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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0583000-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:24204768:24206629:-1 gene:Os12g0583000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Glycosyl transferase, group 1 family protein, expressed. (Os12t0583000-01)
Sequence

TACTATAGCATATTCAGTTGGTTATATGGTCTGGTCGGTTCATGCGCACATCTTGTGATG
GTAAATTCATCGTGGACAAGATCCCATATTGAAAATATTTGGAGGATACCAGAGCGTACT
AGGAGGGTATACCCTCCATGTGATACTTCTGCCCTGCAGATGCTTCCACTGGAAAGATCA
ACTACACCTCCTATTCTTATATCAGTTGCACAGTTTCGGCCAGAAAAGGCCCATGGACTT
CAGCTTGAGGCATTTGCAATTGCTCTTAAAAAGCTAAGTCCAGAATTTCCTAAGCCAAAG
CTTCAATTTGTTGGAAGCTGTCGGAATAAAGAGGATCTGGAAAGATTGCAAAAGCTTAAA
GACAGATCCACTGAACTACACATAGATGAGCTTGTGGAGTTCCACAAGGATATCTCTTAC
AGGGACTTGGTACAGCTTCTAGGTGGTGCTGTTGCTGGGCTCCATTCAATGACAGATGAG
CATTTTGGGATAAGTGTTGTTGAATACATGGCTGCTGGTGCTATTCCAATTGCCCATAAA
TCGGCAGGACCAATGATGGACATTGTGCTAGATGAGGATGGCCAACAGACAGGATTTCTA
GCCTCCGAGAAGGAAGAATATGCCGAGGCAATTGTCAAGGTCTTGCGGATGCCGGAGGCA
GAGAGGCATGAGATGGCAACAGCAGCACGAAAACGCGCTCAAAGATTTTCTGAGCATAGG
TTCCATGAAGATTTCACCGATGCAGTTCGCCCAATTTTGTCAGCAACATGA

Peptide Sequence

PEP ID

Os12t0583000-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:24204768:24206629:-1 gene:Os12g0583000 transcript:Os12t0583000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Glycosyl transferase, group 1 family protein, expressed. (Os12t0583000-01)
Sequence

YYSIFSWLYGLVGSCAHLVMVNSSWTRSHIENIWRIPERTRRVYPPCDTSALQMLPLERS
TTPPILISVAQFRPEKAHGLQLEAFAIALKKLSPEFPKPKLQFVGSCRNKEDLERLQKLK
DRSTELHIDELVEFHKDISYRDLVQLLGGAVAGLHSMTDEHFGISVVEYMAAGAIPIAHK
SAGPMMDIVLDEDGQQTGFLASEKEEYAEAIVKVLRMPEAERHEMATAARKRAQRFSEHR
FHEDFTDAVRPILSAT

Transcript Sequence

Transcript ID

Os12t0583000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:24204768:24206629:-1 gene:Os12g0583000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Glycosyl transferase, group 1 family protein, expressed. (Os12t0583000-01)
Sequence

CTACTATAGCATATTCAGTTGGTTATATGGTCTGGTCGGTTCATGCGCACATCTTGTGAT
GGTAAATTCATCGTGGACAAGATCCCATATTGAAAATATTTGGAGGATACCAGAGCGTAC
TAGGAGGGTATACCCTCCATGTGATACTTCTGCCCTGCAGATGCTTCCACTGGAAAGATC
AACTACACCTCCTATTCTTATATCAGTTGCACAGTTTCGGCCAGAAAAGGCCCATGGACT
TCAGCTTGAGGCATTTGCAATTGCTCTTAAAAAGCTAAGTCCAGAATTTCCTAAGCCAAA
GCTTCAATTTGTTGGAAGCTGTCGGAATAAAGAGGATCTGGAAAGATTGCAAAAGCTTAA
AGACAGATCCACTGAACTACACATAGATGAGCTTGTGGAGTTCCACAAGGATATCTCTTA
CAGGGACTTGGTACAGCTTCTAGGTGGTGCTGTTGCTGGGCTCCATTCAATGACAGATGA
GCATTTTGGGATAAGTGTTGTTGAATACATGGCTGCTGGTGCTATTCCAATTGCCCATAA
ATCGGCAGGACCAATGATGGACATTGTGCTAGATGAGGATGGCCAACAGACAGGATTTCT
AGCCTCCGAGAAGGAAGAATATGCCGAGGCAATTGTCAAGGTCTTGCGGATGCCGGAGGC
AGAGAGGCATGAGATGGCAACAGCAGCACGAAAACGCGCTCAAAGATTTTCTGAGCATAG
GTTCCATGAAGATTTCACCGATGCAGTTCGCCCAATTTTGTCAGCAACATGAGCTTGACA
AGCTAAGGAGTCTCCTCTTAACTGTCTGAAACACTAACAAGTTTCACATGATATGGTGAC
TATGAAGCTAACTGGCCAATTACTGGGTCTTGCATGCGGCATCCGTTTAAAGTGCGAGTT
TTGCTTGAGTTTCCTTTTCTCTGTATTACTTACATAGAGGTGCATCATGTACAGTACAGA
CTACAAACCACAAAAATGATAGATTGATGACTTTGTTTGGCTTTATCTACCGTTTGGATT
TGCTTAGTTGTCCTGTC