Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0590900-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:24742000:24745782:1 gene:Os12g0590900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent transferase, major region domain containing protein. (Os12t0590900-01)
Sequence	ATGCATCTCTCCCTATGGAAGCCCCTCTCCCACTGCGCCGCCGTCCTCCTCGCCAAGAAC CACCGCCGCCGCGGCGGCGGCGGCGGAAGCAATGGCCACCGCGGTGACGACCCGGCGTCG TTCCTCCGCCAGCTGCGCGACGCGCTCGACGCCGCGTCGGAGGACGGCTCGCTGTGCCCG CCCCCGGACGCCGCGGGCGCGGGCGCGGACGCCGACGCGGACGCCGCCGTGTCGCGCTCC CGCTCGCTCGCGCGGCTCCGGGCGCAGCGCGACTTCCTCCGCGCCACCGCGCTCGCCGCG GCGGGCGGCCCGTTCCGCTCGCCCTCCGACATCCCGCTCCTCCCCGCCGCCATCGCCGGG TTCCTCGCCATGTACCCGGACTACGCCACCACGTCCGACGTCGACCGCCTCCGCGTCGAG CACTACTCCCACCTCGACGCCGCCGCCCCCGGCGGCGGCGCGGGCGGCAGGGTCTGCCTC GACTACTGTGGTTTCGGCCTCTTCGACTCCGGCTGGGACTCCTCCTCCTCGTCCTTCACA TTGTCCGAGCTCAATGCCAACCTCAGCAACCACGCGCTCTACGGCGGCGCCGAGGCCGGC ACGGTGGAGAACGACATCAAGGAGAGGATCCTCGAGTACCTGAACGTGCCGGCGAGCGAG TACGCGCTGGTGTTCACCGTGAGCCGGGGCTCGGCGTTCCGGCTCCTCGCCGAGTGCTAC CCGTTCGAGACCAACCGGAGGCTGCTCACCATGTTCGACCACGAGAGCCAGTCCGTGAGC TGGATGGCGCAGAGCGCGCGGGCGAAGGGTGCCAAGACGCGCACCGCGTGGTTCCGGTGG CCGACATTGAAGCTCTGCTCGACGGAGCTGAGGAAGGAGATCGTCGGTAAGAGGAGAGGG CGGCGACGGGATTCTGCGGTTGGTTTGTTTGTGTTCCCTGCACAATCTCGGGTGACCGGC GCCAAGTACTCCTACCAGTGGATGGCGCTGGCGCAGCAGAATGGCTGGCATGTGATGCTT GATGCAGGCGCACTGGGCCCCAAGGACATGGATTCTCTGGGGCTCTCGCTGTTCAGGCCG GATTTCATCATAACCTCGTTCTACCGGGTTTTCGGTGCAGACCCAACTGGGTTTGGTTGC CTTCTGATTAAGAAATCAGTTATTGGGAGCTTGCAGGGGAGGAATGGGTGTAATGCTTCT GGGATGGTGAGGATTGTTCCAGTGTTTCCGCAATATCTAAGTGATTCTGTTGATGGATTT GATGCAATGGATGGTCTCGAAGATGATTCTGGTGTCCACAAAGATGAGAAGCCAGCGTCT GATGCCCGTAATGGTTCGCAGCTGCCAGCATTTTCAGGTGTGTACACATCTGCTCAGGTC AGAGAGGCATTTGAGAGTGATCCTGGCCGTGACAGCAGCTCGGACAGGGATGGGGCGAGC ACCATTTTTGAAGAAACTGAGAGCATCTCAGTTGGTGAGGTCATGAGGAGCCCGGCTTTC AGCGAAGATTGCTCTTCAGAGAATTCTTTCTGGGTTGATGTTGGCCAAAGCCCATTGGGG TCGGAGAAGGGTGGTCATTTCAAGAAAGGGAAACTTGGATCCCCATTACCATCTTCTTGG TTCGCTGGCAGAAAGAGTAACAAGAGGATGTCACCGAACCTAACATCCAGGATATCAAGA AGCCCTCTTTATGATGGTCAGGTGATATCTTTTGATGCAGCTGTATTATCAGTTTCACAT GACGCGGACTGCCTCAAGGAAGACCCTGAAGAAGAAATCTATGAGAATGGTCGGCGGAAT