Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0583900-03
CDS Infomation	cds chromosome:IRGSP-1.0:12:24249683:24252130:1 gene:Os12g0583900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PDE135 (PIGMENT DEFECTIVE EMBRYO 135); transmembrane transporter. (Os12t0583900-01);Similar to Permease. (Os12t0583900-02);Similar to PDE135 (PIGMENT DEFECTIVE EMBRYO 135); transmembrane transporter. (Os12t0583900-03)
Sequence	TACCCCTTCCAATGGGGTACACCAATCTTCACTGCAGGTCATTCATTTGGAATGATGGGT GCTGTACTTGTTTCTGCTTTTGAGTCCACTGGTGCACACTTTGCAACTGCACGTCTAGCT GGTGCGACACCACCTCCAGCTAGTGTCCTTAGTAGGAGTGTTGGTTTGCAGGGCATTGGA ATGTTCCTAGAAGGTATCTTTGGCGCTCCAGCTGGTTCATCTGTATCAGTTGAAAACATT GGGCTTCTTGGACTAACAAAAGTTGGAAGCAGGAGAGTGATCCAGATATCAACTGGATTT ATGATTTTCTTCTCCATATTTGGGAAGTTTGGTGCTTTCTTTGCATCTATTCCATTGCCA ATCTTCGCAGCAATTTTCTGTATCTTATTTGGTATTGTTGCTGCGGTGGGAGTCTCGTAC ATGCAATTTGTAAACAAAAATTCGATGAGGAACATATACATCATTGGACTTTCGCTGTTC CTAGGCATCTCGGTTCCTCAATACTTCCATGAGTATACTGCTTCTGCTAGCACTGGACCT GCCCGAACAAATGCTGGATGGTTCAATGACATCATAAACACAGTCTTCGCCTCTGGCCCG ACAGTGTCACTGATTGTCGCATCGATCCTGGACAACACACTGGAGTTTAGAGGCTACGAA AACGACCGGGGGCTTCCATGGTTCATGCCGTTCCTGCACCGTCGGAAAGGTTACTCAGAT CCTAGAAACGACGAGTTCTACAGCTTCCCGATCAGGGTGCATGACGTCATCCCAAGCCGA TTCCTCTGA

Peptide Sequence

PEP ID	Os12t0583900-03
PEP Infomation	pep chromosome:IRGSP-1.0:12:24249683:24252130:1 gene:Os12g0583900 transcript:Os12t0583900-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PDE135 (PIGMENT DEFECTIVE EMBRYO 135); transmembrane transporter. (Os12t0583900-01);Similar to Permease. (Os12t0583900-02);Similar to PDE135 (PIGMENT DEFECTIVE EMBRYO 135); transmembrane transporter. (Os12t0583900-03)
Sequence	YPFQWGTPIFTAGHSFGMMGAVLVSAFESTGAHFATARLAGATPPPASVLSRSVGLQGIG MFLEGIFGAPAGSSVSVENIGLLGLTKVGSRRVIQISTGFMIFFSIFGKFGAFFASIPLP IFAAIFCILFGIVAAVGVSYMQFVNKNSMRNIYIIGLSLFLGISVPQYFHEYTASASTGP ARTNAGWFNDIINTVFASGPTVSLIVASILDNTLEFRGYENDRGLPWFMPFLHRRKGYSD PRNDEFYSFPIRVHDVIPSRFL

Transcript Sequence

Transcript ID	Os12t0583900-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:24249683:24252130:1 gene:Os12g0583900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PDE135 (PIGMENT DEFECTIVE EMBRYO 135); transmembrane transporter. (Os12t0583900-01);Similar to Permease. (Os12t0583900-02);Similar to PDE135 (PIGMENT DEFECTIVE EMBRYO 135); transmembrane transporter. (Os12t0583900-03)
Sequence	TACCCCTTCCAATGGGGTACACCAATCTTCACTGCAGGTCATTCATTTGGAATGATGGGT GCTGTACTTGTTTCTGCTTTTGAGTCCACTGGTGCACACTTTGCAACTGCACGTCTAGCT GGTGCGACACCACCTCCAGCTAGTGTCCTTAGTAGGAGTGTTGGTTTGCAGGGCATTGGA ATGTTCCTAGAAGGTATCTTTGGCGCTCCAGCTGGTTCATCTGTATCAGTTGAAAACATT GGGCTTCTTGGACTAACAAAAGTTGGAAGCAGGAGAGTGATCCAGATATCAACTGGATTT ATGATTTTCTTCTCCATATTTGGGAAGTTTGGTGCTTTCTTTGCATCTATTCCATTGCCA ATCTTCGCAGCAATTTTCTGTATCTTATTTGGTATTGTTGCTGCGGTGGGAGTCTCGTAC ATGCAATTTGTAAACAAAAATTCGATGAGGAACATATACATCATTGGACTTTCGCTGTTC CTAGGCATCTCGGTTCCTCAATACTTCCATGAGTATACTGCTTCTGCTAGCACTGGACCT GCCCGAACAAATGCTGGATGGTTCAATGACATCATAAACACAGTCTTCGCCTCTGGCCCG ACAGTGTCACTGATTGTCGCATCGATCCTGGACAACACACTGGAGTTTAGAGGCTACGAA AACGACCGGGGGCTTCCATGGTTCATGCCGTTCCTGCACCGTCGGAAAGGTTACTCAGAT CCTAGAAACGACGAGTTCTACAGCTTCCCGATCAGGGTGCATGACGTCATCCCAAGCCGA TTCCTCTGACGGGCGAGGGTAGCGCCCGTTACCTGCGCTTCCGCGCATGTAAATCTCTTT GTTCTTGTTAGCCCTTCCTTACTCCTGTGACATGTAGCAATTGGCACCGCCAAGATTAAA AAGTCTCAACTTAGTGGGGATATGGTACAAATGGTTAGGACTTTTGGTTTTCTTTTCTTT TTCCTCCCCTTTGGGCCAACCATTTGGTTAATTACATGATGGTGTAGAGTTGGTT