Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0600200-03
CDS Infomation	cds chromosome:IRGSP-1.0:12:25247754:25250814:-1 gene:Os12g0600200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C3HC4 type family protein, expressed. (Os12t0600200-01);Similar to Zinc finger, C3HC4 type (RING finger) containing protein. (Os12t0600200-02);Similar to Zinc finger, C3HC4 type (RING finger) containing protein. (Os12t0600200-03)
Sequence	AGAGCTGATCACAATATACAAGATGTGAGGTCAAAAATATTTCCATTGAAAAGAAAGAAG GTTAATGCTGAAGAGGTTGAATCTCCTATTGCGCCGCCTGCTAAAAGGAAAGAGAGATCT ATCTCTTCATTGGTGGTCAATACACCTGAAATAACACCAAAGAGTTTGACAGGGCGCCGA ACAAGGGCATCTACCAGGAAGTCTGCTGCCGCATTACGTGACCTTGGTCCTATCATTCCT CCTGTGAAAAAGGATAGTGATAACACCAATAAGAATGCTGATAATTCAAGCTTGCTGGAC AGCTTGAGCAAAGTACCTCAAACAAGAAGACAGGTATTGTCAAATGCGGAAACATCGAGT CATCCCTCCAGTAAAGATAAAGGAGGTGACGATAAGGACTTGGACAAGTCAGAGCTCTGG AGACCTTTAAATTGTCTTGTAGAGGCTGCAAGCAAAACAAAGTCCTATAGATCAAGTTCA GCTGCTAGGGGAAATCAGCCCACTGAATCTCCTAGTAGTGCAAATGCTAGCAGAACTAAG GCTAGGGAGTATCTGCTTAAGTCCAAAGTTCAAGATGAGAAGAAAGAAGTTCCTGTGGCA ACAGTTCCGTTTAAAAGGAAAGGACCTGGCCGGGGGAGGAAACCTGCACAACCCCCAGCC GCTGCAGTGTCTAGTCATTCAGCTAGCAAGCATGAAAAATTATTAACCCCTGTATGGTTT TCATTGATTGCATCATTTGACCAGAAAGGTGCTCCACCCTTGCCGCAGATACCAACCCAT TATTTGAGAATAAAAGATGACAATATGCCCGCGTCATCCATCCAAAAGTATATCATGCAG AAGCTCAGTCTTCCAAGTGAGACTGAGGTTGAAATAAGCTGCTGCGGTCAGCCAGTGAAC CCAATTCAACCCCTGCGCAATTTAATAGAGCGGTGGCTGAGGTTCGGCCCAGCTCGCACC TTGCAGACTGTGGTCGGCTCCTCCGGGGGAGACTATGTGATGGTGATATCCTACGGGCGG CCAAAGGCCGCATAG

Peptide Sequence

PEP ID	Os12t0600200-03
PEP Infomation	pep chromosome:IRGSP-1.0:12:25247754:25250814:-1 gene:Os12g0600200 transcript:Os12t0600200-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C3HC4 type family protein, expressed. (Os12t0600200-01);Similar to Zinc finger, C3HC4 type (RING finger) containing protein. (Os12t0600200-02);Similar to Zinc finger, C3HC4 type (RING finger) containing protein. (Os12t0600200-03)
Sequence	RADHNIQDVRSKIFPLKRKKVNAEEVESPIAPPAKRKERSISSLVVNTPEITPKSLTGRR TRASTRKSAAALRDLGPIIPPVKKDSDNTNKNADNSSLLDSLSKVPQTRRQVLSNAETSS HPSSKDKGGDDKDLDKSELWRPLNCLVEAASKTKSYRSSSAARGNQPTESPSSANASRTK AREYLLKSKVQDEKKEVPVATVPFKRKGPGRGRKPAQPPAAAVSSHSASKHEKLLTPVWF SLIASFDQKGAPPLPQIPTHYLRIKDDNMPASSIQKYIMQKLSLPSETEVEISCCGQPVN PIQPLRNLIERWLRFGPARTLQTVVGSSGGDYVMVISYGRPKAA

