Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0596800-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:25051273:25056620:1 gene:Os12g0596800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, LIM-type domain containing protein. (Os12t0596800-01);Similar to Zinc ion binding protein. (Os12t0596800-02)
Sequence	ATGGGTTGGTTAAATAAAATATTTAAAGGTTCAGTAAATAGAGTTTCAAGGGGCCATTAT GATGGAAGCTGGCATGAAGGTCATTCATCAGATAACGCCAGAGGAGCGTATGATGAAAGT GATAATGAAGATATAGATCGTGCTATTGCACTGTCTTTATCAGAAGAACAAAATAAGGGA AAAGCTGTTGATATCGATTATAATTTGGAGGAAGATGAACAACTTGCACGAGCTCTCCAG GAGAGCCTTAATGCTGACTCTCCTCCACGTCAGAATATTCCTGTTGAGAATGTTCCATCA GAGCCCCCAAGAGAGCTGCCTCCGATTCTATTTGCCTCAAGTGGATCCAGAACTTGTGCT GGATGCAAAAACCCAATTGGTCATGGACGTTTTCTTAGCTGTATGGATTCAGTATGGCAT CCTCAGTGCTTCAGGTGTTTTGCTTGTAACAAGCCCATCTCTGAGTATGAGTTTGCTATG CATGAAGATCAGCCATACCACAAATCATGCTACAAAGATTTTTTCCATCCAAAATGTGAT GTCTGCAAGAACTTTATTCCAACGAACAGGAATGGGCTGATCGAATACCGAGCACATCCA TTCTGGATGCAAAAGTACTGTCCTTCCCATGAAGATGATGGCACTCCTAGGTGTTGCAGT TGTGAAAGAATGGAGCCGATGGACATCAAATACATCACATTAGATGATGGGAGGAAACTC TGCTTGGAATGTCTCAATTCTTCAATAATGGATACACCAGAGTGTCAACAGCTGTATATG GACATTCAGGAATTTTTTGAAGGTCTGAACATGAAAGTGGAGCAACAAGTTCCAATACTC TTGGTTGAGAGACAGGCTCTAAATGAGGCTTTAGAAACTGAGAAAAATGGGCATCATCTT CCTGAAACAAGGGGACTATGTCTTTCTGAAGAGCAAATTGTCAGAACGATCTTAAGAAGA CCAATAATTGGACCGGGAAACAGAATTATAGATATGATCACAGCACCATATAAGCTGGAA AGACGATGTGAAGTGACTGCAATCCTGATATTATATGGGTTGCCGAGATTACAAACTGGC TCAATTCTCGCCCATGAAATGATGCATGCTTATCTACGTCTGAAAGGATTTCGGTCTCTT AGTCCTCAGGTTGAAGAAGGCATATGCCAAGTTCTTTCCCACATGTGGCTCGAGTCAGAG ATCATCTTTGGTTCTAGTATCGACATATCAGCCACCTCAGTGGCATCTTCGTCGTCGTCA TCTTCAACTCCAACCACATCAAAGAAGGGCGCAAAGACCGAATTCGAGAAGAAGCTCGGA GCATTCATCAAACATCAGATCGAAACGGATTCATCTGAGGCATACGGAGATGGTTTTCGA GCTGCCAATCGGGCTGTCGAAAGCTATGGCCTGAGAAGTACCCTTAATCATATGAAAATG ACAGGGTCTTTCCCATATTGA

Peptide Sequence

PEP ID	Os12t0596800-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:25051273:25056620:1 gene:Os12g0596800 transcript:Os12t0596800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, LIM-type domain containing protein. (Os12t0596800-01);Similar to Zinc ion binding protein. (Os12t0596800-02)
Sequence	MGWLNKIFKGSVNRVSRGHYDGSWHEGHSSDNARGAYDESDNEDIDRAIALSLSEEQNKG KAVDIDYNLEEDEQLARALQESLNADSPPRQNIPVENVPSEPPRELPPILFASSGSRTCA GCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSCYKDFFHPKCD VCKNFIPTNRNGLIEYRAHPFWMQKYCPSHEDDGTPRCCSCERMEPMDIKYITLDDGRKL CLECLNSSIMDTPECQQLYMDIQEFFEGLNMKVEQQVPILLVERQALNEALETEKNGHHL PETRGLCLSEEQIVRTILRRPIIGPGNRIIDMITAPYKLERRCEVTAILILYGLPRLQTG SILAHEMMHAYLRLKGFRSLSPQVEEGICQVLSHMWLESEIIFGSSIDISATSVASSSSS SSTPTTSKKGAKTEFEKKLGAFIKHQIETDSSEAYGDGFRAANRAVESYGLRSTLNHMKM TGSFPY

