Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0597400-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:25082544:25085996:-1 gene:Os12g0597400 gene_biotype:protein_coding transcript_biotype:protein_coding description:HI0933-like protein family protein. (Os12t0597400-01)
Sequence	ATGCCGCCGACGCCGCCGCCTCTCCTCCTCCCGGCGCCACGCTGCCCACGCTCTACCGCC GTGCTGGCGGCGTCCCGCTTCGCCGCGTCCGCATCCTCCTCTTCCGGAGGAGGAGGAGGA GGTAGCAGCAGCGGCGCGCGCACGGCGAGGCCGCCCCCGGCCCCGCGGCGGCGGCGCGGC AAGCCCGGGTTCTCGCGGCAGTCCGCCATCAAGAAGAGCTTCCACCAGGAGCAGGTGGTG TTCTCCACGCCTGTTCCCCCCGACCCATCCGTCGCCGTCGTAGGCGGCGGCGCATCCGGC CTCGCCTGCGCCGCCTCCCTCGCCGCCCGCGGCGTCCGCGCCGTCGTCTTCGACACGGGG ATGCACGGGCTAGGAGGGAGGATGGCGACGAGAGCTATCGCCGCCGCCGGCGACCAGCAG CAGCAGCAGCAGCTGGTGTTCGACCACGCGGCGCAGTTCTTCACCGCGAGCGACGAGAGG TTCAAGAGGGTGGTCGACGAGTGGATGGACAAGGGCTTGGTCCGCGAGTGGGGAGGCTTG ATCGGTGAGCTCGACGCCGGCGGCCATTTCAGGCCTATGCCTTCCTCCTCGCCGCCGCGG TACATCGGCGTCGACGGGATGCGGCCGCTTGCAGATGCGATTCTGCCTGAGAGTGACCTA ATTGAAGTTGTCCGGCCGTGTTGGATAAGCAAGCTTGAGCCGTTCAATGGCCTGTGGCGC TTGTTTGAGAATGAGAAGCCACATGGTCAATATGATGCAATTGTGATAGCACATAATGGG AAATGTGCCAATCGTCTGCTCTCTACATCAGGTCTACCACTGCTGACAAGACAAATGAAG AGATTACAGCTAAGTTCTGTCTGGGCGCTCCTCGCGGCATTTCAAGATCCTCTACCAATT CCACAAACTGATTCTTATGGAACATTTGAAGGAGCATTTGTGAAAGATGTTGATTCTCTC TCTTGGATGGCCAACAATACTCAGAAACTTTTCCCCTTGCAGACTGGCAGACCCGAGTGC TGGACATTTTTCAGCACTGCTGCTTATGGAAAAAGAAACAAAGTTCCGCAGGAAAACATT CCAAAGATCACGGCGGAAAAGGTGAAGGAAGACATGCTTAGAGGTGTAGAGCTTGCTTTA GGGCTATCAAGAGGATCTCTTCAGCAACCATTTTACACGAGAGTACAATTGTGGGGTGCA GCTCTACCAATGAACACTCCAGGAGTCCCATGCATATTTGATCCCCAAGGGAGAGCAGGC ATCTGTGGTGACTGGCTAACAGGTTCAAGCATAGAAGCGGCTGTGTTAAGCGGAATGTCT CTTGCAAACCATATCGCTGACTACTTTGCAAGCAGTGGTGAACAACCAGAGGAGTTTGCA ATTGGTTTGCATGAGAACTTGAGCCAGGTTGAAGGTCATGATATTGGTCAGTTCCCAGGT TTAGAGAGTCAGAAACCGCATGTAGCTGAAGCTCAGCTAACACCGAGCACATGA

Peptide Sequence

PEP ID	Os12t0597400-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:25082544:25085996:-1 gene:Os12g0597400 transcript:Os12t0597400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:HI0933-like protein family protein. (Os12t0597400-01)
Sequence	MPPTPPPLLLPAPRCPRSTAVLAASRFAASASSSSGGGGGGSSSGARTARPPPAPRRRRG KPGFSRQSAIKKSFHQEQVVFSTPVPPDPSVAVVGGGASGLACAASLAARGVRAVVFDTG MHGLGGRMATRAIAAAGDQQQQQQLVFDHAAQFFTASDERFKRVVDEWMDKGLVREWGGL IGELDAGGHFRPMPSSSPPRYIGVDGMRPLADAILPESDLIEVVRPCWISKLEPFNGLWR LFENEKPHGQYDAIVIAHNGKCANRLLSTSGLPLLTRQMKRLQLSSVWALLAAFQDPLPI PQTDSYGTFEGAFVKDVDSLSWMANNTQKLFPLQTGRPECWTFFSTAAYGKRNKVPQENI PKITAEKVKEDMLRGVELALGLSRGSLQQPFYTRVQLWGAALPMNTPGVPCIFDPQGRAG ICGDWLTGSSIEAAVLSGMSLANHIADYFASSGEQPEEFAIGLHENLSQVEGHDIGQFPG LESQKPHVAEAQLTPST

