Plant GARDEN How To ▶︎

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Oryza sativa

CDS Sequence

CDS ID

Os12t0579000-01

CDS Infomation

cds chromosome:IRGSP-1.0:12:23960548:23968065:1 gene:Os12g0579000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leo1-like protein family protein. (Os12t0579000-01)

Sequence

ATGGCGGGCGGCGACAGGGAGAGGGATGTCGAGGAGGAGACGAGGAACCAGATGATGCAG
AATCTCTTCGGCGACCAGTCGGAGGAGGAGGAGGAGGACGACGACGAGGCCGTCGATTTC
GTCGACGAGGACGACCACCCGCATCCGCATCAGCAGCAGCAGCAGCTTCGCCACCAGGTG
GTGGATGACGACGACGACGACGACGCCCACGCCCGCTCCGGCTACCACTCGGAAGAAGTG
GAAGGTGAGGCTGATAATGGAGGGGAAGGTGAAGCGGAAGGAGAAGGTGAAAGTGAGGGG
CAAGTTGGGATGGAAGAAGAAAGTGAAGCTGAAGCTCATCGTGCTGATCTTGATCAAGGA
GAAAGTGATGGGGAAAAGGTCCAGAGCTCCCCAGGAGAACTTAGTGACCGGGTGATGCAA
AATGATGCAGCAGGCATGGATAGTGAAGATGAAGCCTATCAACAGCGGCCAGTAGCTAGC
AGAAGAAGAGGAGTTGTTGCCTCTGAATCTGAGGGGTCTGAAGATGACTATTATGCTGGT
CGAGCTCATGAAGATGAGGAACCTCGTCAAACAAGGAAAGCATCAAGCTCGCCAGTTGAG
GAGGAGAGAGATCAGGAAGTTGTCCGTGATGTATTTGGTGAAAGCGATGAAGATGAACCT
GCTCCATATCGTGATCAACAAGAAATTGATGAAGATTCCCATAGATCACCCATGGAAGAT
GAAGGTCACTATGAGAAGGATTTGCAGCCCGACGATGTAGTGGCTGATGAAGATATGAGA
TATGAATCAGATGAAAATCGTGAACTGAAACCAAAAGAGAAACCAGTTGGTCCACCGCTG
AACCTGGTGGTTCCACTTAAGCAGCCACCAGCTCAACCCGAGAGAATGAATGTGATCAAG
GTATCAAATATTATGGGGATTGACCCAAAGCCTTTTGATCCTAAAACATATGTGGAGGAG
GATGTATTTGTTACAGATGAATCTGGGACCAAAAAAAGGATACGACTGGAGGACAATATT
GTGCGGTGGAGAACCGTTAAGAATGCTAATGGCACTACATCTTGTGAAAGTAATGCGCGC
ATTGTAAAATGGAAAGATGGGACCATGCAGCTGCTGATTGGCAATGAAGTTCTTGATATA
TCTGTTCATGAAGCACATCATGATCAGTCCCATCTGTTTCTGAGGAATGGGAAGGGAGTC
CTTCAATCACAAGGAAGGCTCTTACGGAAAATGAGATTCATGCCATCTTCCTTGTCTTCG
AAATCACATCGTTTATTAACTGCTCTTGTTGATTCTCAGAATAAGAAAACGGTTAAGATG
CAAAAATGGATCGAATCTAAGGATCCAGAGAGAGTGAAGCAGGAAAAAGAAAGGGCCTTG
GGCCAAAATATTCGAGCCCATTCAATTCTTCAACGCAAAAGAGAAAAGGTTAGCCGCAAG
TACACACAGCCCGCCAGGCAAAGAAGGCAGCTTTCTCCCGGATTTTTGGAAGATGCATTA
GATGAGGATGAGGAACCTGACCATCAATATGGTTCTCGCCGAATGCCAGCACGTAGTCGT
TTTGGGGATGAACTGGAGGCTGAAGCACTAGCTGAGAGGCGCATAGTTAGTGCAAAGAAG
TCAAGTATGGGCAGAAACATTCCTCGCAAACCATCCTTTCCTGCTCGTCCGCCTAGACGA
CAGGAAAATGAATATTCTGAGAGTGAAAGGGAGGAGTCAGAGTATGAAACTGAAGGAGAG
GATATTGAGCACTCACCAACCCAGGGGAGGGAAGATGAGCTTGATGAAGAGGATGAATAT
GAGGAAGATGTGGAAGAAGAAGCAGCTATGTCAGATGAAGAAATCGAGGAACCAAAACGG
AGGAGAGAATCTGGGGGTGCCAGTGCCAGCCAAAGGCGCAAGGAGATCGACTCGGATGAT
GATTCTCCTCCAAGAAAACAACAGGCAGTTCATCGTCGGAAGGCAGTCGTTTTTGACAGT
GATGACGAATGA

