Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0604800-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:25528386:25532732:-1 gene:Os12g0604800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os12t0604800-01)
Sequence

ATGGCGGAGGGTGGCGGCGGAGGAGGAGGGTCGGCGGCGTCGGCGGCGCTGAAGGATCAG
GGGAACGAGCAGTTCAAGGCGGGGAACTACCTCAAGGCCGCCGCGCTCTACACCCAGGCC
ATCAAGCTCGACCCCGACAACCCCACCCTCTATAGCAATCGGGCTGCTGCATTTCTCCAT
CTAGTTAAGCTTAATAAGGCACTCGCTGATGCTGATACGACAATAAAACTCAAGCCACAA
TGGGAAAAGGGTCATTTCAGGAAAGGGTGTGTTTTAGAGTCGATGGAACACTATGAGGAG
GCAATATCTTCTTTTCAGATAGCTTTGCAACACAATCCACAAAATACAGAAGTTTCAAGA
AAAATTAAGAGGCTTACTCAGTTGGCAAGGGAAAAGAAGCGGGCTCTTGATGTGGAGAAC
ATGCGTTCTAATGTTGATGTTGCAAAGAACTTGGATTCACTGAAAACCGAGCTGGCTGGA
AAATATGGAGATGCCGAACTGGGGCAAAGTATCTTCACTTTTGTTGTTAATGTGATTGAA
TCAGCTATAAAGGTCTGGCATGACACCGGAAAAGTAGATGCAAGAGTTAATTTTCTTCTT
GATGACCAGAAGACTGATACTGAAAAACATGCCCCAGTGGTTAACATTGACAAGGCCTTT
GACTCACCCCACACTCACAGCAGTTGCTTCACATTTTTGCGGCAATATTCCGAGGAGTCT
TTCTCAAAGGCTGCTTGTATGGTAGCACCTAAGAGCGCCATCTCGTACCCTCAGGTCTGG
AAAGGACAGGGATCAAGAAAATGGAAGCTTGACCAGAGTGATGGTTTCTTTGTGCAATTT
GAGTCACCAATTCTGCGGAAGATATGGTTTGTCCCTAGCACAACTGAAAAGGGACGAGTA
TTATGCAGGAGTCCTGAGCTCCTGGACATTAGCATCCACGAAGTGCTTCCCCGTATATTC
AAAGAAACGGCTTGA

Peptide Sequence

PEP ID

Os12t0604800-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:25528386:25532732:-1 gene:Os12g0604800 transcript:Os12t0604800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os12t0604800-01)
Sequence

MAEGGGGGGGSAASAALKDQGNEQFKAGNYLKAAALYTQAIKLDPDNPTLYSNRAAAFLH
LVKLNKALADADTTIKLKPQWEKGHFRKGCVLESMEHYEEAISSFQIALQHNPQNTEVSR
KIKRLTQLAREKKRALDVENMRSNVDVAKNLDSLKTELAGKYGDAELGQSIFTFVVNVIE
SAIKVWHDTGKVDARVNFLLDDQKTDTEKHAPVVNIDKAFDSPHTHSSCFTFLRQYSEES
FSKAACMVAPKSAISYPQVWKGQGSRKWKLDQSDGFFVQFESPILRKIWFVPSTTEKGRV
LCRSPELLDISIHEVLPRIFKETA

Transcript Sequence

Transcript ID

Os12t0604800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:25528386:25532732:-1 gene:Os12g0604800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os12t0604800-01)
Sequence

GAGAGGTGAGGTGGCACGCGTGAGAGTGAGGAGCTCGCGAACTCCAAAACCCTAACCCTC
TCGGAGCTTCACATCGGCGGCGGCGGCGGCGATGGCGGAGGGTGGCGGCGGAGGAGGAGG
GTCGGCGGCGTCGGCGGCGCTGAAGGATCAGGGGAACGAGCAGTTCAAGGCGGGGAACTA
CCTCAAGGCCGCCGCGCTCTACACCCAGGCCATCAAGCTCGACCCCGACAACCCCACCCT
CTATAGCAATCGGGCTGCTGCATTTCTCCATCTAGTTAAGCTTAATAAGGCACTCGCTGA
TGCTGATACGACAATAAAACTCAAGCCACAATGGGAAAAGGGTCATTTCAGGAAAGGGTG
TGTTTTAGAGTCGATGGAACACTATGAGGAGGCAATATCTTCTTTTCAGATAGCTTTGCA
ACACAATCCACAAAATACAGAAGTTTCAAGAAAAATTAAGAGGCTTACTCAGTTGGCAAG
GGAAAAGAAGCGGGCTCTTGATGTGGAGAACATGCGTTCTAATGTTGATGTTGCAAAGAA
CTTGGATTCACTGAAAACCGAGCTGGCTGGAAAATATGGAGATGCCGAACTGGGGCAAAG
TATCTTCACTTTTGTTGTTAATGTGATTGAATCAGCTATAAAGGTCTGGCATGACACCGG
AAAAGTAGATGCAAGAGTTAATTTTCTTCTTGATGACCAGAAGACTGATACTGAAAAACA
TGCCCCAGTGGTTAACATTGACAAGGCCTTTGACTCACCCCACACTCACAGCAGTTGCTT
CACATTTTTGCGGCAATATTCCGAGGAGTCTTTCTCAAAGGCTGCTTGTATGGTAGCACC
TAAGAGCGCCATCTCGTACCCTCAGGTCTGGAAAGGACAGGGATCAAGAAAATGGAAGCT
TGACCAGAGTGATGGTTTCTTTGTGCAATTTGAGTCACCAATTCTGCGGAAGATATGGTT
TGTCCCTAGCACAACTGAAAAGGGACGAGTATTATGCAGGAGTCCTGAGCTCCTGGACAT
TAGCATCCACGAAGTGCTTCCCCGTATATTCAAAGAAACGGCTTGAATAAACAACAAATG
GACAGTGAATGGCTCCCAAATTCTTCCCCTGTTGTGGTCATATTCTTTCCTAGCTTACAG
TTGCAAAGGGGATATTTTTCATAGCGTGGTGAGAGCTTAGATTTGCATGCCAGATTTTGT
AAGCTGTTGATCTGTATTGTACACCGAGGCACACAAATTTTGCTGATCTGGTTTTTTAAT
TATATATGCCTTAAGTGGTGCAATTTCCATTGT