Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0577200-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:23850905:23852346:1 gene:Os12g0577200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0577200-01)
Sequence

ATGAGGAGAGGAGGCTTCCATGGCGCGGCGGCGGCGTCGCCGACGACGGTGGCGAGGGCG
GGGAGGGTGATGAGGGCGGCGGTGGCGGCGTTCTTCCATGGCTACCATTGCTACACCTCC
GTGGCGGGGCTGCTGGTGCTGCCGTTCTCGGCCGCCGTGCTGGCGTCGGGCGCCATGGCG
TCGCCGTCGTCGGGAGCGCTGGCGGCGGTGTCGGCGAGGATACGGCGCATGTTCGACGCC
GCCGGGTTCCCGCCGTCGTCGTTCTTCGCGCTGTTCAACGCCAAGCTGTCGCAGACGGTG
TTCACGTTCGCCGCCGCGCTGCCGTTCACGCTCACGTTCCTGCTCCTCGCCAAGGCGTGC
GTCGCGGCGATGCTCCGGCCGGACGACGATGGCGAAGGCGTGGCGCGGCGAGGGCGCGGC
GTGGCGAGGGCGACGCGGCTCCCGCCGTGCGGGAGCGTGGCGGGCGCGTACCCGGCGATG
GTGGCGACGCACCTGTTCGGCGCGTTCGTGATGCTGTCCGCGAACGCCGCCGTGTTCTCC
CTCATGTTCCTCGCCTTCAACGGCGCCGACCTCCTGGGCCTCACCACCACCTCCCACGCC
GCGGCGACGCTCGCGCTGTCCGCCGCGGGCGCCATCGCCTACTCGGTGGCCGTGGGGATC
GCCACCGTGGTCTGCAACCTCGCCGTGGTGGTGTCCGCCATGGAGCGCCGCGCGGGCCAC
GCCGCGGTGCTCAGGGCGTGCGTCGTCATCCGCGGCCGCGTGCCCACCGCGCTGGCGCTC
GCGCTCCCGACCAACCTCGGCATGGCCGCCGCGGAGGCGCTGTTCCAGCTCCGCGTCGTG
TCGCAGGCGCAACGCCACCGCCTCGCCGGCGCCGGCGACGGCAAGAGGCTCGCGGCGGGC
GTCGCCGGCGAGGCGTTCTCCATCGCGTACATCCACGCGCTCTGCGTCGTGCTCGAGATC
ATCGTGAGCTGCATGTTCTACCGGAGTTGCAGGAGAAGCGAGGCCGACGAGCTCAGAGAG
CTCGAGCCAGAGGAGAAGGGTGACCTCCAAGCTTGA

Peptide Sequence

PEP ID

Os12t0577200-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:23850905:23852346:1 gene:Os12g0577200 transcript:Os12t0577200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0577200-01)
Sequence

MRRGGFHGAAAASPTTVARAGRVMRAAVAAFFHGYHCYTSVAGLLVLPFSAAVLASGAMA
SPSSGALAAVSARIRRMFDAAGFPPSSFFALFNAKLSQTVFTFAAALPFTLTFLLLAKAC
VAAMLRPDDDGEGVARRGRGVARATRLPPCGSVAGAYPAMVATHLFGAFVMLSANAAVFS
LMFLAFNGADLLGLTTTSHAAATLALSAAGAIAYSVAVGIATVVCNLAVVVSAMERRAGH
AAVLRACVVIRGRVPTALALALPTNLGMAAAEALFQLRVVSQAQRHRLAGAGDGKRLAAG
VAGEAFSIAYIHALCVVLEIIVSCMFYRSCRRSEADELRELEPEEKGDLQA

Transcript Sequence

Transcript ID

Os12t0577200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:23850905:23852346:1 gene:Os12g0577200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0577200-01)
Sequence

GAGTCCATTGCATCGCCCATTTCGCTCATGGATCAGTAGGTAGCCAATCATTCTAGCTTC
CATCTCAAAAACCAGTAGCACATCATCATCATCATCATCATCTCAACCTCAATCTCAAGC
TACAAAATCCTCCAAGAATTCCAAGAAACCAAAGGCTTGACACTATTGCATTGGATTGGC
GGCATGAGGAGAGGAGGCTTCCATGGCGCGGCGGCGGCGTCGCCGACGACGGTGGCGAGG
GCGGGGAGGGTGATGAGGGCGGCGGTGGCGGCGTTCTTCCATGGCTACCATTGCTACACC
TCCGTGGCGGGGCTGCTGGTGCTGCCGTTCTCGGCCGCCGTGCTGGCGTCGGGCGCCATG
GCGTCGCCGTCGTCGGGAGCGCTGGCGGCGGTGTCGGCGAGGATACGGCGCATGTTCGAC
GCCGCCGGGTTCCCGCCGTCGTCGTTCTTCGCGCTGTTCAACGCCAAGCTGTCGCAGACG
GTGTTCACGTTCGCCGCCGCGCTGCCGTTCACGCTCACGTTCCTGCTCCTCGCCAAGGCG
TGCGTCGCGGCGATGCTCCGGCCGGACGACGATGGCGAAGGCGTGGCGCGGCGAGGGCGC
GGCGTGGCGAGGGCGACGCGGCTCCCGCCGTGCGGGAGCGTGGCGGGCGCGTACCCGGCG
ATGGTGGCGACGCACCTGTTCGGCGCGTTCGTGATGCTGTCCGCGAACGCCGCCGTGTTC
TCCCTCATGTTCCTCGCCTTCAACGGCGCCGACCTCCTGGGCCTCACCACCACCTCCCAC
GCCGCGGCGACGCTCGCGCTGTCCGCCGCGGGCGCCATCGCCTACTCGGTGGCCGTGGGG
ATCGCCACCGTGGTCTGCAACCTCGCCGTGGTGGTGTCCGCCATGGAGCGCCGCGCGGGC
CACGCCGCGGTGCTCAGGGCGTGCGTCGTCATCCGCGGCCGCGTGCCCACCGCGCTGGCG
CTCGCGCTCCCGACCAACCTCGGCATGGCCGCCGCGGAGGCGCTGTTCCAGCTCCGCGTC
GTGTCGCAGGCGCAACGCCACCGCCTCGCCGGCGCCGGCGACGGCAAGAGGCTCGCGGCG
GGCGTCGCCGGCGAGGCGTTCTCCATCGCGTACATCCACGCGCTCTGCGTCGTGCTCGAG
ATCATCGTGAGCTGCATGTTCTACCGGAGTTGCAGGAGAAGCGAGGCCGACGAGCTCAGA
GAGCTCGAGCCAGAGGAGAAGGGTGACCTCCAAGCTTGAGCTCAAGTGTAAAAGAAAGTG
TTAAAAAAATTTTAAAAATGAATAGATGTAGCATTTGAAAATTTCAAATAGGTTTGAAAT
TATGATGAGCATATATGAATTGAGATAGAATTATTCTGGAAATTGTTTTTTTGTTTTGTT
GGGAGTAAATTAATGGTATATTGGGGTTAATAAATAATGAATGGATGATTCTCTTGTACA
GT