Transcript Sequence

Transcript ID	Os12t0597400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25082544:25085996:-1 gene:Os12g0597400 gene_biotype:protein_coding transcript_biotype:protein_coding description:HI0933-like protein family protein. (Os12t0597400-01)
Sequence	TCCCCCCGCATTTCGTCGAACACCTACCGCGATGCCGCCGACGCCGCCGCCTCTCCTCCT CCCGGCGCCACGCTGCCCACGCTCTACCGCCGTGCTGGCGGCGTCCCGCTTCGCCGCGTC CGCATCCTCCTCTTCCGGAGGAGGAGGAGGAGGTAGCAGCAGCGGCGCGCGCACGGCGAG GCCGCCCCCGGCCCCGCGGCGGCGGCGCGGCAAGCCCGGGTTCTCGCGGCAGTCCGCCAT CAAGAAGAGCTTCCACCAGGAGCAGGTGGTGTTCTCCACGCCTGTTCCCCCCGACCCATC CGTCGCCGTCGTAGGCGGCGGCGCATCCGGCCTCGCCTGCGCCGCCTCCCTCGCCGCCCG CGGCGTCCGCGCCGTCGTCTTCGACACGGGGATGCACGGGCTAGGAGGGAGGATGGCGAC GAGAGCTATCGCCGCCGCCGGCGACCAGCAGCAGCAGCAGCAGCTGGTGTTCGACCACGC GGCGCAGTTCTTCACCGCGAGCGACGAGAGGTTCAAGAGGGTGGTCGACGAGTGGATGGA CAAGGGCTTGGTCCGCGAGTGGGGAGGCTTGATCGGTGAGCTCGACGCCGGCGGCCATTT CAGGCCTATGCCTTCCTCCTCGCCGCCGCGGTACATCGGCGTCGACGGGATGCGGCCGCT TGCAGATGCGATTCTGCCTGAGAGTGACCTAATTGAAGTTGTCCGGCCGTGTTGGATAAG CAAGCTTGAGCCGTTCAATGGCCTGTGGCGCTTGTTTGAGAATGAGAAGCCACATGGTCA ATATGATGCAATTGTGATAGCACATAATGGGAAATGTGCCAATCGTCTGCTCTCTACATC AGGTCTACCACTGCTGACAAGACAAATGAAGAGATTACAGCTAAGTTCTGTCTGGGCGCT CCTCGCGGCATTTCAAGATCCTCTACCAATTCCACAAACTGATTCTTATGGAACATTTGA AGGAGCATTTGTGAAAGATGTTGATTCTCTCTCTTGGATGGCCAACAATACTCAGAAACT TTTCCCCTTGCAGACTGGCAGACCCGAGTGCTGGACATTTTTCAGCACTGCTGCTTATGG AAAAAGAAACAAAGTTCCGCAGGAAAACATTCCAAAGATCACGGCGGAAAAGGTGAAGGA AGACATGCTTAGAGGTGTAGAGCTTGCTTTAGGGCTATCAAGAGGATCTCTTCAGCAACC ATTTTACACGAGAGTACAATTGTGGGGTGCAGCTCTACCAATGAACACTCCAGGAGTCCC ATGCATATTTGATCCCCAAGGGAGAGCAGGCATCTGTGGTGACTGGCTAACAGGTTCAAG CATAGAAGCGGCTGTGTTAAGCGGAATGTCTCTTGCAAACCATATCGCTGACTACTTTGC AAGCAGTGGTGAACAACCAGAGGAGTTTGCAATTGGTTTGCATGAGAACTTGAGCCAGGT TGAAGGTCATGATATTGGTCAGTTCCCAGGTTTAGAGAGTCAGAAACCGCATGTAGCTGA AGCTCAGCTAACACCGAGCACATGATTTTTCTTTTGTTAGTTCTGTACTGGTAATTTCTG TAGCATGTAAATGATGAGCTGATTCTTTTGTTGCACAGAACGTGTATGTTGTAAACCGCA AAAATGTATATCAACCATGTATATGTAGAAATTTTTGAAGCTCTTCGAATGTTTCATCTA CCTGGTGTTTGGAAGTACATCTGGATGTTTGGAAGGCTATATATATATATAATATTCTTG