAGTGACGATGAAGAAGATGATTATTATATGAACCGACCACTCTCGCCTGTCTCCCCA TCTCCAGTATCCAGAGAGTCTTCATTCCAACAGGAGACTTTAGTTGGCGTCGAAGTCCAG ACTATGAATGGGCATCTATACCCAAAACCGCTTACCCAAGTGCGGCCGGAATCATGGCAG CTCACTAGGAGGCCTACTGAGGAAGTGCGAGGAGAGGCATGGCACTACTTGAGGAGGCCC AGTGAGGATGGAACATCCGATGTTATGGAAGGACATGCTGACCCCAAGTTTCAGAGAGAC AATAAACAGCTGGAAAACCATGTTGATAGGTACAGCATTCCGCGGTGCATCGAGGTGATG AACGCCATGGCAGACCTCTCGCCGATCGAGAAGTCGCTCGCACCGGACGTCTTCTTGGAT CCAAGCAATCGGGAGATTTTTCTTTCACTGACTGTAGATATTCGAACCATGTGGCTGAAG CGTAAGATGAAGAGCCTTGTGTAG

Peptide Sequence

PEP ID	Os12t0605300-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:25553547:25557389:-1 gene:Os12g0605300 transcript:Os12t0605300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tesmin/TSO1-like, CXC domain containing protein. (Os12t0605300-01)
Sequence	MSAAEDPAKPPPPPPPQLEASGSDPDDPLLRDRVVVIAPPPPPPPPPPPPAPAPALLAPA ENASAEAAFAVPPAAIAAVVEANGNSEKKKKRKTDEGEGCKSCSCKKSKCLKLYCVCFAS GSHCSESCGCDPCYNKSIHGVPRSTPALPLKAVQTLETGQDSVEQLIRSPMDFGRRKCTC KKSGCLKKYCDCYQGGAGCSINCKCDDCKNPYGRKVGVILDGKNILAGPTPNERNGTEAD SSDDEEDDYYMNRPLSPVSPSPVSRESSFQQETLVGVEVQTMNGHLYPKPLTQVRPESWQ LTRRPTEEVRGEAWHYLRRPSEDGTSDVMEGHADPKFQRDNKQLENHVDRYSIPRCIEVM NAMADLSPIEKSLAPDVFLDPSNREIFLSLTVDIRTMWLKRKMKSLV

Transcript Sequence

Transcript ID	Os12t0605300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25553547:25557389:-1 gene:Os12g0605300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tesmin/TSO1-like, CXC domain containing protein. (Os12t0605300-01)
Sequence	TCTCCCCCCTCGCCGCCACGGCGAACCCCTCGCCGCCGCCACCGCCACCGCCGATCGGGC GGGAGGAGGCGTCGCCCGATCCGATGTCGGCCGCGGAGGATCCCGCGAAGCCCCCGCCCC CACCCCCGCCGCAGCTCGAGGCGTCCGGATCGGACCCCGACGACCCCCTCCTCCGCGACC GCGTCGTCGTCATCGCCCCTCCCCCTCCCCCGCCACCACCACCACCACCACCAGCACCCG CCCCCGCCCTCCTCGCCCCCGCCGAGAACGCCTCCGCGGAAGCCGCCTTCGCCGTGCCGC CGGCGGCGATCGCGGCGGTGGTGGAGGCGAACGGCAACTCGGAGAAGAAGAAGAAGAGGA AGACGGATGAAGGGGAAGGGTGCAAGTCGTGCAGCTGCAAGAAATCCAAGTGCCTTAAGC TTTATTGTGTGTGTTTTGCATCTGGATCACATTGTTCTGAATCATGTGGATGTGATCCAT GTTACAACAAATCTATTCATGGTGTTCCACGGAGTACACCAGCCTTGCCTTTGAAAGCTG TTCAAACATTAGAGACTGGTCAAGATTCAGTGGAACAACTTATAAGATCCCCTATGGACT TTGGTAGAAGAAAATGCACTTGCAAAAAGTCAGGCTGCCTTAAGAAATACTGTGACTGCT ACCAGGGAGGAGCAGGATGCTCCATCAACTGTAAATGTGATGATTGCAAGAACCCATATG GGAGAAAAGTTGGTGTTATTTTGGATGGTAAAAATATTCTTGCTGGACCAACACCAAATG AAAGGAATGGAACAGAAGCTGACTCAAGTGACGATGAAGAAGATGATTATTATATGAACC GACCACTCTCGCCTGTCTCCCCATCTCCAGTATCCAGAGAGTCTTCATTCCAACAGGAGA CTTTAGTTGGCGTCGAAGTCCAGACTATGAATGGGCATCTATACCCAAAACCGCTTACCC AAGTGCGGCCGGAATCATGGCAGCTCACTAGGAGGCCTACTGAGGAAGTGCGAGGAGAGG CATGGCACTACTTGAGGAGGCCCAGTGAGGATGGAACATCCGATGTTATGGAAGGACATG CTGACCCCAAGTTTCAGAGAGACAATAAACAGCTGGAAAACCATGTTGATAGGTACAGCA TTCCGCGGTGCATCGAGGTGATGAACGCCATGGCAGACCTCTCGCCGATCGAGAAGTCGC TCGCACCGGACGTCTTCTTGGATCCAAGCAATCGGGAGATTTTTCTTTCACTGACTGTAG ATATTCGAACCATGTGGCTGAAGCGTAAGATGAAGAGCCTTGTGTAGAGATACCATGAAA ATTTTTCATCCGCATAAAACCTGTCAAGCATGTGGTGTACTGTAGATATATCTAGTTTTC AAGAGTTCTGAACCGATGTATCTAGTCCTAACTTGGCACAGGCTATATTGCAGCCAGCAA CAATAAATTCATATGATCTTCAGGCTTCAGCT