Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0579000-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:23960548:23968065:1 gene:Os12g0579000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leo1-like protein family protein. (Os12t0579000-01)
Sequence	ATGGCGGGCGGCGACAGGGAGAGGGATGTCGAGGAGGAGACGAGGAACCAGATGATGCAG AATCTCTTCGGCGACCAGTCGGAGGAGGAGGAGGAGGACGACGACGAGGCCGTCGATTTC GTCGACGAGGACGACCACCCGCATCCGCATCAGCAGCAGCAGCAGCTTCGCCACCAGGTG GTGGATGACGACGACGACGACGACGCCCACGCCCGCTCCGGCTACCACTCGGAAGAAGTG GAAGGTGAGGCTGATAATGGAGGGGAAGGTGAAGCGGAAGGAGAAGGTGAAAGTGAGGGG CAAGTTGGGATGGAAGAAGAAAGTGAAGCTGAAGCTCATCGTGCTGATCTTGATCAAGGA GAAAGTGATGGGGAAAAGGTCCAGAGCTCCCCAGGAGAACTTAGTGACCGGGTGATGCAA AATGATGCAGCAGGCATGGATAGTGAAGATGAAGCCTATCAACAGCGGCCAGTAGCTAGC AGAAGAAGAGGAGTTGTTGCCTCTGAATCTGAGGGGTCTGAAGATGACTATTATGCTGGT CGAGCTCATGAAGATGAGGAACCTCGTCAAACAAGGAAAGCATCAAGCTCGCCAGTTGAG GAGGAGAGAGATCAGGAAGTTGTCCGTGATGTATTTGGTGAAAGCGATGAAGATGAACCT GCTCCATATCGTGATCAACAAGAAATTGATGAAGATTCCCATAGATCACCCATGGAAGAT GAAGGTCACTATGAGAAGGATTTGCAGCCCGACGATGTAGTGGCTGATGAAGATATGAGA TATGAATCAGATGAAAATCGTGAACTGAAACCAAAAGAGAAACCAGTTGGTCCACCGCTG AACCTGGTGGTTCCACTTAAGCAGCCACCAGCTCAACCCGAGAGAATGAATGTGATCAAG GTATCAAATATTATGGGGATTGACCCAAAGCCTTTTGATCCTAAAACATATGTGGAGGAG GATGTATTTGTTACAGATGAATCTGGGACCAAAAAAAGGATACGACTGGAGGACAATATT GTGCGGTGGAGAACCGTTAAGAATGCTAATGGCACTACATCTTGTGAAAGTAATGCGCGC ATTGTAAAATGGAAAGATGGGACCATGCAGCTGCTGATTGGCAATGAAGTTCTTGATATA TCTGTTCATGAAGCACATCATGATCAGTCCCATCTGTTTCTGAGGAATGGGAAGGGAGTC CTTCAATCACAAGGAAGGCTCTTACGGAAAATGAGATTCATGCCATCTTCCTTGTCTTCG AAATCACATCGTTTATTAACTGCTCTTGTTGATTCTCAGAATAAGAAAACGGTTAAGATG CAAAAATGGATCGAATCTAAGGATCCAGAGAGAGTGAAGCAGGAAAAAGAAAGGGCCTTG GGCCAAAATATTCGAGCCCATTCAATTCTTCAACGCAAAAGAGAAAAGGTTAGCCGCAAG TACACACAGCCCGCCAGGCAAAGAAGGCAGCTTTCTCCCGGATTTTTGGAAGATGCATTA GATGAGGATGAGGAACCTGACCATCAATATGGTTCTCGCCGAATGCCAGCACGTAGTCGT TTTGGGGATGAACTGGAGGCTGAAGCACTAGCTGAGAGGCGCATAGTTAGTGCAAAGAAG TCAAGTATGGGCAGAAACATTCCTCGCAAACCATCCTTTCCTGCTCGTCCGCCTAGACGA