CACTTCAGGCAAGTTAGTGAAATTCAAGAGGAGCCAGAGGTTGAAGAAGTTGTATGTCAA CATGCTATGAATGGCGGTGGGGATCACAAAGAAAGTGCGATAAGAAGGGAGACTGAAGGG GAATTTCGGCTTTTGGGAGGGAGGGATGGAAACAGCAGATTTGCTGGGGGTCGGCTCTTC GGTGTTGAAGAGATTGATGCAGGTTTAAGCATGGGCCGTAGGGTTTCATTCAGCACTGAA GCAAATATTATTGCGGATAGACTACACCGGGCCTCAGATGCTGCTGAAGCTTCTGGATAT GCATTCCGTGATGATGATGGTTGTGTAAGTGATGGGTATGATAATGCTCAGGACTGGGGC AGGAGAGAGCCGGAGATAATATGCAGGCACATTGATCATGTTGATATGATGGGGCTTAAC AGAACTACTCTTAGATTAAGATACCTGATCAATTGGCTAGTAACTTCACTGTTGCAGCTG AGGTTACCAGGCTCAAAAGGTGGTGATGGAGACCCCCTTGTCCACATTTATGGCCCAAAG ATTAAGTACGAAAGGGGAGCTGCTGTTGCTTTCAATGTGAAGCAAAGTGATGGCACTTTT GTTAATGCTGAAGTTGTCCAGAAGATTGCGGAGAAGAATGGCATATCTCTTGGCATTGGT TTTCTCAGTCATATAAAGGTGGACCTGAACCACAAACAGTTAAATGGAGCATTCGATATA CCTGAGGCTTCCTTCTATAAGAACGGCCGCAAAGACAGTAAAAAGGTGACCATAAGAGTT GAAGTTGTGACTGCTTCCCTTGGCTTCCTTACTAATTTTGAAGACGTGTACAATATGTGG GCATTTGTCGCCAAGTTTCTGGATCCTTCATTTCTAGAAAGTGAGCGCCTCACCATTGCT GCTGACCACTCAGAGGGACAAACTTGA

Peptide Sequence

PEP ID	Os12t0590900-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:24742000:24745782:1 gene:Os12g0590900 transcript:Os12t0590900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent transferase, major region domain containing protein. (Os12t0590900-01)
Sequence	MHLSLWKPLSHCAAVLLAKNHRRRGGGGGSNGHRGDDPASFLRQLRDALDAASEDGSLCP PPDAAGAGADADADAAVSRSRSLARLRAQRDFLRATALAAAGGPFRSPSDIPLLPAAIAG FLAMYPDYATTSDVDRLRVEHYSHLDAAAPGGGAGGRVCLDYCGFGLFDSGWDSSSSSFT LSELNANLSNHALYGGAEAGTVENDIKERILEYLNVPASEYALVFTVSRGSAFRLLAECY PFETNRRLLTMFDHESQSVSWMAQSARAKGAKTRTAWFRWPTLKLCSTELRKEIVGKRRG RRRDSAVGLFVFPAQSRVTGAKYSYQWMALAQQNGWHVMLDAGALGPKDMDSLGLSLFRP DFIITSFYRVFGADPTGFGCLLIKKSVIGSLQGRNGCNASGMVRIVPVFPQYLSDSVDGF DAMDGLEDDSGVHKDEKPASDARNGSQLPAFSGVYTSAQVREAFESDPGRDSSSDRDGAS TIFEETESISVGEVMRSPAFSEDCSSENSFWVDVGQSPLGSEKGGHFKKGKLGSPLPSSW FAGRKSNKRMSPNLTSRISRSPLYDGQVISFDAAVLSVSHDADCLKEDPEEEIYENGRRN HFRQVSEIQEEPEVEEVVCQHAMNGGGDHKESAIRRETEGEFRLLGGRDGNSRFAGGRLF GVEEIDAGLSMGRRVSFSTEANIIADRLHRASDAAEASGYAFRDDDGCVSDGYDNAQDWG RREPEIICRHIDHVDMMGLNRTTLRLRYLINWLVTSLLQLRLPGSKGGDGDPLVHIYGPK IKYERGAAVAFNVKQSDGTFVNAEVVQKIAEKNGISLGIGFLSHIKVDLNHKQLNGAFDI PEASFYKNGRKDSKKVTIRVEVVTASLGFLTNFEDVYNMWAFVAKFLDPSFLESERLTIA ADHSEGQT