Peptide Sequence

PEP ID

Os12t0579000-01

PEP Infomation

pep chromosome:IRGSP-1.0:12:23960548:23968065:1 gene:Os12g0579000 transcript:Os12t0579000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leo1-like protein family protein. (Os12t0579000-01)

Sequence

MAGGDRERDVEEETRNQMMQNLFGDQSEEEEEDDDEAVDFVDEDDHPHPHQQQQQLRHQV
VDDDDDDDAHARSGYHSEEVEGEADNGGEGEAEGEGESEGQVGMEEESEAEAHRADLDQG
ESDGEKVQSSPGELSDRVMQNDAAGMDSEDEAYQQRPVASRRRGVVASESEGSEDDYYAG
RAHEDEEPRQTRKASSSPVEEERDQEVVRDVFGESDEDEPAPYRDQQEIDEDSHRSPMED
EGHYEKDLQPDDVVADEDMRYESDENRELKPKEKPVGPPLNLVVPLKQPPAQPERMNVIK
VSNIMGIDPKPFDPKTYVEEDVFVTDESGTKKRIRLEDNIVRWRTVKNANGTTSCESNAR
IVKWKDGTMQLLIGNEVLDISVHEAHHDQSHLFLRNGKGVLQSQGRLLRKMRFMPSSLSS
KSHRLLTALVDSQNKKTVKMQKWIESKDPERVKQEKERALGQNIRAHSILQRKREKVSRK
YTQPARQRRQLSPGFLEDALDEDEEPDHQYGSRRMPARSRFGDELEAEALAERRIVSAKK
SSMGRNIPRKPSFPARPPRRQENEYSESEREESEYETEGEDIEHSPTQGREDELDEEDEY
EEDVEEEAAMSDEEIEEPKRRRESGGASASQRRKEIDSDDDSPPRKQQAVHRRKAVVFDS
DDE

Transcript Sequence

Transcript ID

Os12t0579000-01

Transcript Infomation

cdna chromosome:IRGSP-1.0:12:23960548:23968065:1 gene:Os12g0579000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leo1-like protein family protein. (Os12t0579000-01)

