Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0600100-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:25242398:25246733:1 gene:Os12g0600100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os12t0600100-01)
Sequence	ATGGCCCCCTCCCCTTCCGACGTCGCCCTGCAGGCCGCCCAGGACGGCAACCTCCGCCTC CTCAGGAAGATGGCGAAGAAGTTGGATTTGCGAGGAGTCAAGGACAAGAATGGCCTAAGC GCGCTTCACTTCGCTGCAAGCCATGGGCACCTGGATTGCTGCAAGTTCCTTGTGGAGGAA TCGGGCCTTGATGTCAACTCGGTTGGTCACAAAGGTGAAACGCCAGTGTTCTATGCCGCG ATCGATGGGAACGTTCAGGTTTTGGGGTACCTTCTTGATCATGGTGGTGACCCGGTGAAA CCCGAGGAGAGGGGCTGCACGCCGCTGCACAATGCGGCAGAGAATGGGCATGATGAGGCT GTAAGACTATTGCTGTCCAAAGGAGTTCATGTGGATCCTCTGAATTATCGTGGGGCCCCA CTGCACTTGGCTGCCTCAAAGGACCGGGTTCAAGCCATGAAGGTTCTGCTTGAACATGGT GCTGATCCCAACAGAGTTGTCAATCATATCTTTTCACCACTCATGATGGCATGCTGCGGG CACTCCTTGAAATGCGTGAAGCTACTTGTTGAGGCTGGCGCTGATGTGAACGGGGCTGGA GCTGACCCTAACATTCCTGACGAGGAAGGGAGGATTCCTATCATGGTGGCAGCAGCTCGT GGTCAACGAGAGCTTGTTGAAATTCTATTTCCTCGGACAAAACCTATTCCATGTCTGCCA GATTGGAATGTTGACGGGATAATTAGAACTATGAGAACCACACGTATTGAACCTCAGTCT GCTATTCCTGTGGAAGAACAAGTGTCTGATGCAAAGTCGAAAGGAAAGGAAGCATTTGCA AAGGGTGACTACCTTACAGCCATCTACTTCTACACCCTGGCAATGGATAAATCCCCACTT GATGCCACCTTGTTTGCCAACCGGAGCCTTTGCTGGCTGCGGCAGCGAGAAGGGGACAGA GCTTTACTGGATGCACAGCAGTGCAGGATGCTGCGCCCTGGTTGGTCCAAGGCATGGTAC CGTGAGGGCGCAGCTCTCAGTTTCATGAAGGACTACAAAGGAGCAGTGGACGCATTCGGG GAGGCACTGAAACTTGACCCCATGAGCGACGAGGTCAAGAACGCGTTAAGGGAGGCGATC GAGTGTCTGAAGAGAGCTGCTTGA

Peptide Sequence

PEP ID	Os12t0600100-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:25242398:25246733:1 gene:Os12g0600100 transcript:Os12t0600100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os12t0600100-01)
Sequence	MAPSPSDVALQAAQDGNLRLLRKMAKKLDLRGVKDKNGLSALHFAASHGHLDCCKFLVEE SGLDVNSVGHKGETPVFYAAIDGNVQVLGYLLDHGGDPVKPEERGCTPLHNAAENGHDEA VRLLLSKGVHVDPLNYRGAPLHLAASKDRVQAMKVLLEHGADPNRVVNHIFSPLMMACCG HSLKCVKLLVEAGADVNGAGADPNIPDEEGRIPIMVAAARGQRELVEILFPRTKPIPCLP DWNVDGIIRTMRTTRIEPQSAIPVEEQVSDAKSKGKEAFAKGDYLTAIYFYTLAMDKSPL DATLFANRSLCWLRQREGDRALLDAQQCRMLRPGWSKAWYREGAALSFMKDYKGAVDAFG EALKLDPMSDEVKNALREAIECLKRAA

Transcript Sequence

Transcript ID	Os12t0600100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25242398:25246733:1 gene:Os12g0600100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os12t0600100-01)
Sequence	TTTCCACCCGCTTCCTCTCCTCTCCAAAACCCTCCCCAAAAACCACGCCCCCGCCTTCCA GAACCTTCTGGAACCGCGATGGCCCCCTCCCCTTCCGACGTCGCCCTGCAGGCCGCCCAG GACGGCAACCTCCGCCTCCTCAGGAAGATGGCGAAGAAGTTGGATTTGCGAGGAGTCAAG GACAAGAATGGCCTAAGCGCGCTTCACTTCGCTGCAAGCCATGGGCACCTGGATTGCTGC AAGTTCCTTGTGGAGGAATCGGGCCTTGATGTCAACTCGGTTGGTCACAAAGGTGAAACG CCAGTGTTCTATGCCGCGATCGATGGGAACGTTCAGGTTTTGGGGTACCTTCTTGATCAT GGTGGTGACCCGGTGAAACCCGAGGAGAGGGGCTGCACGCCGCTGCACAATGCGGCAGAG AATGGGCATGATGAGGCTGTAAGACTATTGCTGTCCAAAGGAGTTCATGTGGATCCTCTG AATTATCGTGGGGCCCCACTGCACTTGGCTGCCTCAAAGGACCGGGTTCAAGCCATGAAG GTTCTGCTTGAACATGGTGCTGATCCCAACAGAGTTGTCAATCATATCTTTTCACCACTC ATGATGGCATGCTGCGGGCACTCCTTGAAATGCGTGAAGCTACTTGTTGAGGCTGGCGCT GATGTGAACGGGGCTGGAGCTGACCCTAACATTCCTGACGAGGAAGGGAGGATTCCTATC ATGGTGGCAGCAGCTCGTGGTCAACGAGAGCTTGTTGAAATTCTATTTCCTCGGACAAAA CCTATTCCATGTCTGCCAGATTGGAATGTTGACGGGATAATTAGAACTATGAGAACCACA CGTATTGAACCTCAGTCTGCTATTCCTGTGGAAGAACAAGTGTCTGATGCAAAGTCGAAA GGAAAGGAAGCATTTGCAAAGGGTGACTACCTTACAGCCATCTACTTCTACACCCTGGCA ATGGATAAATCCCCACTTGATGCCACCTTGTTTGCCAACCGGAGCCTTTGCTGGCTGCGG CAGCGAGAAGGGGACAGAGCTTTACTGGATGCACAGCAGTGCAGGATGCTGCGCCCTGGT TGGTCCAAGGCATGGTACCGTGAGGGCGCAGCTCTCAGTTTCATGAAGGACTACAAAGGA GCAGTGGACGCATTCGGGGAGGCACTGAAACTTGACCCCATGAGCGACGAGGTCAAGAAC GCGTTAAGGGAGGCGATCGAGTGTCTGAAGAGAGCTGCTTGATCTGAAGATCCGAATAAC CCTTGAGCAGCTACTGCATCGTCCTTTTGGCCTCACCTCACCTGTCAGACTGCTTCACAT CTTTCCACTGTAACTACCAACGACTAGGTTTTGCAAACCATGCTGACTGTTTAGCTATCT CTGCTGTCAGAGTACGTATGGCAGGAACATGCACTGTCTTTCGGTCAGAAACCATATGGT TTGCTAGGTCATCATCACCCATACATATGCAGTTGCACTTTCTTCCATTTTGTGCGCAAC TCATGCAAGTGCAAACTGGCAGTAATAGTATATGATATGTAAAGTTCGTCAGTTTCTGAA CTC