Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0597500-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:25087027:25091564:-1 gene:Os12g0597500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UREIDOGLYCOLATE AMIDOHYDROLASE description:Peptidase M20 domain containing protein. (Os12t0597500-01);Similar to Amidase, hydantoinase/carbamoylase family protein, expressed. (Os12t0597500-02)
Sequence

TCAGCCGCCACTGCCGTCGCGTCGTCTCCAACCTCCTCGCCTTCGCCTCCACCCAGCCAT
GGCGACGAGCGCCGCCGCGCGCTTCCTCGCGTTCTGTACAGCGACAAGGACGTGCAAGCT
CGAAGGTATATAAAGGGAATAATGAATCAGCTTGGCCTGTCCATTCGTGAAGACGCTGTT
GGCAACATTTTTGGGCGCTGGGAGGGTTCTGAGGCAGGACTAGGAGCGGTTGCAACTGGT
TCTCATGTTGACGCAATCCCATTCTCAGGCAAATATGATGGGGTGGTTGGTGTCCTGGGT
GCTCTTGAGGCAATTAGAATGCTGAAAAGGTCTGGTTTCCAGCCAAAAAGATCTTTGGAG
GTTATTATGTTTACATCGGAGGAGCCTACAAGATTTGGAATTAGCTGCTTGGGAAGCCGC
CTAATGGCAGGGAGTGAAGAACTGGCTCGATCCCTCAAAGAAACAGTTGACAATCAGAAT
GTGTCATTTTTTGATGCTGCAGACTCTGCTGGCTACAAGATGCATCCTGAGGAGCTACAT
AATGTGTTTTTGAAGAAAGACGACTATTTTGCTTTTGTAGAATTGCACATTGAACAGGGC
CCCATTTTGGAAAAAGAAGGTATCAAAATTGGCGTTGTCACTGCTATTGCTGCTCCTGCA
AGTATTAAGGTGGAGTTTGAAGGGAATGGGGGCCATGCTGGAGCAGTGCTCATGCCTGCA
AGAAATGATGCTGGACTGGCGGCAGCTGAGTTGGCATTAGCAGTTGAGAAACACGTTTTG
GAATCAGGATCAATTGATACTGTTGGGACAGTTGGTATTCTGCAGCTACATCCAGGAGCA
ATCAATAGCATCCCAAGTAAATCGCATGTGGAAATTGATGTGAGAGACATTGATGAGAAG
AGGAGGAATAATGTCATTGAGAAGGTTCACCAATCCGCAATTGAGATATCAAAGAACCGT
GGCGTGCTATTATCAGAGTTCAAGATCATAAATCAGGATCCACCTGCTCTATCTGACAAA
TCAGTCATCAGCGCAATGGAATTTGCTGCAAAACAGTTGAACCTCGAATATAAGCTGATG
ATTAGCAGAGCTTATCATGATTCACTCTTCATGGCCAGAATATCACCAATGGGTATGATC
TTCATTCCATGTTACAAAGGTTACAGCCACAAGCCCGAAGAATATGCGTCACCAGAGGAC
ATGGCGAACGGTGTGAAGGTGCTTGCCTTGGCAATGGCCAGATTATCCCTGCAGTGA

Peptide Sequence

PEP ID

Os12t0597500-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:25087027:25091564:-1 gene:Os12g0597500 transcript:Os12t0597500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UREIDOGLYCOLATE AMIDOHYDROLASE description:Peptidase M20 domain containing protein. (Os12t0597500-01);Similar to Amidase, hydantoinase/carbamoylase family protein, expressed. (Os12t0597500-02)
Sequence

SAATAVASSPTSSPSPPPSHGDERRRALPRVLYSDKDVQARRYIKGIMNQLGLSIREDAV
GNIFGRWEGSEAGLGAVATGSHVDAIPFSGKYDGVVGVLGALEAIRMLKRSGFQPKRSLE
VIMFTSEEPTRFGISCLGSRLMAGSEELARSLKETVDNQNVSFFDAADSAGYKMHPEELH
NVFLKKDDYFAFVELHIEQGPILEKEGIKIGVVTAIAAPASIKVEFEGNGGHAGAVLMPA
RNDAGLAAAELALAVEKHVLESGSIDTVGTVGILQLHPGAINSIPSKSHVEIDVRDIDEK
RRNNVIEKVHQSAIEISKNRGVLLSEFKIINQDPPALSDKSVISAMEFAAKQLNLEYKLM
ISRAYHDSLFMARISPMGMIFIPCYKGYSHKPEEYASPEDMANGVKVLALAMARLSLQ

