Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0588800-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:24619889:24622059:-1 gene:Os12g0588800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIN-D5-1 description:Cyclin D domain containing protein. (Os12t0588800-01)
Sequence

ATGTCGATGGAGGAGGCGGAGGAGTGCTCGGCGGCGTGCGGCTTCTCGCTGACGTGCCAA
GAAGACGGCGCCGACCTCGGCGACGGCGTGGTCGACGACGACGACGACGGCGACGTATTC
TTGTTCTACAATGCCGTTGCGGCGGCGGACGACGAGGAGGAGGAGGAGGAGTACGTGGAG
CAGATGGTCTCCAAGGAGGCTAGCTTCTGCTGCTCCTCTTCTTCCTCCCTCTTCGACGCC
GCCGCCGGCGACGGCTACGGCGACGGCGACGGCGACGGGGACTGGTTCCGGCAAGCCCGC
CTCGCCGCTGTCAAGTGGATCCTCGAAACGAGGGGGTACTTCGGGTTCGGCCACCGGACG
GCGTACCTCGCCATCGCCTACTTCGACCGCTTCTGCCTCCGGCGACGCGTCGATAGGGAG
GCGATGCCGTGGGCGGCGCGGCTGCTGTCTATCGCGTGCGTGTCCGTGGCGGCGAAGATG
GAGGAGTACCAGTCGCCGGCGCTGTCGGAGTTCGACGCCGGCGGCGGCCGCGTGTTCTGC
TCGGACTCCATCCGCCGGATGGAGCTGCTCGTGCTGTCCACGCTGGGGTGGCGCATGGGC
GCCGTCACGCCATTCGACTTCCTCCCCTGCTTCTCCTCCCGCCTCCACCGCCACCACCAC
GGCGGCGCCGGCGCCGCCGGCCATGGCGCCGCCGCCGCCGCCCGCGTTGCCCTCAACGCC
GTCGGCTTCATCTTTGCCACAGCTGAAGCTGGAAGTGTGCTAGATTACAGGCCATCAACT
GTTGCTGCAGCTGCAATCTTGGCTGCATCCTATGGAGCTCCACTGACAAAAGAAGCATTG
GAGTCCAAGATGAGCAACCTTTCTCCATCTTGTCTTATTGACAAGGAGAATGTACATGCC
TGCTACAGTATGATGGTTGGGGACATGAACAACAACAGGAGGAGCAGCAAGCGACCATTG
CAATGTTCAGACTCCAATGAGATTACCACCACCAGTACATATGATTCTGTTCTTGTTGAT
GATGTTACCGACACCGCCGCCTTCGCTGCGACGGCGATGAATAAGCGGCTCAGGCCAGAG
CCGCCGCGAATCCGTTGA

Peptide Sequence

PEP ID

Os12t0588800-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:24619889:24622059:-1 gene:Os12g0588800 transcript:Os12t0588800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIN-D5-1 description:Cyclin D domain containing protein. (Os12t0588800-01)
Sequence

MSMEEAEECSAACGFSLTCQEDGADLGDGVVDDDDDGDVFLFYNAVAAADDEEEEEEYVE
QMVSKEASFCCSSSSSLFDAAAGDGYGDGDGDGDWFRQARLAAVKWILETRGYFGFGHRT
AYLAIAYFDRFCLRRRVDREAMPWAARLLSIACVSVAAKMEEYQSPALSEFDAGGGRVFC
SDSIRRMELLVLSTLGWRMGAVTPFDFLPCFSSRLHRHHHGGAGAAGHGAAAAARVALNA
VGFIFATAEAGSVLDYRPSTVAAAAILAASYGAPLTKEALESKMSNLSPSCLIDKENVHA
CYSMMVGDMNNNRRSSKRPLQCSDSNEITTTSTYDSVLVDDVTDTAAFAATAMNKRLRPE
PPRIR

Transcript Sequence

Transcript ID

Os12t0588800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:24619889:24622059:-1 gene:Os12g0588800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIN-D5-1 description:Cyclin D domain containing protein. (Os12t0588800-01)
Sequence

GTTCTCACTCTCGCTGCCCACTCTCCTCCTTCTCCGGCCGCCGCCGCCATCGCCGCCGGC
CGTAGCATGGTTCTTGCTTGACTGACCTGAATAAACAGTAGGGGTGATGTCGATGGAGGA
GGCGGAGGAGTGCTCGGCGGCGTGCGGCTTCTCGCTGACGTGCCAAGAAGACGGCGCCGA
CCTCGGCGACGGCGTGGTCGACGACGACGACGACGGCGACGTATTCTTGTTCTACAATGC
CGTTGCGGCGGCGGACGACGAGGAGGAGGAGGAGGAGTACGTGGAGCAGATGGTCTCCAA
GGAGGCTAGCTTCTGCTGCTCCTCTTCTTCCTCCCTCTTCGACGCCGCCGCCGGCGACGG
CTACGGCGACGGCGACGGCGACGGGGACTGGTTCCGGCAAGCCCGCCTCGCCGCTGTCAA
GTGGATCCTCGAAACGAGGGGGTACTTCGGGTTCGGCCACCGGACGGCGTACCTCGCCAT
CGCCTACTTCGACCGCTTCTGCCTCCGGCGACGCGTCGATAGGGAGGCGATGCCGTGGGC
GGCGCGGCTGCTGTCTATCGCGTGCGTGTCCGTGGCGGCGAAGATGGAGGAGTACCAGTC
GCCGGCGCTGTCGGAGTTCGACGCCGGCGGCGGCCGCGTGTTCTGCTCGGACTCCATCCG
CCGGATGGAGCTGCTCGTGCTGTCCACGCTGGGGTGGCGCATGGGCGCCGTCACGCCATT
CGACTTCCTCCCCTGCTTCTCCTCCCGCCTCCACCGCCACCACCACGGCGGCGCCGGCGC
CGCCGGCCATGGCGCCGCCGCCGCCGCCCGCGTTGCCCTCAACGCCGTCGGCTTCATCTT
TGCCACAGCTGAAGCTGGAAGTGTGCTAGATTACAGGCCATCAACTGTTGCTGCAGCTGC
AATCTTGGCTGCATCCTATGGAGCTCCACTGACAAAAGAAGCATTGGAGTCCAAGATGAG
CAACCTTTCTCCATCTTGTCTTATTGACAAGGAGAATGTACATGCCTGCTACAGTATGAT
GGTTGGGGACATGAACAACAACAGGAGGAGCAGCAAGCGACCATTGCAATGTTCAGACTC
CAATGAGATTACCACCACCAGTACATATGATTCTGTTCTTGTTGATGATGTTACCGACAC
CGCCGCCTTCGCTGCGACGGCGATGAATAAGCGGCTCAGGCCAGAGCCGCCGCGAATCCG
TTGAGGAAGCTAGCACCACCAGGGACACACAATTTTTAGTCAGATGTCTAGGGGGCGCTT
GGTTTGGATCTTCTCCTTTTCCCCTTCTTTTTTTCTCCCTTTTTTTGACATAAGTTTCCA
AAATATTTATTAGGTTCTTTGAGCCATTGCCATTGGTTGGCATTTGGCAAATGTTGTTGG
ATTGGATTGGTTTGGTTTGTGAGAAGGAGAAGAGATAATGAACAAAGGAAAAAAGGGGCT
GAGTGAGCTCTCCTAAGGAGAGGAGAGCTTGAGTTACTTGAAGCCCCAAATTCCAGTGCC
CAAATGGAGCACATTTCCTCTG