Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0582900-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:24202762:24204188:1 gene:Os12g0582900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 4 description:Similar to AP2 domain containing protein, expressed. (Os12t0582900-01)
Sequence

CAACCTCACTCACTCACTCAAGCCAAGCTAGCAATCGATCGATCGAGCTCAATGCCTCCA
TCCATGGCGACGGCGAGGGTGGCGTCACCGTCCACGGACAGGAAGCGCAAGGCCAGCAGC
GAGGACGACATAGACGCCGCCGCCGCCGCCGCCGCTCTCACCTCGCCGCTGGCGCCGGCG
AGGGGGAGGAAGCGGTTCGTCGGCGTGCGGCAGCGGCCGTCGGGGAGGTGGGTGGCGGAG
ATCAAGGACACCATCCAGAAGATCCGCGTGTGGCTCGGCACCTTCGACACCGCCGAGGAG
GCCGCCCGCGCCTACGACGAGGCCGCCTGCCTCCTCCGCGGCGCCAACACCCGCACCAAC
TTTTGGCCCCGCCCCTCGCCGCCGCCCGCCGCCGTCGCGCCACCGGAGACGACGACGACG
CCGGCGCTGCCGTCCAAGGTCACCAACTTGCTACTGCTCCGCCTCAAGGCTCGCAACCAG
CAGGTCGTCGACGCCGGCGCCGCGGCGCCGCAAGAAGCCGCTCTGTTGCAGCTGCAGCAG
CAGACGCCGGCGTCGTGCCAGGAGGTGTTCGTCCGTAGCCACGGCGAGGAGTACGGCTTC
CACGTCGACGACTTCCTCAGCGACGCGTGCAGCAACGAGCAGTACTCCGGCGACAGCTCG
CTGGGATTGGACGACGACGACGGCGAGGTGGAAGACGAGGAGGAGGAGGAGCTCGACTTC
CAGTTCATGGACGTCGCGCCCGGGGCGTCGTCGGCGGCGGCGGAGGCGGGGCTAGGCGGC
GAGGGCGCGCTGTGCTCGCCGTTCGAGATGGTCGCCGCGGAGCTCGGCGGCGCGGTGGAC
GTGGCCGCGCACGACGCGATGAGGCAGATGGACTACGAGAGGAAGATCTCCGCGTCGCTC
TACGCGCTCACCGGCGTCTCCGAGTGCCTCCGGATCCGCGCCGCCGCCGGCGCCACCGCC
GCTGCGCGGGACCACCTCACCGGCCTGAGAGAGGCTTGCCGGAAGAAGCAGAAATTCGCC
GCCGCCGCGGCGGCGCCGCCACAGCAGCAAGAACCATCTCCTCCTCCACAGCAGCCTGAG
ACGCCGGCGAGCTCAGGCGGCGGCATGTCGGAGACGGCGAGCGGCGGCGGCGGCGACGGC
GACGTGCTGATGTGGAGCTCACTGGACTTGGCTCCGATTTGCCACATGGCATAG

Peptide Sequence

PEP ID

Os12t0582900-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:24202762:24204188:1 gene:Os12g0582900 transcript:Os12t0582900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 4 description:Similar to AP2 domain containing protein, expressed. (Os12t0582900-01)
Sequence

QPHSLTQAKLAIDRSSSMPPSMATARVASPSTDRKRKASSEDDIDAAAAAAALTSPLAPA
RGRKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANTRTN
FWPRPSPPPAAVAPPETTTTPALPSKVTNLLLLRLKARNQQVVDAGAAAPQEAALLQLQQ
QTPASCQEVFVRSHGEEYGFHVDDFLSDACSNEQYSGDSSLGLDDDDGEVEDEEEEELDF
QFMDVAPGASSAAAEAGLGGEGALCSPFEMVAAELGGAVDVAAHDAMRQMDYERKISASL
YALTGVSECLRIRAAAGATAAARDHLTGLREACRKKQKFAAAAAAPPQQQEPSPPPQQPE
TPASSGGGMSETASGGGGDGDVLMWSSLDLAPICHMA

Transcript Sequence

Transcript ID

Os12t0582900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:24202762:24204188:1 gene:Os12g0582900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 4 description:Similar to AP2 domain containing protein, expressed. (Os12t0582900-01)
Sequence

CCAACCTCACTCACTCACTCAAGCCAAGCTAGCAATCGATCGATCGAGCTCAATGCCTCC
ATCCATGGCGACGGCGAGGGTGGCGTCACCGTCCACGGACAGGAAGCGCAAGGCCAGCAG
CGAGGACGACATAGACGCCGCCGCCGCCGCCGCCGCTCTCACCTCGCCGCTGGCGCCGGC
GAGGGGGAGGAAGCGGTTCGTCGGCGTGCGGCAGCGGCCGTCGGGGAGGTGGGTGGCGGA
GATCAAGGACACCATCCAGAAGATCCGCGTGTGGCTCGGCACCTTCGACACCGCCGAGGA
GGCCGCCCGCGCCTACGACGAGGCCGCCTGCCTCCTCCGCGGCGCCAACACCCGCACCAA
CTTTTGGCCCCGCCCCTCGCCGCCGCCCGCCGCCGTCGCGCCACCGGAGACGACGACGAC
GCCGGCGCTGCCGTCCAAGGTCACCAACTTGCTACTGCTCCGCCTCAAGGCTCGCAACCA
GCAGGTCGTCGACGCCGGCGCCGCGGCGCCGCAAGAAGCCGCTCTGTTGCAGCTGCAGCA
GCAGACGCCGGCGTCGTGCCAGGAGGTGTTCGTCCGTAGCCACGGCGAGGAGTACGGCTT
CCACGTCGACGACTTCCTCAGCGACGCGTGCAGCAACGAGCAGTACTCCGGCGACAGCTC
GCTGGGATTGGACGACGACGACGGCGAGGTGGAAGACGAGGAGGAGGAGGAGCTCGACTT
CCAGTTCATGGACGTCGCGCCCGGGGCGTCGTCGGCGGCGGCGGAGGCGGGGCTAGGCGG
CGAGGGCGCGCTGTGCTCGCCGTTCGAGATGGTCGCCGCGGAGCTCGGCGGCGCGGTGGA
CGTGGCCGCGCACGACGCGATGAGGCAGATGGACTACGAGAGGAAGATCTCCGCGTCGCT
CTACGCGCTCACCGGCGTCTCCGAGTGCCTCCGGATCCGCGCCGCCGCCGGCGCCACCGC
CGCTGCGCGGGACCACCTCACCGGCCTGAGAGAGGCTTGCCGGAAGAAGCAGAAATTCGC
CGCCGCCGCGGCGGCGCCGCCACAGCAGCAAGAACCATCTCCTCCTCCACAGCAGCCTGA
GACGCCGGCGAGCTCAGGCGGCGGCATGTCGGAGACGGCGAGCGGCGGCGGCGGCGACGG
CGACGTGCTGATGTGGAGCTCACTGGACTTGGCTCCGATTTGCCACATGGCATAGTTATT
ATTAGTAGTAAACACCATACTTAATTAGGGCTGTGGAATTTCTTGGTGATGACATGCATG
CATGGCTGATGGCTCAGACGAGAGCTCTGGAAATTATTAGCTTTGCTTAGCTTTGCCCCA
ATTGTTTTGTTCAACAGCAAAAAATAAAGTTTAGTTATCCTCTCTGATCATCTCATATAA
ACCACAAATTATAGATAATGAAGTGTTTGATGTGTTTGTTCATGATT