Transcript Sequence

Transcript ID	Os12t0600200-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25247754:25250814:-1 gene:Os12g0600200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C3HC4 type family protein, expressed. (Os12t0600200-01);Similar to Zinc finger, C3HC4 type (RING finger) containing protein. (Os12t0600200-02);Similar to Zinc finger, C3HC4 type (RING finger) containing protein. (Os12t0600200-03)
Sequence	AGAGCTGATCACAATATACAAGATGTGAGGTCAAAAATATTTCCATTGAAAAGAAAGAAG GTTAATGCTGAAGAGGTTGAATCTCCTATTGCGCCGCCTGCTAAAAGGAAAGAGAGATCT ATCTCTTCATTGGTGGTCAATACACCTGAAATAACACCAAAGAGTTTGACAGGGCGCCGA ACAAGGGCATCTACCAGGAAGTCTGCTGCCGCATTACGTGACCTTGGTCCTATCATTCCT CCTGTGAAAAAGGATAGTGATAACACCAATAAGAATGCTGATAATTCAAGCTTGCTGGAC AGCTTGAGCAAAGTACCTCAAACAAGAAGACAGGTATTGTCAAATGCGGAAACATCGAGT CATCCCTCCAGTAAAGATAAAGGAGGTGACGATAAGGACTTGGACAAGTCAGAGCTCTGG AGACCTTTAAATTGTCTTGTAGAGGCTGCAAGCAAAACAAAGTCCTATAGATCAAGTTCA GCTGCTAGGGGAAATCAGCCCACTGAATCTCCTAGTAGTGCAAATGCTAGCAGAACTAAG GCTAGGGAGTATCTGCTTAAGTCCAAAGTTCAAGATGAGAAGAAAGAAGTTCCTGTGGCA ACAGTTCCGTTTAAAAGGAAAGGACCTGGCCGGGGGAGGAAACCTGCACAACCCCCAGCC GCTGCAGTGTCTAGTCATTCAGCTAGCAAGCATGAAAAATTATTAACCCCTGTATGGTTT TCATTGATTGCATCATTTGACCAGAAAGGTGCTCCACCCTTGCCGCAGATACCAACCCAT TATTTGAGAATAAAAGATGACAATATGCCCGCGTCATCCATCCAAAAGTATATCATGCAG AAGCTCAGTCTTCCAAGTGAGACTGAGGTTGAAATAAGCTGCTGCGGTCAGCCAGTGAAC CCAATTCAACCCCTGCGCAATTTAATAGAGCGGTGGCTGAGGTTCGGCCCAGCTCGCACC TTGCAGACTGTGGTCGGCTCCTCCGGGGGAGACTATGTGATGGTGATATCCTACGGGCGG CCAAAGGCCGCATAGTCTTGAAACGAACCATCTTCAGATGTCCCACCTGTCGACGATCAC CGGATTTGGCACAAGGTCGTGAAGTTCCGCCACCCGGGAAAACATATCACCATATATGGG AGGAGGATTCTCTTCTCCCCTGATGACATATACTCAAAAGAAAGCGGCTGTGCCATACTC AAAGCTCCCCTTCCCTCCATTGATGCTGTTGAATGCTGCTCCATTCTGGCAGAATTTGTT AGTTTTTTTTTTCGTTCTTGATATACAGGTAAATTTAAAGTTGCTGTAATTTGGTAGGCG CAGAGAAAACTGGTGTTTAGGTTGGTCAAAGAGAGGATACATAATGTCAGTTTTAGCTGC TCTTCCCTTGGAAGGGATTAAATTGGCTTCAGTTTTTAGTGGACTGCAGCTTGGTTGTAT CCTGGATTAATGTTAAACTGATGTGGTACTAGACTGAAAATTGCTTCCAAATCCTAAACC