Transcript Sequence

Transcript ID	Os12t0590900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:24742000:24745782:1 gene:Os12g0590900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent transferase, major region domain containing protein. (Os12t0590900-01)
Sequence	GCAGAGCCCTCCCTCATGATGCAAATGCATTTAGTGAGGGCATTCAAAACACTTGCAAGA GTTTGGTGAGAGGAGGGAGGCTCTGTGTGAGATTTGTTCTGCATCTGACCTTAAGCTTCT TCTTCTTCTTCTTCCCTAGATTTGGAGAGACTAGAGCCAGGCCAGTTCATCACTGGTTTG TTGGGGAGCATTGTTTCTTGCTTGCTGCAAAGCAGAAAAGACAGAGTCAAATCTTTAGTT TTTATTTACATATTTCTTTCTTTTTTGCTTCCTCCTCTTTGATGCTCTTTTCTTTAATTT GAGTTCTTGATCCTGCCAAAAGCAAAAGCCCCTCACTTTTAGCTGAGGAGAGAAGTCCAA AAGGAAAAGGTGAAGGCTTGTCCTCCTTGCATCTCAACTCAAACCCTCCATCCCCCTCCA AACTCCTTCAAACCAAAAATCTCCAATTTTTACCACAAAAATCCCCATCTTTTCCTCCAA ATCCATTTGATTTCACCCCCACCACCAAACAAACCCTCTCAGATTTCTTCTCCCCACTTC TCCATTGCCATTCTGCCAGTGTTCTTGATTCAAGAAATGCTCATTTTCTGATCCATAGTT CTCCAAAGATCCAATTTTCTGAAATCTCTCCACGAAAATCTCTCATTTTTTCTCCTCCTC GATGCCTCGTTGATCCAAAATCGCCACGAAGAAGAAGGAGAAGCTGCGATTTCTCAGGTC GCTCGATTCCCTATGCATCTCTCCCTATGGAAGCCCCTCTCCCACTGCGCCGCCGTCCTC CTCGCCAAGAACCACCGCCGCCGCGGCGGCGGCGGCGGAAGCAATGGCCACCGCGGTGAC GACCCGGCGTCGTTCCTCCGCCAGCTGCGCGACGCGCTCGACGCCGCGTCGGAGGACGGC TCGCTGTGCCCGCCCCCGGACGCCGCGGGCGCGGGCGCGGACGCCGACGCGGACGCCGCC GTGTCGCGCTCCCGCTCGCTCGCGCGGCTCCGGGCGCAGCGCGACTTCCTCCGCGCCACC GCGCTCGCCGCGGCGGGCGGCCCGTTCCGCTCGCCCTCCGACATCCCGCTCCTCCCCGCC GCCATCGCCGGGTTCCTCGCCATGTACCCGGACTACGCCACCACGTCCGACGTCGACCGC CTCCGCGTCGAGCACTACTCCCACCTCGACGCCGCCGCCCCCGGCGGCGGCGCGGGCGGC AGGGTCTGCCTCGACTACTGTGGTTTCGGCCTCTTCGACTCCGGCTGGGACTCCTCCTCC TCGTCCTTCACATTGTCCGAGCTCAATGCCAACCTCAGCAACCACGCGCTCTACGGCGGC GCCGAGGCCGGCACGGTGGAGAACGACATCAAGGAGAGGATCCTCGAGTACCTGAACGTG CCGGCGAGCGAGTACGCGCTGGTGTTCACCGTGAGCCGGGGCTCGGCGTTCCGGCTCCTC GCCGAGTGCTACCCGTTCGAGACCAACCGGAGGCTGCTCACCATGTTCGACCACGAGAGC CAGTCCGTGAGCTGGATGGCGCAGAGCGCGCGGGCGAAGGGTGCCAAGACGCGCACCGCG TGGTTCCGGTGGCCGACATTGAAGCTCTGCTCGACGGAGCTGAGGAAGGAGATCGTCGGT AAGAGGAGAGGGCGGCGACGGGATTCTGCGGTTGGTTTGTTTGTGTTCCCTGCACAATCT CGGGTGACCGGCGCCAAGTACTCCTACCAGTGGATGGCGCTGGCGCAGCAGAATGGCTGG