Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0581900-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:24145596:24146549:-1 gene:Os12g0581900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-like domain containing protein. (Os12t0581900-01)
Sequence

ATGGAGCAGGCAGACGAGTCGTCGGTGAACAAAGAGAGCTCAGAGCAGCAGCAGCTTACC
AGCGAGCAAGATGATGACGGCGCGACATGGCTGAGCCTCACTCTTGCCACACAGGGATCA
CCAGAAGAAGCAACAGCCGAAGCAGAAGAAACAGAAGCAGCAAACTGCTCGGAGTCTGAG
GCTCCCAAGCCTTCTTCTGCACCACACAAGGTGTTCTCATGTAACTTCTGCATGAGGAAG
TTCTTCAGCTCGCAGGCTCTGGGCGGCCATCAGAACGCTCACAAGCGAGAGCGGAGCGCC
GCAAAACGCTCCTACCATGCGCAGAGGATGATGATGGGGCTGCCTCTTGAGGCACATGCT
GCCTTTGTGCACTCCCTGAGAGTAAACCAGAGCTCAGTGATTCAGAAGGCAAGCCAGCAA
GCACAGATCAGGACAGCACCAAGGTTTCATGAAGGCAGCATCAGCTGGCCACCGATTGCT
TATGAGGAGGTGCCGAATTCGACATGGCCAGGGAGCTTCAGATTGAGATCACAGCCTTCA
GACCAACCATCAGAACAGAGTAAGATAGACTTAAATCTCAGGCTTTGA

Peptide Sequence

PEP ID

Os12t0581900-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:24145596:24146549:-1 gene:Os12g0581900 transcript:Os12t0581900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-like domain containing protein. (Os12t0581900-01)
Sequence

MEQADESSVNKESSEQQQLTSEQDDDGATWLSLTLATQGSPEEATAEAEETEAANCSESE
APKPSSAPHKVFSCNFCMRKFFSSQALGGHQNAHKRERSAAKRSYHAQRMMMGLPLEAHA
AFVHSLRVNQSSVIQKASQQAQIRTAPRFHEGSISWPPIAYEEVPNSTWPGSFRLRSQPS
DQPSEQSKIDLNLRL

Transcript Sequence

Transcript ID

Os12t0581900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:24145596:24146549:-1 gene:Os12g0581900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-like domain containing protein. (Os12t0581900-01)
Sequence

ATACATGAGTTGCAAACCTGAGAGCCAGAAAGCTTGAACCACTTACATGGTAGGAGATGG
AGCAGGCAGACGAGTCGTCGGTGAACAAAGAGAGCTCAGAGCAGCAGCAGCTTACCAGCG
AGCAAGATGATGACGGCGCGACATGGCTGAGCCTCACTCTTGCCACACAGGGATCACCAG
AAGAAGCAACAGCCGAAGCAGAAGAAACAGAAGCAGCAAACTGCTCGGAGTCTGAGGCTC
CCAAGCCTTCTTCTGCACCACACAAGGTGTTCTCATGTAACTTCTGCATGAGGAAGTTCT
TCAGCTCGCAGGCTCTGGGCGGCCATCAGAACGCTCACAAGCGAGAGCGGAGCGCCGCAA
AACGCTCCTACCATGCGCAGAGGATGATGATGGGGCTGCCTCTTGAGGCACATGCTGCCT
TTGTGCACTCCCTGAGAGTAAACCAGAGCTCAGTGATTCAGAAGGCAAGCCAGCAAGCAC
AGATCAGGACAGCACCAAGGTTTCATGAAGGCAGCATCAGCTGGCCACCGATTGCTTATG
AGGAGGTGCCGAATTCGACATGGCCAGGGAGCTTCAGATTGAGATCACAGCCTTCAGACC
AACCATCAGAACAGAGTAAGATAGACTTAAATCTCAGGCTTTGATAGGTTGATGTACAAC
TCTGACCAGTACATAAGTCCCTCCTCAAGCTTGTCCTTCTGAATAAATGAGTTTGAAGTA
ATCAATAGGTTCAGCTCACCATCAGATCAAAATCATATGGTGGTACTGAACTTCGAAGGT
ATTGTTGTTCATTTGGAATTCTTGGCAGAATTATTGAAAAAAAAATTCAGAGACAAGTTA
CTGCACTAATTTTATAGCTAGAAACTTATTAGCATGATCATAGTTGATTCAACTGTGAAG
AAAGACATGCATTCCGCAGCAATTCTTACACGAAGAATATATCCCGTCTTTATC