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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0601800-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:25332774:25336537:1 gene:Os12g0601800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:b-ZIP TRANSCRIPTION FACTOR 88 description:Similar to BZIP transcription factor family protein, expressed. (Os12t0601800-01)
Sequence

ATGGCCTTCCAGCTGGAAGCTAAACTGCAAGAATCTTCTTTGGGCTACCTCAATTTACAA
GCCTCAGACACTTCACAATTGGTTTCTCAAGATTCTTTTAATGGCTATGGATCAACCAGA
GTAACAAACTCAAATGCCATACATGAAGATGACGATCAAGGTAAACCAGCTAATAGTGGT
ACATCAAAGGAACAGTCAGATGATGATGGCGATCTTGAGGAAGATACGGACCCCGTTAAT
GCAAAGCGGACAAGGAGAATGCTGTCAAATCGGGAATCAGCCAGGAGGTCAAGAAAAAGG
AAGCAAGCTCACCTAAACGATCTAGAATCACAGGTTTCCCAGTTAAGATCTGAGAATGCA
TCTCTGCAAAAGCGCTTGTCTGACATGACTCAGAAATATAAGCAATCTACCACAGAATAT
GGCAATCTTCAAGATGACATGAACGCTATGAGGAGAAAGGTGAATATAGCTGAAGAAGCG
GTGAGGAGAGTAACTGGAATAGGACTTCAATTGTTCACTACATCTGAAATGCCTGCAAGC
AGCATGCCCGTTTCTTCAGGTGTATCAGACGCAGCTTCTGCTGCTGCTGCTGCTGCTCTC
GTCGAAGACGACTGGACAAACTGTAGCCTCCCAGATGAAGCAATTCCTGTGCCAAGTGCA
GCAATGGCCTTGAGGTCACCGTCCGTGCGGCGTGTCGCAAGCTTGGAGAACCTGCAGAAG
AGAATCCATGCTGGAGATGTGACACATTTTGAGGCAGCATCAGCCTTGTCATTGCCTGAA
GCTACTGCCTGTGATAATAAGTAG

Peptide Sequence

PEP ID

Os12t0601800-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:25332774:25336537:1 gene:Os12g0601800 transcript:Os12t0601800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:b-ZIP TRANSCRIPTION FACTOR 88 description:Similar to BZIP transcription factor family protein, expressed. (Os12t0601800-01)
Sequence

MAFQLEAKLQESSLGYLNLQASDTSQLVSQDSFNGYGSTRVTNSNAIHEDDDQGKPANSG
TSKEQSDDDGDLEEDTDPVNAKRTRRMLSNRESARRSRKRKQAHLNDLESQVSQLRSENA
SLQKRLSDMTQKYKQSTTEYGNLQDDMNAMRRKVNIAEEAVRRVTGIGLQLFTTSEMPAS
SMPVSSGVSDAASAAAAAALVEDDWTNCSLPDEAIPVPSAAMALRSPSVRRVASLENLQK
RIHAGDVTHFEAASALSLPEATACDNK

Transcript Sequence

Transcript ID

Os12t0601800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:25332774:25336537:1 gene:Os12g0601800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:b-ZIP TRANSCRIPTION FACTOR 88 description:Similar to BZIP transcription factor family protein, expressed. (Os12t0601800-01)
Sequence

AGTTTCGAGCATCAGACAGGGTTCTGTGTTTTCACAACCCGTTTTAGGGATTATTGGTCC
ACGGCAATAATCGGACAGAAAAAGTCTAAATTTAAGTTTAAAATTCAAAGTTTGAATTCG
AATTCATGGCCTTCCAGCTGGAAGCTAAACTGCAAGAATCTTCTTTGGGCTACCTCAATT
TACAAGCCTCAGACACTTCACAATTGGTTTCTCAAGATTCTTTTAATGGCTATGGATCAA
CCAGAGTAACAAACTCAAATGCCATACATGAAGATGACGATCAAGGTAAACCAGCTAATA
GTGGTACATCAAAGGAACAGTCAGATGATGATGGCGATCTTGAGGAAGATACGGACCCCG
TTAATGCAAAGCGGACAAGGAGAATGCTGTCAAATCGGGAATCAGCCAGGAGGTCAAGAA
AAAGGAAGCAAGCTCACCTAAACGATCTAGAATCACAGGTTTCCCAGTTAAGATCTGAGA
ATGCATCTCTGCAAAAGCGCTTGTCTGACATGACTCAGAAATATAAGCAATCTACCACAG
AATATGGCAATCTTCAAGATGACATGAACGCTATGAGGAGAAAGGTGAATATAGCTGAAG
AAGCGGTGAGGAGAGTAACTGGAATAGGACTTCAATTGTTCACTACATCTGAAATGCCTG
CAAGCAGCATGCCCGTTTCTTCAGGTGTATCAGACGCAGCTTCTGCTGCTGCTGCTGCTG
CTCTCGTCGAAGACGACTGGACAAACTGTAGCCTCCCAGATGAAGCAATTCCTGTGCCAA
GTGCAGCAATGGCCTTGAGGTCACCGTCCGTGCGGCGTGTCGCAAGCTTGGAGAACCTGC
AGAAGAGAATCCATGCTGGAGATGTGACACATTTTGAGGCAGCATCAGCCTTGTCATTGC
CTGAAGCTACTGCCTGTGATAATAAGTAGTAACAGCAGGTATACTGATACTGCTCTAAAA
CCAGCTTCTGGTGCTCTGGCGTATTAAGGTTTTTGGTAATGCTAGAATGACTTACATTGT
GATATATATGTCTAGAATGACTTACATTGTGAAACGGAGGGAGTATCATTGTATTGAGTC
ATATAAAGTTATAAATTGTCTTGGCCC