Transcript Sequence

Transcript ID

Os12t0597500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:25087027:25091564:-1 gene:Os12g0597500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UREIDOGLYCOLATE AMIDOHYDROLASE description:Peptidase M20 domain containing protein. (Os12t0597500-01);Similar to Amidase, hydantoinase/carbamoylase family protein, expressed. (Os12t0597500-02)
Sequence

GTCAGCCGCCACTGCCGTCGCGTCGTCTCCAACCTCCTCGCCTTCGCCTCCACCCAGCCA
TGGCGACGAGCGCCGCCGCGCGCTTCCTCGCGTTCTGTACAGCGACAAGGACGTGCAAGC
TCGAAGGTATATAAAGGGAATAATGAATCAGCTTGGCCTGTCCATTCGTGAAGACGCTGT
TGGCAACATTTTTGGGCGCTGGGAGGGTTCTGAGGCAGGACTAGGAGCGGTTGCAACTGG
TTCTCATGTTGACGCAATCCCATTCTCAGGCAAATATGATGGGGTGGTTGGTGTCCTGGG
TGCTCTTGAGGCAATTAGAATGCTGAAAAGGTCTGGTTTCCAGCCAAAAAGATCTTTGGA
GGTTATTATGTTTACATCGGAGGAGCCTACAAGATTTGGAATTAGCTGCTTGGGAAGCCG
CCTAATGGCAGGGAGTGAAGAACTGGCTCGATCCCTCAAAGAAACAGTTGACAATCAGAA
TGTGTCATTTTTTGATGCTGCAGACTCTGCTGGCTACAAGATGCATCCTGAGGAGCTACA
TAATGTGTTTTTGAAGAAAGACGACTATTTTGCTTTTGTAGAATTGCACATTGAACAGGG
CCCCATTTTGGAAAAAGAAGGTATCAAAATTGGCGTTGTCACTGCTATTGCTGCTCCTGC
AAGTATTAAGGTGGAGTTTGAAGGGAATGGGGGCCATGCTGGAGCAGTGCTCATGCCTGC
AAGAAATGATGCTGGACTGGCGGCAGCTGAGTTGGCATTAGCAGTTGAGAAACACGTTTT
GGAATCAGGATCAATTGATACTGTTGGGACAGTTGGTATTCTGCAGCTACATCCAGGAGC
AATCAATAGCATCCCAAGTAAATCGCATGTGGAAATTGATGTGAGAGACATTGATGAGAA
GAGGAGGAATAATGTCATTGAGAAGGTTCACCAATCCGCAATTGAGATATCAAAGAACCG
TGGCGTGCTATTATCAGAGTTCAAGATCATAAATCAGGATCCACCTGCTCTATCTGACAA
ATCAGTCATCAGCGCAATGGAATTTGCTGCAAAACAGTTGAACCTCGAATATAAGCTGAT
GATTAGCAGAGCTTATCATGATTCACTCTTCATGGCCAGAATATCACCAATGGGTATGAT
CTTCATTCCATGTTACAAAGGTTACAGCCACAAGCCCGAAGAATATGCGTCACCAGAGGA
CATGGCGAACGGTGTGAAGGTGCTTGCCTTGGCAATGGCCAGATTATCCCTGCAGTGAGC
TTAGACATGGAGGAAGGAAGGAATCAATGAGTTCAGATCACCCAACACCTTCGTGTTCCT
GCAATGGAAACACGATGTACAGCAATTCCTCGCGTGGCAAAACAAAGCCATGGTGATTCT
TCAGGAATAATAAATTAATAACATTTGGAAGCCATGGTGATTCTTCAGGAATAATAGATT
GATAACATTTGGATGGGCAGCAGAAAACTAGTCCGTATGTTTTCAGCGAGGGAATAAATA
AATAAATTTCTGATGGCATCATCATGAATCTGAATGTATCCTGTGTTCTTGCTTGAATTT
TTCTTTTTGAAGGAAATAATAATAGTCGATGGCAAAATTTAGC