Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0596000-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:25026616:25032325:-1 gene:Os12g0596000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Lipoyltransferase (EC 2.3.1.-) (Lipoyl-[acyl-carrier protein]-protein- N-lipoyltransferase) (Lipoate-protein ligase B). (Os12t0596000-02)
Sequence	ATGGCCTTGCCCTGCTCCTATGGCTCCCACTGCGCCGCCCTGCCCTTCCCCGCCGTGGTC TCCAGGGCGGCCTCCTCGCCGCCACCGCGCTCCCGGGGGAGAAGGCCCAGCCTACCACCC GCCGGATGCTTCCACGCCGCGCCAAGGGACGCCGCTCTGGTGTCCGGCTCCGCTGCTGGT GGCGTGAGCAGGAGGAGGTGTGAGTTATTTGACCTCCATCAGCACATCGTTCCATTTGCG GAATCTTGGGCTTGGCAGCAGTCCATTGTGACAAGGAGGAAAGGGTTGGTAGGCACGGAT GAAGATCACTCCGACACCTTAATCGCGCTGCAGCATCCACCAGTTTATACGCTAGGCACT GACAGCACCGAGGACTACCTCCATTTCGATGTTAAAGATGCTCCTTTTGAGGTTCACCGT ATTGACCGTGGTGGGGAGGTGACATATCATGGTCCTGGACAGCTTGTAATGTACCCGATT ATCAACTTGCGATATCATCAAATGGACCTTCATTGGTACTTTAGATCACTTGAAGAGGTG ATCATTCGTGCCCTTCAGTCCGCATTTTCCATCAAGGCATCTAGGGTAGAAGGTCTAACC GGTGTCTGGGTTGGAGATAAGAAAGTTGCAGCAATAGGAATTCATGTCTCACGATGGATA GCATATCATGGTCTAGCACTCAACGTAACCACTGACTTAACACCATTTCAACTCATTGTT CCCTGCGGCATAAAAGATCGTGGCGTTGGGAGCATCAAAGAGATATTGCAAATAGCATCT GATGGAAAAGAGATAGACGAAACAGCATTGATCGATAAAGCCTACAGAACCCTGCTTAAA GAGTTTGCTGAAGTTTTCCAGCTCTCTTTATATCACAACCCTAACTGGGATCTTCAGGAA AGCAAAAATTTTAGTTAA

Peptide Sequence

PEP ID	Os12t0596000-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:25026616:25032325:-1 gene:Os12g0596000 transcript:Os12t0596000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Lipoyltransferase (EC 2.3.1.-) (Lipoyl-[acyl-carrier protein]-protein- N-lipoyltransferase) (Lipoate-protein ligase B). (Os12t0596000-02)
Sequence	MALPCSYGSHCAALPFPAVVSRAASSPPPRSRGRRPSLPPAGCFHAAPRDAALVSGSAAG GVSRRRCELFDLHQHIVPFAESWAWQQSIVTRRKGLVGTDEDHSDTLIALQHPPVYTLGT DSTEDYLHFDVKDAPFEVHRIDRGGEVTYHGPGQLVMYPIINLRYHQMDLHWYFRSLEEV IIRALQSAFSIKASRVEGLTGVWVGDKKVAAIGIHVSRWIAYHGLALNVTTDLTPFQLIV PCGIKDRGVGSIKEILQIASDGKEIDETALIDKAYRTLLKEFAEVFQLSLYHNPNWDLQE SKNFS