Sequence

GATTTTAGTCTCACGAACTGCTGGGAGGCTAGGGTTCCCGGCGGCTCCCCTTGCGCCACC
GCGCCGCGGCCGTCTTCTCGCCGCCGACGCTGAGACAGGCCGCGCCGCCGCTCCTCTCCA
CGCGCCGGTCCGGTCCGGTCCGTCGCCGTTCGGTGCTCCGAGCTCGCTCAACCAGCGGCG
ATGGCGGGCGGCGACAGGGAGAGGGATGTCGAGGAGGAGACGAGGAACCAGATGATGCAG
AATCTCTTCGGCGACCAGTCGGAGGAGGAGGAGGAGGACGACGACGAGGCCGTCGATTTC
GTCGACGAGGACGACCACCCGCATCCGCATCAGCAGCAGCAGCAGCTTCGCCACCAGGTG
GTGGATGACGACGACGACGACGACGCCCACGCCCGCTCCGGCTACCACTCGGAAGAAGTG
GAAGGTGAGGCTGATAATGGAGGGGAAGGTGAAGCGGAAGGAGAAGGTGAAAGTGAGGGG
CAAGTTGGGATGGAAGAAGAAAGTGAAGCTGAAGCTCATCGTGCTGATCTTGATCAAGGA
GAAAGTGATGGGGAAAAGGTCCAGAGCTCCCCAGGAGAACTTAGTGACCGGGTGATGCAA
AATGATGCAGCAGGCATGGATAGTGAAGATGAAGCCTATCAACAGCGGCCAGTAGCTAGC
AGAAGAAGAGGAGTTGTTGCCTCTGAATCTGAGGGGTCTGAAGATGACTATTATGCTGGT
CGAGCTCATGAAGATGAGGAACCTCGTCAAACAAGGAAAGCATCAAGCTCGCCAGTTGAG
GAGGAGAGAGATCAGGAAGTTGTCCGTGATGTATTTGGTGAAAGCGATGAAGATGAACCT
GCTCCATATCGTGATCAACAAGAAATTGATGAAGATTCCCATAGATCACCCATGGAAGAT
GAAGGTCACTATGAGAAGGATTTGCAGCCCGACGATGTAGTGGCTGATGAAGATATGAGA
TATGAATCAGATGAAAATCGTGAACTGAAACCAAAAGAGAAACCAGTTGGTCCACCGCTG
AACCTGGTGGTTCCACTTAAGCAGCCACCAGCTCAACCCGAGAGAATGAATGTGATCAAG
GTATCAAATATTATGGGGATTGACCCAAAGCCTTTTGATCCTAAAACATATGTGGAGGAG
GATGTATTTGTTACAGATGAATCTGGGACCAAAAAAAGGATACGACTGGAGGACAATATT
GTGCGGTGGAGAACCGTTAAGAATGCTAATGGCACTACATCTTGTGAAAGTAATGCGCGC
ATTGTAAAATGGAAAGATGGGACCATGCAGCTGCTGATTGGCAATGAAGTTCTTGATATA
TCTGTTCATGAAGCACATCATGATCAGTCCCATCTGTTTCTGAGGAATGGGAAGGGAGTC
CTTCAATCACAAGGAAGGCTCTTACGGAAAATGAGATTCATGCCATCTTCCTTGTCTTCG
AAATCACATCGTTTATTAACTGCTCTTGTTGATTCTCAGAATAAGAAAACGGTTAAGATG
CAAAAATGGATCGAATCTAAGGATCCAGAGAGAGTGAAGCAGGAAAAAGAAAGGGCCTTG
GGCCAAAATATTCGAGCCCATTCAATTCTTCAACGCAAAAGAGAAAAGGTTAGCCGCAAG
TACACACAGCCCGCCAGGCAAAGAAGGCAGCTTTCTCCCGGATTTTTGGAAGATGCATTA
GATGAGGATGAGGAACCTGACCATCAATATGGTTCTCGCCGAATGCCAGCACGTAGTCGT
TTTGGGGATGAACTGGAGGCTGAAGCACTAGCTGAGAGGCGCATAGTTAGTGCAAAGAAG
TCAAGTATGGGCAGAAACATTCCTCGCAAACCATCCTTTCCTGCTCGTCCGCCTAGACGA
CAGGAAAATGAATATTCTGAGAGTGAAAGGGAGGAGTCAGAGTATGAAACTGAAGGAGAG
GATATTGAGCACTCACCAACCCAGGGGAGGGAAGATGAGCTTGATGAAGAGGATGAATAT
GAGGAAGATGTGGAAGAAGAAGCAGCTATGTCAGATGAAGAAATCGAGGAACCAAAACGG
AGGAGAGAATCTGGGGGTGCCAGTGCCAGCCAAAGGCGCAAGGAGATCGACTCGGATGAT
GATTCTCCTCCAAGAAAACAACAGGCAGTTCATCGTCGGAAGGCAGTCGTTTTTGACAGT
GATGACGAATGATGAGAAGAAAAAGGTTGCAAACACCAATATTTGCTTGAGGATTGTTGT
TTAGAAATAACAAAAAAAAATGTTGTCAATTGTTAATGTATTCGGGATGCTGTCTTGAAA
TCAAATGTTAGCTGTGCTACCAGTTTTCCTACACTAATATAGATGATATAGTAGTATTAT
TTTCTAAAAAAAAATACAGATGATCTGGTAAACCATC