CAGGAAAATGAATATTCTGAGAGTGAAAGGGAGGAGTCAGAGTATGAAACTGAAGGAGAG GATATTGAGCACTCACCAACCCAGGGGAGGGAAGATGAGCTTGATGAAGAGGATGAATAT GAGGAAGATGTGGAAGAAGAAGCAGCTATGTCAGATGAAGAAATCGAGGAACCAAAACGG AGGAGAGAATCTGGGGGTGCCAGTGCCAGCCAAAGGCGCAAGGAGATCGACTCGGATGAT GATTCTCCTCCAAGAAAACAACAGGCAGTTCATCGTCGGAAGGCAGTCGTTTTTGACAGT GATGACGAATGA

Peptide Sequence

PEP ID	Os12t0579000-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:23960548:23968065:1 gene:Os12g0579000 transcript:Os12t0579000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leo1-like protein family protein. (Os12t0579000-01)
Sequence	MAGGDRERDVEEETRNQMMQNLFGDQSEEEEEDDDEAVDFVDEDDHPHPHQQQQQLRHQV VDDDDDDDAHARSGYHSEEVEGEADNGGEGEAEGEGESEGQVGMEEESEAEAHRADLDQG ESDGEKVQSSPGELSDRVMQNDAAGMDSEDEAYQQRPVASRRRGVVASESEGSEDDYYAG RAHEDEEPRQTRKASSSPVEEERDQEVVRDVFGESDEDEPAPYRDQQEIDEDSHRSPMED EGHYEKDLQPDDVVADEDMRYESDENRELKPKEKPVGPPLNLVVPLKQPPAQPERMNVIK VSNIMGIDPKPFDPKTYVEEDVFVTDESGTKKRIRLEDNIVRWRTVKNANGTTSCESNAR IVKWKDGTMQLLIGNEVLDISVHEAHHDQSHLFLRNGKGVLQSQGRLLRKMRFMPSSLSS KSHRLLTALVDSQNKKTVKMQKWIESKDPERVKQEKERALGQNIRAHSILQRKREKVSRK YTQPARQRRQLSPGFLEDALDEDEEPDHQYGSRRMPARSRFGDELEAEALAERRIVSAKK SSMGRNIPRKPSFPARPPRRQENEYSESEREESEYETEGEDIEHSPTQGREDELDEEDEY EEDVEEEAAMSDEEIEEPKRRRESGGASASQRRKEIDSDDDSPPRKQQAVHRRKAVVFDS DDE

Transcript Sequence

Transcript ID	Os12t0579000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:23960548:23968065:1 gene:Os12g0579000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leo1-like protein family protein. (Os12t0579000-01)
Sequence	GATTTTAGTCTCACGAACTGCTGGGAGGCTAGGGTTCCCGGCGGCTCCCCTTGCGCCACC GCGCCGCGGCCGTCTTCTCGCCGCCGACGCTGAGACAGGCCGCGCCGCCGCTCCTCTCCA CGCGCCGGTCCGGTCCGGTCCGTCGCCGTTCGGTGCTCCGAGCTCGCTCAACCAGCGGCG ATGGCGGGCGGCGACAGGGAGAGGGATGTCGAGGAGGAGACGAGGAACCAGATGATGCAG AATCTCTTCGGCGACCAGTCGGAGGAGGAGGAGGAGGACGACGACGAGGCCGTCGATTTC GTCGACGAGGACGACCACCCGCATCCGCATCAGCAGCAGCAGCAGCTTCGCCACCAGGTG GTGGATGACGACGACGACGACGACGCCCACGCCCGCTCCGGCTACCACTCGGAAGAAGTG