Transcript Sequence

Transcript ID	Os12t0596000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:25026616:25032325:-1 gene:Os12g0596000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Lipoyltransferase (EC 2.3.1.-) (Lipoyl-[acyl-carrier protein]-protein- N-lipoyltransferase) (Lipoate-protein ligase B). (Os12t0596000-02)
Sequence	AGACGGCCGCCATGGCCTTCTCCTCCTCGCCTCCTCGGTGACTCCGCCCGCCGCCGCTGG CTGCCGGCGCAGCGCCACCCTACAAGTCACCGCCCCACCGCGAGAGGAGGGCGGGCATGG CCTTGCCCTGCTCCTATGGCTCCCACTGCGCCGCCCTGCCCTTCCCCGCCGTGGTCTCCA GGGCGGCCTCCTCGCCGCCACCGCGCTCCCGGGGGAGAAGGCCCAGCCTACCACCCGCCG GATGCTTCCACGCCGCGCCAAGGGACGCCGCTCTGGTGTCCGGCTCCGCTGCTGGTGGCG TGAGCAGGAGGAGGTGTGAGTTATTTGACCTCCATCAGCACATCGTTCCATTTGCGGAAT CTTGGGCTTGGCAGCAGTCCATTGTGACAAGGAGGAAAGGGTTGGTAGGCACGGATGAAG ATCACTCCGACACCTTAATCGCGCTGCAGCATCCACCAGTTTATACGCTAGGCACTGACA GCACCGAGGACTACCTCCATTTCGATGTTAAAGATGCTCCTTTTGAGGTTCACCGTATTG ACCGTGGTGGGGAGGTGACATATCATGGTCCTGGACAGCTTGTAATGTACCCGATTATCA ACTTGCGATATCATCAAATGGACCTTCATTGGTACTTTAGATCACTTGAAGAGGTGATCA TTCGTGCCCTTCAGTCCGCATTTTCCATCAAGGCATCTAGGGTAGAAGGTCTAACCGGTG TCTGGGTTGGAGATAAGAAAGTTGCAGCAATAGGAATTCATGTCTCACGATGGATAGCAT ATCATGGTCTAGCACTCAACGTAACCACTGACTTAACACCATTTCAACTCATTGTTCCCT GCGGCATAAAAGATCGTGGCGTTGGGAGCATCAAAGAGATATTGCAAATAGCATCTGATG GAAAAGAGATAGACGAAACAGCATTGATCGATAAAGCCTACAGAACCCTGCTTAAAGAGT TTGCTGAAGTTTTCCAGCTCTCTTTATATCACAACCCTAACTGGGATCTTCAGGAAAGCA AAAATTTTAGTTAACTGCAGAATATTTTATTGGATTCTTGAAATTCAACTTGCATTGAAG TCAGAAACCAGTACAGGTGGATAGAGAGGCAAACATAATTAGATCAAAGTGAAGTCTCCT TCACTCTAATATCACCAAAACTGCAGAACTAGTCATCCATGTGCGCAAGCTCAAACTTTT GCTTCACCTGCCAATCAGATAACGCTATCAGTTTTGAAGATGATGGTAATATGTAGGAGA GGTGAGAAGTTCAGCCAAGCCAATTAACCTTCTGTTAGGAGCCATGTGGGCTGCAATATG GGCTGGATCAGCTACTTTCCAAAGAAGTCCAAGCAAGCCCAAGAGGCAACCATATATAAG TAGCAGTAGCACTTCTAGGAGGGGACGAACAGATTGATTGGCCAAGGCGGCGAACGGCGG CGGCGGCGACCTGGAGGCTGGCTGGCCTCTTTGTCGATCTCTCCTCTATCTCCCTTCTTC TCTACTAGTCTAGAAGCTACTAGAACCTTCTAGCCCTTGTATCCTTCCATCTTCCACCTC AAAACCACTCCACTATTGTAACAGACTTGGTTGTTCCCTGTGTTGGATTTGGCACTGCTA TTTCTGAAATTACATTGTTGGTGGGTCTCTAACACCTTCTTTGGGGTTCGAAGTGGATCC ATCTGCCTTTGTGTCAACACCCGGCCATGGCTTGCAAGTACAATGTTTCCCCTTCTCGAT ACCGTCGTAAACGGATGCGACATGTTTACCACATCCATTCCAGGTGAACTTGCCACATTT GCTGCATTCCACCTTGAAGCACATCCTGTGCTCTTCTTCAGGTGCTCCTTTGGTGCGTGG TGGGCAGTGGCAAATGTTGGGATGTTCTTTTGGATAGGTTCCTCTGGTCTTCATGGATTT CAGCATTTTATAGCATCATATGCTGTTCTTCTTCTGAAGGAACAATGTACAAATACCCTA TATATGCTGTTCAATGTAGTCTTTGACTCTTTGGTGATGGATACAATGTATGGATAATGT GTAAAATCTTGCAGTTAGTG