Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0589100-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:24637078:24639791:-1 gene:Os12g0589100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Adenine phosphoribosyltransferase 1 description:Similar to Adenine phosphoribosyltransferase. (Os12t0589100-01)
Sequence

ATGACCTCGCCGCCGCCGCCGCCGTCGTCGTTGCTCCGCCGCCTCCCGACCACGCGCTGC
TGCTGCTTTGCCTCCGCGTCGAGCGGCTGGAGCGCGAGTGCGAGCGTGCGGCTCGGATCC
CTCGGCGGGAAGCAGCGGCGGGGGCATCGCGGCGTGGCGGTGATGGCGGCGGCGGCGGCA
GGGGGAGGAGGCTTCGAGGCGCGCGTGGCGCGGATCGCGTCCACCATCCGCGTCATCCCC
GACTTCCCCAAGCCAGGGATTATGTTTCAAGATATCACAACAATGCTTCTCAAGCCAGAT
GCATTTCGTGACACGATCGAGCTCTTCGTTGAGCGATACAAGGACAAAGGGATCACTGTA
ATTGCTGGTGTTGAAGCTAGAGGATTCATTTTTGGTCCGCCCATTGCTTTAGCACTAGGT
GCAAAATTTGTTCCATTGAGGAAGCCAAAAAAGTTACCTGGTGAGGTGATCTCGGAAGAA
TATTCTTTGGAATATGGTACAGATAAAATAGAAATGCATGTAGGAGCTGTGGAGCCAAAT
GGCCGGGCCGTTGTTGTTGATGATCTAATCGCTACAGGTGGAACCTTATCTGCAGCCGTT
AAACTTATTGAGCGTGCTGGAGCAGAGGTTGTTGAGTGCGCATGTGTCATTGAACTACCA
GAACTGAAGGGTCGGGACAAGCTGGGGAACAAGCCAGTTTTTGTCCTTGTGAAGGCAGAC
TAA

Peptide Sequence

PEP ID

Os12t0589100-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:24637078:24639791:-1 gene:Os12g0589100 transcript:Os12t0589100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Adenine phosphoribosyltransferase 1 description:Similar to Adenine phosphoribosyltransferase. (Os12t0589100-01)
Sequence

MTSPPPPPSSLLRRLPTTRCCCFASASSGWSASASVRLGSLGGKQRRGHRGVAVMAAAAA
GGGGFEARVARIASTIRVIPDFPKPGIMFQDITTMLLKPDAFRDTIELFVERYKDKGITV
IAGVEARGFIFGPPIALALGAKFVPLRKPKKLPGEVISEEYSLEYGTDKIEMHVGAVEPN
GRAVVVDDLIATGGTLSAAVKLIERAGAEVVECACVIELPELKGRDKLGNKPVFVLVKAD

Transcript Sequence

Transcript ID

Os12t0589100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:24637078:24639791:-1 gene:Os12g0589100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Adenine phosphoribosyltransferase 1 description:Similar to Adenine phosphoribosyltransferase. (Os12t0589100-01)
Sequence

AGCAGATGACCTCGCCGCCGCCGCCGCCGTCGTCGTTGCTCCGCCGCCTCCCGACCACGC
GCTGCTGCTGCTTTGCCTCCGCGTCGAGCGGCTGGAGCGCGAGTGCGAGCGTGCGGCTCG
GATCCCTCGGCGGGAAGCAGCGGCGGGGGCATCGCGGCGTGGCGGTGATGGCGGCGGCGG
CGGCAGGGGGAGGAGGCTTCGAGGCGCGCGTGGCGCGGATCGCGTCCACCATCCGCGTCA
TCCCCGACTTCCCCAAGCCAGGGATTATGTTTCAAGATATCACAACAATGCTTCTCAAGC
CAGATGCATTTCGTGACACGATCGAGCTCTTCGTTGAGCGATACAAGGACAAAGGGATCA
CTGTAATTGCTGGTGTTGAAGCTAGAGGATTCATTTTTGGTCCGCCCATTGCTTTAGCAC
TAGGTGCAAAATTTGTTCCATTGAGGAAGCCAAAAAAGTTACCTGGTGAGGTGATCTCGG
AAGAATATTCTTTGGAATATGGTACAGATAAAATAGAAATGCATGTAGGAGCTGTGGAGC
CAAATGGCCGGGCCGTTGTTGTTGATGATCTAATCGCTACAGGTGGAACCTTATCTGCAG
CCGTTAAACTTATTGAGCGTGCTGGAGCAGAGGTTGTTGAGTGCGCATGTGTCATTGAAC
TACCAGAACTGAAGGGTCGGGACAAGCTGGGGAACAAGCCAGTTTTTGTCCTTGTGAAGG
CAGACTAAGCGGAATGAAACAACTAAGGGCCTCTCAAGTTGTCCCTATTAATATCAGTGT
CCTTCTCGAAGCATGTTGGAAGCAACTAAGATATCGGTCGTGACAATATTAGCTTGTTCT
ATCCAGTGCTCTGCAATAAAAGTCTCATCTTTAAATTTGTAGGCACATGAGTTATTTGGG
AATTCGGACTTGAATGATCCTTGTAATACATCAAAACACGGCATAATTTTTTTTAAAGGA
GTGCCAATTATTCATGGGGAATGAGAATCACCT