GAAGGTGAGGCTGATAATGGAGGGGAAGGTGAAGCGGAAGGAGAAGGTGAAAGTGAGGGG CAAGTTGGGATGGAAGAAGAAAGTGAAGCTGAAGCTCATCGTGCTGATCTTGATCAAGGA GAAAGTGATGGGGAAAAGGTCCAGAGCTCCCCAGGAGAACTTAGTGACCGGGTGATGCAA AATGATGCAGCAGGCATGGATAGTGAAGATGAAGCCTATCAACAGCGGCCAGTAGCTAGC AGAAGAAGAGGAGTTGTTGCCTCTGAATCTGAGGGGTCTGAAGATGACTATTATGCTGGT CGAGCTCATGAAGATGAGGAACCTCGTCAAACAAGGAAAGCATCAAGCTCGCCAGTTGAG GAGGAGAGAGATCAGGAAGTTGTCCGTGATGTATTTGGTGAAAGCGATGAAGATGAACCT GCTCCATATCGTGATCAACAAGAAATTGATGAAGATTCCCATAGATCACCCATGGAAGAT GAAGGTCACTATGAGAAGGATTTGCAGCCCGACGATGTAGTGGCTGATGAAGATATGAGA TATGAATCAGATGAAAATCGTGAACTGAAACCAAAAGAGAAACCAGTTGGTCCACCGCTG AACCTGGTGGTTCCACTTAAGCAGCCACCAGCTCAACCCGAGAGAATGAATGTGATCAAG GTATCAAATATTATGGGGATTGACCCAAAGCCTTTTGATCCTAAAACATATGTGGAGGAG GATGTATTTGTTACAGATGAATCTGGGACCAAAAAAAGGATACGACTGGAGGACAATATT GTGCGGTGGAGAACCGTTAAGAATGCTAATGGCACTACATCTTGTGAAAGTAATGCGCGC ATTGTAAAATGGAAAGATGGGACCATGCAGCTGCTGATTGGCAATGAAGTTCTTGATATA TCTGTTCATGAAGCACATCATGATCAGTCCCATCTGTTTCTGAGGAATGGGAAGGGAGTC CTTCAATCACAAGGAAGGCTCTTACGGAAAATGAGATTCATGCCATCTTCCTTGTCTTCG AAATCACATCGTTTATTAACTGCTCTTGTTGATTCTCAGAATAAGAAAACGGTTAAGATG CAAAAATGGATCGAATCTAAGGATCCAGAGAGAGTGAAGCAGGAAAAAGAAAGGGCCTTG GGCCAAAATATTCGAGCCCATTCAATTCTTCAACGCAAAAGAGAAAAGGTTAGCCGCAAG TACACACAGCCCGCCAGGCAAAGAAGGCAGCTTTCTCCCGGATTTTTGGAAGATGCATTA GATGAGGATGAGGAACCTGACCATCAATATGGTTCTCGCCGAATGCCAGCACGTAGTCGT TTTGGGGATGAACTGGAGGCTGAAGCACTAGCTGAGAGGCGCATAGTTAGTGCAAAGAAG TCAAGTATGGGCAGAAACATTCCTCGCAAACCATCCTTTCCTGCTCGTCCGCCTAGACGA CAGGAAAATGAATATTCTGAGAGTGAAAGGGAGGAGTCAGAGTATGAAACTGAAGGAGAG GATATTGAGCACTCACCAACCCAGGGGAGGGAAGATGAGCTTGATGAAGAGGATGAATAT GAGGAAGATGTGGAAGAAGAAGCAGCTATGTCAGATGAAGAAATCGAGGAACCAAAACGG AGGAGAGAATCTGGGGGTGCCAGTGCCAGCCAAAGGCGCAAGGAGATCGACTCGGATGAT GATTCTCCTCCAAGAAAACAACAGGCAGTTCATCGTCGGAAGGCAGTCGTTTTTGACAGT GATGACGAATGATGAGAAGAAAAAGGTTGCAAACACCAATATTTGCTTGAGGATTGTTGT TTAGAAATAACAAAAAAAAATGTTGTCAATTGTTAATGTATTCGGGATGCTGTCTTGAAA TCAAATGTTAGCTGTGCTACCAGTTTTCCTACACTAATATAGATGATATAGTAGTATTAT TTTCTAAAAAAAAATACAGATGATCTGGTAAACCATC