Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0597800-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:25116029:25119760:1 gene:Os12g0597800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 135 description:Similar to Helix-loop-helix DNA-binding domain containing protein, expressed. (Os12t0597800-01)
Sequence	ATGATGAGTTTCCCGTACAGCTCCGGCGACCTCGGCGAGGCCACCACCGCCGCCGCCGCC GCCGTTGACATGATCACGCTCGACCAGATGTTCAGAGACTATGATGCCTCCACCGGCGAC GATCTCTTCGAGTTGGTCTGGGAAAGCTGCGGCGGCGGCGAGATCGACAGCGGCGCCGGA GAGGTGCAGCCTGCTGGTGTTCCCTGCTGCCGTCGATTGCTGCCGGGATCGTCGCCGGAG CCGACCTCCGAGGACGAGATGGCGGCGTGGCTCTCCACGATTGTCACCGGCTCTGGCGGC GGCGGCGGCGACGACGTGGCTGCCGGCGGAGACCATCAAGATCCGGCGGTGAAGAAGCCC GACGGCGAGCCGTTGACGGAGAAGATGGATAAGAAGCTCCCAACAAGAACGGAAGAGAGG CGGCGCGTCAAGCACAAAGCAAGAAGAAATCCTGGATACGCAGAAACACACGGCTTAACA GAGAAGAGACGAAGGAGCAGGATAAATGAGAAGTTCAAGATGCTTCAGCGGCTCGTTCCA GGGTGCGATAAGTGTAGCCAATCCTCGACGCTGGACCGGACAATCCATTACATGAAGTCA CTGCAGCAGCAACTTCAGGCAATGTATCCGACGATGGTGAGACCAGCAGCAGTGTACCCC GTCGTGCAGCCACCGCCGGCGTTCGCCGCCGGCGGACCGCCGGCGGCGTCACAAGGCGGC CTCCACCGCCATCGCCGGCTGATGGTGGTGGTCTCCGTCCACCACCGGTGCCGGTGTTTC CGTTTGGGGCGCCAGTGA

Peptide Sequence

PEP ID	Os12t0597800-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:25116029:25119760:1 gene:Os12g0597800 transcript:Os12t0597800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 135 description:Similar to Helix-loop-helix DNA-binding domain containing protein, expressed. (Os12t0597800-01)
Sequence	MMSFPYSSGDLGEATTAAAAAVDMITLDQMFRDYDASTGDDLFELVWESCGGGEIDSGAG EVQPAGVPCCRRLLPGSSPEPTSEDEMAAWLSTIVTGSGGGGGDDVAAGGDHQDPAVKKP DGEPLTEKMDKKLPTRTEERRRVKHKARRNPGYAETHGLTEKRRRSRINEKFKMLQRLVP GCDKCSQSSTLDRTIHYMKSLQQQLQAMYPTMVRPAAVYPVVQPPPAFAAGGPPAASQGG LHRHRRLMVVVSVHHRCRCFRLGRQ

Transcript Sequence

Transcript ID	Os12t0597800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25116029:25119760:1 gene:Os12g0597800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 135 description:Similar to Helix-loop-helix DNA-binding domain containing protein, expressed. (Os12t0597800-01)
Sequence	AATGCTCCAGGCTCCAGTATAAATGTCACTGACACTGAGTGAGCGAGTGAGTACACTACT CATGCATGACACTATCCTAATTAGCTTTAGCTAGCTAGATTGACGAGGCCGATCGAATTA GCATACGATCATGATGAGTTTCCCGTACAGCTCCGGCGACCTCGGCGAGGCCACCACCGC CGCCGCCGCCGCCGTTGACATGATCACGCTCGACCAGATGTTCAGAGACTATGATGCCTC CACCGGCGACGATCTCTTCGAGTTGGTCTGGGAAAGCTGCGGCGGCGGCGAGATCGACAG CGGCGCCGGAGAGGTGCAGCCTGCTGGTGTTCCCTGCTGCCGTCGATTGCTGCCGGGATC GTCGCCGGAGCCGACCTCCGAGGACGAGATGGCGGCGTGGCTCTCCACGATTGTCACCGG CTCTGGCGGCGGCGGCGGCGACGACGTGGCTGCCGGCGGAGACCATCAAGATCCGGCGGT GAAGAAGCCCGACGGCGAGCCGTTGACGGAGAAGATGGATAAGAAGCTCCCAACAAGAAC GGAAGAGAGGCGGCGCGTCAAGCACAAAGCAAGAAGAAATCCTGGATACGCAGAAACACA CGGCTTAACAGAGAAGAGACGAAGGAGCAGGATAAATGAGAAGTTCAAGATGCTTCAGCG GCTCGTTCCAGGGTGCGATAAGTGTAGCCAATCCTCGACGCTGGACCGGACAATCCATTA CATGAAGTCACTGCAGCAGCAACTTCAGGCAATGTATCCGACGATGGTGAGACCAGCAGC AGTGTACCCCGTCGTGCAGCCACCGCCGGCGTTCGCCGCCGGCGGACCGCCGGCGGCGTC ACAAGGCGGCCTCCACCGCCATCGCCGGCTGATGGTGGTGGTCTCCGTCCACCACCGGTG CCGGTGTTTCCGTTTGGGGCGCCAGTGATTCCGTTGGTGACGATGATGATGCCTGCGGCG GCGGCGCCTCCATGGATCTATCCTTCGTCGTCCACCGGCGATCACCATCTTCTTCAGGGC TCAAGCAGTAATGGCAGCATAGCTACGATCACGAGCAGCCGTCATCGCCGGTAGCCGGCC GGCCGGCCGTCGCCGGCTAGAGCTGCCGGTTAGCAGGGCCGGCCCTGGCACTATGCAGCC GAGGCGACCGTCGGGGGCCATGATGACGGGGGCCATAATGGTGGGGGTGCCAACACCTAA TCCTAGTAATCTAGTACCTCATCCAATGTTGAGATCAATGATTTTTATTCGGAATTAAAG GTGTTGCAAGTGAGTTTATCAGATTCTTCGATGTCCGCACCTGGGATTCTGAAGTTTTTT ATGGATGCGGATTTCTATAAAAATGTTTCAGTTGCCTATCGAATTCTCTTAACCGTACAT GTGACGGTAGCTTCAGCTGAAAGAAGTTTCTCAAAATTAAAGTTGTTGAAGAACTATTTG AGATCAACTAAGTCGCAAGAAAGGTTAAATGGCTTGACTATGTGCTTAATCAAGAAGGAT ATCTTGGACACTATTGATCTTAATACCGTTCTTGATGATTTTGCATCAAGAAATGCCCGA AGAAGTATCTTTTCATAGGAAGCAATGGATATGATAGGGTTCTATTCTTTATTAAGTTAA TGAATAATGATATTAGTTCCAAGTTACAAAT