Transcript Sequence

Transcript ID	Os12t0596800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25051273:25056620:1 gene:Os12g0596800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, LIM-type domain containing protein. (Os12t0596800-01);Similar to Zinc ion binding protein. (Os12t0596800-02)
Sequence	GCGTCTCCGTCTCATCCCTTCTCGCCTCTTATTATTCTTCTTCTTCTTTTCTTTATCCTG TGGAAGGCGTTCTTGGGTGGGGAGAGATCAAGAACCGGAGCTGTCCGTGGCCGGTGGTTC GCCTGTCCCGAGCTCGATTAGTTACCCTTTGTCTCGGTTCTTGGTGCGTGGTCAATCGGG ACTACAGAGAATTGGAGTTTCTTGTGGGAGTTTCAGGGTCACTTCGAGGTGAAAGCGGAC TGAGCGGGAGGCGAGGCGATCGACGGCGAACTGAATTCCTAGTTTGTTGCAGGCTCAAGC TTTGGTTTTCTGAAGTACTGGAAACGTTCTCGATTGGCGAAAAGTTTGTGAGATTTTTGT CTTCTGGCTACAGAAAATTCGACCCTCAGATAACCTCGAGTCATGGGTTGGTTAAATAAA ATATTTAAAGGTTCAGTAAATAGAGTTTCAAGGGGCCATTATGATGGAAGCTGGCATGAA GGTCATTCATCAGATAACGCCAGAGGAGCGTATGATGAAAGTGATAATGAAGATATAGAT CGTGCTATTGCACTGTCTTTATCAGAAGAACAAAATAAGGGAAAAGCTGTTGATATCGAT TATAATTTGGAGGAAGATGAACAACTTGCACGAGCTCTCCAGGAGAGCCTTAATGCTGAC TCTCCTCCACGTCAGAATATTCCTGTTGAGAATGTTCCATCAGAGCCCCCAAGAGAGCTG CCTCCGATTCTATTTGCCTCAAGTGGATCCAGAACTTGTGCTGGATGCAAAAACCCAATT GGTCATGGACGTTTTCTTAGCTGTATGGATTCAGTATGGCATCCTCAGTGCTTCAGGTGT TTTGCTTGTAACAAGCCCATCTCTGAGTATGAGTTTGCTATGCATGAAGATCAGCCATAC CACAAATCATGCTACAAAGATTTTTTCCATCCAAAATGTGATGTCTGCAAGAACTTTATT CCAACGAACAGGAATGGGCTGATCGAATACCGAGCACATCCATTCTGGATGCAAAAGTAC TGTCCTTCCCATGAAGATGATGGCACTCCTAGGTGTTGCAGTTGTGAAAGAATGGAGCCG ATGGACATCAAATACATCACATTAGATGATGGGAGGAAACTCTGCTTGGAATGTCTCAAT TCTTCAATAATGGATACACCAGAGTGTCAACAGCTGTATATGGACATTCAGGAATTTTTT GAAGGTCTGAACATGAAAGTGGAGCAACAAGTTCCAATACTCTTGGTTGAGAGACAGGCT CTAAATGAGGCTTTAGAAACTGAGAAAAATGGGCATCATCTTCCTGAAACAAGGGGACTA TGTCTTTCTGAAGAGCAAATTGTCAGAACGATCTTAAGAAGACCAATAATTGGACCGGGA AACAGAATTATAGATATGATCACAGCACCATATAAGCTGGAAAGACGATGTGAAGTGACT GCAATCCTGATATTATATGGGTTGCCGAGATTACAAACTGGCTCAATTCTCGCCCATGAA ATGATGCATGCTTATCTACGTCTGAAAGGATTTCGGTCTCTTAGTCCTCAGGTTGAAGAA GGCATATGCCAAGTTCTTTCCCACATGTGGCTCGAGTCAGAGATCATCTTTGGTTCTAGT ATCGACATATCAGCCACCTCAGTGGCATCTTCGTCGTCGTCATCTTCAACTCCAACCACA TCAAAGAAGGGCGCAAAGACCGAATTCGAGAAGAAGCTCGGAGCATTCATCAAACATCAG ATCGAAACGGATTCATCTGAGGCATACGGAGATGGTTTTCGAGCTGCCAATCGGGCTGTC GAAAGCTATGGCCTGAGAAGTACCCTTAATCATATGAAAATGACAGGGTCTTTCCCATAT TGATCATTCCTCAATTGTGAGGATTGATGCATATTTGGAGATTATTGGAGTTACATATAC CCTCATCATGGTAGCATTAATTTACAGTAAATTGAGAAAAGAAAGAAGAGGATTGAATAG GACATAAATTGCACCAATGCTTTCTTGTTGTCTTTGAAATAATACATGTAAGTCTTCCTA TAGAGAGGTTTTATAGTTTTTCACAGTGAACACATCCTTGGAAAAGAACAGGCAATCAGA AGATAATTTTGCTGAGTTATGTACTTATGTAACACCTTTTGTATCTGAATGTATTTATTT CATTCACTCCAATAATTTCATTTTTATTTTTGAAGG