Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0604700-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:25518238:25520230:-1 gene:Os12g0604700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NIMA-related kinase 2 description:Similar to LSTK-1-like kinase. (Os12t0604700-01);Similar to cDNA clone:J023075D08, full insert sequence. (Os12t0604700-02)
Sequence	GACATGCAAGCGCTGATTAACAAGATCACGAAATCAATAGTCTCACCATTACCCACTAAA TATTCTGGTGCCTTTAGGGGACTTATTAAGAGCATGCTGCGGAAAAGTCCAGAGCACAGA CCTAGTGCTGCACAGCTACTCAAGCATCCACAACTTCAGCCTTATGTGCTGCAAGTCCAA TTGAAATCTAGTCCTACTCGCAACATACTTCCAATCCATCAATCTTTGACTGACAAAGTT AAGAAGATGACATTTCCTAGTGACGTGGTTGATTCTGCACGCAGAAGAATGGCCAGGAGG AACTCTCTGGGAAATGAGAGGACTGTGACATTTAGCAAGCCATCTCCGGAACGGAATTCA GTTAGCTCTACACGGAGCATCAAAGAATACACAACCACCCAGAGTGTCAAAGGGCTCTCT GTTGACAGTAGTGAGGCTGGGGATGAGGTTACCAGTAAAGCCATCATAACAAAGACATCA AGCATCCTAAGGACGCCCAAGAGCTTGCCAGCCAAGACTTATACAGCTAGAAATCAGCTT GAACCTCCCAAAACATCGTATAACAGAACATACCGCTCTGAGCTGCCCTCAAAAACAACT CCAAACAAAATTGCCCGACCAGCAAGAAGAGCATCACTCCCGCTGTCAACATATGAAACA CCCACCAAGCGCAGCATCAGCATTCTGGAACAACTAGACTCCCCTGACGTCTCTGTGAAT GCCCCTCGAATCGACAGAATTGCGGAATTCCCACTGGCATCGTCTGAGGACCCCTTGCTC CCCATCCACAACAAGCTCTCTCCTGGCCATGGCTCATGTTCCACTCCTCCCTTTATCAAC CGGTCAATCACCAAGGACAAATGCACGATCCAGGTGTTACGCACCGATGGGGACAACGGG AGCGACTCCTCAGGCCGCAACGCCACTGCTGCCTCGAGCCGCGGATCCAATGACTCCAGG CAGCAGCGGTTCGACACCTCGTCGTTCCAGCAGCGTGCCGAGGCATTGGAAGGGCTGCTG GAGTTCAGCGCGCAGCTGCTGCAGCAGGAGAGGTATGAGGAGCTGGGCATTCTGCTGAAG CCATTCGGACCGGAGAAAGCGTCTCCCAGGGAGACGGCCATCTGGCTCACAAAGAGCTTC AAGGAGACGGCATCATAG

Peptide Sequence

PEP ID	Os12t0604700-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:25518238:25520230:-1 gene:Os12g0604700 transcript:Os12t0604700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NIMA-related kinase 2 description:Similar to LSTK-1-like kinase. (Os12t0604700-01);Similar to cDNA clone:J023075D08, full insert sequence. (Os12t0604700-02)
Sequence	DMQALINKITKSIVSPLPTKYSGAFRGLIKSMLRKSPEHRPSAAQLLKHPQLQPYVLQVQ LKSSPTRNILPIHQSLTDKVKKMTFPSDVVDSARRRMARRNSLGNERTVTFSKPSPERNS VSSTRSIKEYTTTQSVKGLSVDSSEAGDEVTSKAIITKTSSILRTPKSLPAKTYTARNQL EPPKTSYNRTYRSELPSKTTPNKIARPARRASLPLSTYETPTKRSISILEQLDSPDVSVN APRIDRIAEFPLASSEDPLLPIHNKLSPGHGSCSTPPFINRSITKDKCTIQVLRTDGDNG SDSSGRNATAASSRGSNDSRQQRFDTSSFQQRAEALEGLLEFSAQLLQQERYEELGILLK PFGPEKASPRETAIWLTKSFKETAS

Transcript Sequence

Transcript ID	Os12t0604700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25518238:25520230:-1 gene:Os12g0604700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NIMA-related kinase 2 description:Similar to LSTK-1-like kinase. (Os12t0604700-01);Similar to cDNA clone:J023075D08, full insert sequence. (Os12t0604700-02)
Sequence	GACATGCAAGCGCTGATTAACAAGATCACGAAATCAATAGTCTCACCATTACCCACTAAA TATTCTGGTGCCTTTAGGGGACTTATTAAGAGCATGCTGCGGAAAAGTCCAGAGCACAGA CCTAGTGCTGCACAGCTACTCAAGCATCCACAACTTCAGCCTTATGTGCTGCAAGTCCAA TTGAAATCTAGTCCTACTCGCAACATACTTCCAATCCATCAATCTTTGACTGACAAAGTT AAGAAGATGACATTTCCTAGTGACGTGGTTGATTCTGCACGCAGAAGAATGGCCAGGAGG AACTCTCTGGGAAATGAGAGGACTGTGACATTTAGCAAGCCATCTCCGGAACGGAATTCA GTTAGCTCTACACGGAGCATCAAAGAATACACAACCACCCAGAGTGTCAAAGGGCTCTCT GTTGACAGTAGTGAGGCTGGGGATGAGGTTACCAGTAAAGCCATCATAACAAAGACATCA AGCATCCTAAGGACGCCCAAGAGCTTGCCAGCCAAGACTTATACAGCTAGAAATCAGCTT GAACCTCCCAAAACATCGTATAACAGAACATACCGCTCTGAGCTGCCCTCAAAAACAACT CCAAACAAAATTGCCCGACCAGCAAGAAGAGCATCACTCCCGCTGTCAACATATGAAACA CCCACCAAGCGCAGCATCAGCATTCTGGAACAACTAGACTCCCCTGACGTCTCTGTGAAT GCCCCTCGAATCGACAGAATTGCGGAATTCCCACTGGCATCGTCTGAGGACCCCTTGCTC CCCATCCACAACAAGCTCTCTCCTGGCCATGGCTCATGTTCCACTCCTCCCTTTATCAAC CGGTCAATCACCAAGGACAAATGCACGATCCAGGTGTTACGCACCGATGGGGACAACGGG AGCGACTCCTCAGGCCGCAACGCCACTGCTGCCTCGAGCCGCGGATCCAATGACTCCAGG CAGCAGCGGTTCGACACCTCGTCGTTCCAGCAGCGTGCCGAGGCATTGGAAGGGCTGCTG GAGTTCAGCGCGCAGCTGCTGCAGCAGGAGAGGTATGAGGAGCTGGGCATTCTGCTGAAG CCATTCGGACCGGAGAAAGCGTCTCCCAGGGAGACGGCCATCTGGCTCACAAAGAGCTTC AAGGAGACGGCATCATAGCGCCACCTTGTATCAGGCGCGTCTAAAATCGCCAGTTTTGTC ATGTGCAATATTAGCTCAGGTAGTGGTAAACAATATTTAGGATTTGAGACTTTTAGCTGT TGGGAGGCAGCACCATCTCAGTGTTGCTGTTAACTCAAAATCTACTTCTAGCTCTAGCTA GTTTCCAGTTTTTTACTTTCTATTAGGAATCAGCAATCAGCAGCAGGAGTTGTAGTAGTA GAACTGTAAGTTAAGCTGAAGATCTTGCAAGATCTTAGAACCTTTGTAATCATGTGGCAC CTGCAATCATGTAGTGATATAAATGTGGGGTTAAGG