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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0583700-00
CDS Infomation

cds chromosome:IRGSP-1.0:12:24237212:24238416:-1 gene:Os12g0583700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER PROTEIN 252 description:Zinc finger, C2H2-type domain containing protein. (Os12t0583700-00)
Sequence

ATGGCGGTGGAGGCGGTTCTTGAGGCGTCGAGAAGTAGTAGTGAGGAGGAGGCGGAGGTG
ATCGTCACGCACGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGACAGGTGGAGGGGTGG
GGGAAGCGGAAGCGGTCGCGGCGGCGGCGACCGCAGCTGCCGCCCTCCGAGGAGGAGTAC
CTCGCGCTCTGCCTCCTCATGCTGGCGCGCGGGCGACGCGACGGCGACGACGTGGCGGCG
TCGGCGTCGGCGGCGGCGGCGGCGGTGGAGCACCGGTGCTCCGTCTGCGGCAAGGCGTTC
GCGTCCTACCAGGCTCTCGGCGGCCACAAGGCCAGCCACCGGAAGCCGCCGCCGCCCGCC
ATGGTCGACGACGACGAGGTGGTGGTGGAGACGAAACCGGCGGCTATCGCGACGCCGTCC
TCGTCGGCGTCGGGCGTCTCCGGCGGCGGCGGCGGGAGGGCGCACGAGTGCAACGTGTGC
GGCAAGGCGTTCCCGACGGGGCAGGCGCTGGGCGGCCACAAGCGATGCCACTACGACGGC
ACGATCGGCAGCGCCGCCGGCGCCGGCGCGTCCAAGCCGGCGGCGAAGACGACCGTGGCG
GTGGCGGCGAGCCGGGGCTTCGACCTCAACCTGCCGGCGCTGCCGGACGTCGCCGCCGCC
GCCGACCAGCGGTGCGCGGCGGAGGACGACGAGGTGCTCAGCCCTCTCGCCTTCAAGAAG
CCCAGGCTCATGATCCCGGCATAG

Peptide Sequence

PEP ID

Os12t0583700-00
PEP Infomation

pep chromosome:IRGSP-1.0:12:24237212:24238416:-1 gene:Os12g0583700 transcript:Os12t0583700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER PROTEIN 252 description:Zinc finger, C2H2-type domain containing protein. (Os12t0583700-00)
Sequence

MAVEAVLEASRSSSEEEAEVIVTHGGGGGGGGGGGQVEGWGKRKRSRRRRPQLPPSEEEY
LALCLLMLARGRRDGDDVAASASAAAAAVEHRCSVCGKAFASYQALGGHKASHRKPPPPA
MVDDDEVVVETKPAAIATPSSSASGVSGGGGGRAHECNVCGKAFPTGQALGGHKRCHYDG
TIGSAAGAGASKPAAKTTVAVAASRGFDLNLPALPDVAAAADQRCAAEDDEVLSPLAFKK
PRLMIPA

Transcript Sequence

Transcript ID

Os12t0583700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:24237212:24238416:-1 gene:Os12g0583700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER PROTEIN 252 description:Zinc finger, C2H2-type domain containing protein. (Os12t0583700-00)
Sequence

AATTCTACTCACCACTCCTCTTCTCCATTTCTCTCTTCTCCTTCCATTTTTCTTGTGCAC
TTCTCTTTCCCTTGCAAGCTCAAGAAACCCAATTAATTAAGATAGTTGTGATCATCTCCA
AGCTTAGCTAATTAAGCTACTAGTGGCCATGGCGGTGGAGGCGGTTCTTGAGGCGTCGAG
AAGTAGTAGTGAGGAGGAGGCGGAGGTGATCGTCACGCACGGCGGCGGCGGCGGCGGCGG
AGGAGGAGGAGGACAGGTGGAGGGGTGGGGGAAGCGGAAGCGGTCGCGGCGGCGGCGACC
GCAGCTGCCGCCCTCCGAGGAGGAGTACCTCGCGCTCTGCCTCCTCATGCTGGCGCGCGG
GCGACGCGACGGCGACGACGTGGCGGCGTCGGCGTCGGCGGCGGCGGCGGCGGTGGAGCA
CCGGTGCTCCGTCTGCGGCAAGGCGTTCGCGTCCTACCAGGCTCTCGGCGGCCACAAGGC
CAGCCACCGGAAGCCGCCGCCGCCCGCCATGGTCGACGACGACGAGGTGGTGGTGGAGAC
GAAACCGGCGGCTATCGCGACGCCGTCCTCGTCGGCGTCGGGCGTCTCCGGCGGCGGCGG
CGGGAGGGCGCACGAGTGCAACGTGTGCGGCAAGGCGTTCCCGACGGGGCAGGCGCTGGG
CGGCCACAAGCGATGCCACTACGACGGCACGATCGGCAGCGCCGCCGGCGCCGGCGCGTC
CAAGCCGGCGGCGAAGACGACCGTGGCGGTGGCGGCGAGCCGGGGCTTCGACCTCAACCT
GCCGGCGCTGCCGGACGTCGCCGCCGCCGCCGACCAGCGGTGCGCGGCGGAGGACGACGA
GGTGCTCAGCCCTCTCGCCTTCAAGAAGCCCAGGCTCATGATCCCGGCATAGCTAGCCAA
GCCCACAAGATTTGTTTAATTTTAGCCATAAAATTCCATTAAATTAAACCCATAGTTTTT
TCTGTTAATTACTTTCTTAATTTGGTGATTAGTCTTAGGAATGATGATTAGTTTGTGTAT
ATAGCCATTGTTTGTTCATCTATCATTTGTATCTTGTAATTAATCCCCTGTTAGCTAGAT
TTGGTTTAATTGGATATAGGAGTTACAGATCAATTCTTTCATTGGTTGAATTGGTTTAAT
TTATGTATATATATACAATATGTAAAATACATGTATAAGAAAAATACGCATATGTATTTA
ATTTT