Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0594600-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:24957948:24961215:1 gene:Os12g0594600 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB/POZ fold domain containing protein. (Os12t0594600-01)
Sequence

ATGGCGGCGGCGGCGGCGGGGGCGGCGGCGGCGCCGTCGAGGCTTATGCTGCGCTTCCGG
GACGGCGAGCTGCGCTTCGCGGCCACCGACGATGCGCTGCGAGTCCCCTTGGGGTACGCG
ATCGGGGCCCCCTTCATCCGCAACGAGCGCATCTTCCGCCTCCTCGACGAGTACGCGCGG
ACCCACGCGCGGGGCGGCGGCGCCGACGCCGTGGCCAACATCGCCGCCTGGGACCGCGAC
TTCATGGCGCGGGAGGTCACCGACACCGTCACGCTCTACGACCTCTTCGTGGGCGCGACG
GCGCTGGGAATCGACGGGCTGAGCGACCTGTGTGCACAGATGACCGCGGACGCGGTGAAG
GGGCGTCCCGTGGGGGAGGTCAAGGCGCTGCTCGGCATCACCGACGTCGGCATGACGCAG
GAGGAGGAGCTCAAGCTCCAGCAAGACAACGATGCCATCCTCTACCTCCGTTAA

Peptide Sequence

PEP ID

Os12t0594600-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:24957948:24961215:1 gene:Os12g0594600 transcript:Os12t0594600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB/POZ fold domain containing protein. (Os12t0594600-01)
Sequence

MAAAAAGAAAAPSRLMLRFRDGELRFAATDDALRVPLGYAIGAPFIRNERIFRLLDEYAR
THARGGGADAVANIAAWDRDFMAREVTDTVTLYDLFVGATALGIDGLSDLCAQMTADAVK
GRPVGEVKALLGITDVGMTQEEELKLQQDNDAILYLR

Transcript Sequence

Transcript ID

Os12t0594600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:24957948:24961215:1 gene:Os12g0594600 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB/POZ fold domain containing protein. (Os12t0594600-01)
Sequence

CTCAGTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCCACTCCACCACCACCCTCA
CACACGCTCACACCCGGAGGCGGATTGGGGGATGGCGGCGGCGGCGGCGGGGGCGGCGGC
GGCGCCGTCGAGGCTTATGCTGCGCTTCCGGGACGGCGAGCTGCGCTTCGCGGCCACCGA
CGATGCGCTGCGAGTCCCCTTGGGGTACGCGATCGGGGCCCCCTTCATCCGCAACGAGCG
CATCTTCCGCCTCCTCGACGAGTACGCGCGGACCCACGCGCGGGGCGGCGGCGCCGACGC
CGTGGCCAACATCGCCGCCTGGGACCGCGACTTCATGGCGCGGGAGGTCACCGACACCGT
CACGCTCTACGACCTCTTCGTGGGCGCGACGGCGCTGGGAATCGACGGGCTGAGCGACCT
GTGTGCACAGATGACCGCGGACGCGGTGAAGGGGCGTCCCGTGGGGGAGGTCAAGGCGCT
GCTCGGCATCACCGACGTCGGCATGACGCAGGAGGAGGAGCTCAAGCTCCAGCAAGACAA
CGATGCCATCCTCTACCTCCGTTAACTACCTGATCATCATCAACAACGCTACTTTTGTCG
CTGAAGCATTTTGATTCCATCTCGCCTACTGTGGTGTACTTTGAGGTGGTATTGGCTTCT
CTACGTCTAGATAGACAGCTTAGCTAGATAGATGCACACTTCATCAACCTGGCTTCCTGG
TATGCTGCTGAACTTGTAGTAGTAATTCTGAGAGAAGTTTGGAGGAATTCTGAGAGAAGT
TTTGTCTGGTGCGGTGGTGCCTGGGCCTTGCACCTTACTAGTAGCTATTACTCGCTGCTT
AATTCAGTCATATTTGGTACTCCTGTGTACGGTACTAATTGAGAAAAACTGGTTATATTA
TCAATATATCATACTACCATCG