CATGTGATGCTTGATGCAGGCGCACTGGGCCCCAAGGACATGGATTCTCTGGGGCTCTCG CTGTTCAGGCCGGATTTCATCATAACCTCGTTCTACCGGGTTTTCGGTGCAGACCCAACT GGGTTTGGTTGCCTTCTGATTAAGAAATCAGTTATTGGGAGCTTGCAGGGGAGGAATGGG TGTAATGCTTCTGGGATGGTGAGGATTGTTCCAGTGTTTCCGCAATATCTAAGTGATTCT GTTGATGGATTTGATGCAATGGATGGTCTCGAAGATGATTCTGGTGTCCACAAAGATGAG AAGCCAGCGTCTGATGCCCGTAATGGTTCGCAGCTGCCAGCATTTTCAGGTGTGTACACA TCTGCTCAGGTCAGAGAGGCATTTGAGAGTGATCCTGGCCGTGACAGCAGCTCGGACAGG GATGGGGCGAGCACCATTTTTGAAGAAACTGAGAGCATCTCAGTTGGTGAGGTCATGAGG AGCCCGGCTTTCAGCGAAGATTGCTCTTCAGAGAATTCTTTCTGGGTTGATGTTGGCCAA AGCCCATTGGGGTCGGAGAAGGGTGGTCATTTCAAGAAAGGGAAACTTGGATCCCCATTA CCATCTTCTTGGTTCGCTGGCAGAAAGAGTAACAAGAGGATGTCACCGAACCTAACATCC AGGATATCAAGAAGCCCTCTTTATGATGGTCAGGTGATATCTTTTGATGCAGCTGTATTA TCAGTTTCACATGACGCGGACTGCCTCAAGGAAGACCCTGAAGAAGAAATCTATGAGAAT GGTCGGCGGAATCACTTCAGGCAAGTTAGTGAAATTCAAGAGGAGCCAGAGGTTGAAGAA GTTGTATGTCAACATGCTATGAATGGCGGTGGGGATCACAAAGAAAGTGCGATAAGAAGG GAGACTGAAGGGGAATTTCGGCTTTTGGGAGGGAGGGATGGAAACAGCAGATTTGCTGGG GGTCGGCTCTTCGGTGTTGAAGAGATTGATGCAGGTTTAAGCATGGGCCGTAGGGTTTCA TTCAGCACTGAAGCAAATATTATTGCGGATAGACTACACCGGGCCTCAGATGCTGCTGAA GCTTCTGGATATGCATTCCGTGATGATGATGGTTGTGTAAGTGATGGGTATGATAATGCT CAGGACTGGGGCAGGAGAGAGCCGGAGATAATATGCAGGCACATTGATCATGTTGATATG ATGGGGCTTAACAGAACTACTCTTAGATTAAGATACCTGATCAATTGGCTAGTAACTTCA CTGTTGCAGCTGAGGTTACCAGGCTCAAAAGGTGGTGATGGAGACCCCCTTGTCCACATT TATGGCCCAAAGATTAAGTACGAAAGGGGAGCTGCTGTTGCTTTCAATGTGAAGCAAAGT GATGGCACTTTTGTTAATGCTGAAGTTGTCCAGAAGATTGCGGAGAAGAATGGCATATCT CTTGGCATTGGTTTTCTCAGTCATATAAAGGTGGACCTGAACCACAAACAGTTAAATGGA GCATTCGATATACCTGAGGCTTCCTTCTATAAGAACGGCCGCAAAGACAGTAAAAAGGTG ACCATAAGAGTTGAAGTTGTGACTGCTTCCCTTGGCTTCCTTACTAATTTTGAAGACGTG TACAATATGTGGGCATTTGTCGCCAAGTTTCTGGATCCTTCATTTCTAGAAAGTGAGCGC CTCACCATTGCTGCTGACCACTCAGAGGGACAAACTTGAGCTTTATCTGTAATTTGCATT CAGCAAAGGAGAGGAAGGTGATTTTTCTCCTTTATGCCTTCGAGGAGTATTTGGTAGTGG ATTTAGCAGATTTGTTTATTCTTTGCTTAGTTCCTCGACATGTGACCTTTTTTGTTTCAT GTAGAGTTTGCTCAAATATGTACCAGCAGCTCACCAGTAGAGCTTCTTTCCACTGAACAA TGTTTGTAAAGCAGCTCACTGCCTCACTCGAAATGAAATAGTTTGAGTGCTTTGTAATAC ACTTGGTTAGGCATGTGTTCATCATGCAGTTTTTATATCATCACTTAACACTGTCGCATT TGC