Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0576900-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:23823838:23829525:-1 gene:Os12g0576900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride kinase 1) (DGK 1) (DAG kinase 1). (Os12t0576900-01)
Sequence	ATGTACAAGATGATGTATCCTAGCTGGAATGACATTTCAGTGTACATATCTGAGTATTGG TCTGTTATAATTGCTACAGTCATTTTTGCATCTGTTACTGGTGTGACAATTTATTATACT GTCAATCAATTGAACAAAAACATCAGCTTGAGTTTGATGAAAGCTATCAGAGCTAGGGCA AGGAAGTACAAGAAATTGAAAGATAAGGTCCCTGCCTCTTCCCACATTTGGAGAAAAGAA CTTGGCTCTCGTAGTAAAGGTCTGAAATGCTGTGTATGCTTGAAGTCTGTTTCATCTCCG CAGTATATGGGGGGAGTTATCCATCAGTGTGATATTTGTGGTGCCACTGCACATCCTAGT TGCTCAGGAAATGCGCACAAAGATTGCAAATGTGTTTCTATGGTTGGTTTTGAACATGTC ATTCATCAGTGGGCTGTACAGTGGATTGACACATCGGATCGCTCTGAGGAGGATTCTTTC TGCTGCTATTGTGATGAATCTTGCAATGGAGCTTTCCTCGCAGGTTCTCCAATTTGGTAC TGTATGTGGTGCCAACGGCTAGTGCATGTTGATTGTCACAACAACCTATCTATAGAAACT GGTGATATCTGTGACTTGGGCCCCTTGAAGCGGCTAATATTGTCACCTCTTTGTGTTAAG GAGCTCCATTGGACAGGTGCAGCAGGACTTATCAGTTCTATAACACATGGGGCTAATGAA TTGGCTTCCAATGTCCGAGAGAGGATCAGGAGTCGCGGTAAAAAGTACAGAAAGGGTACC ATTTCTGTTGATTCAGATAGCTCTGGTACTATTGACCCGCCATCTGATATTGAAGGAGAT TCACAAGAAACAAACAATGCAGCTAAAAGGAGAGAGGATCATGCCAATGGTGAACTTCCT GAAGTACATGAAAGCTCTGAATCAGAGAATGATAAACAGCTGTTGACAGAAAACAAAACT AGCATACCGAACGGCCAACATGAGGATTCACACGTACACAATAATCAGAAATATGAAATC GTGGATGTGCCTTCTGATTCTAGGCCATTGCTAGTGTTTATTAACAAGAGAAGTGGAGCA CAGTGTGGTGATTCACTGAGACAACGTTTGCAGATCCTTCTTAATCCTATCCAGGTTTTT GAGCTGGGTAAACAGCAAGGACCAGAAGTTGGTTTGACTTTGTTTAGGAAGGTACCCCAC TTCAGAGTTCTTGTTTGTGGTGGAGATGGCACCGTTGCTTGGGTCCTGGATGCCATTGAG AAACAGAAGTTTGAAGCTCCACCACCTGTGGCCATCCTTCCAGCTGGTACTGGTAATGAT CTTGCCAGGGTTTTGTCTTGGGGTGGTGGTCTCGGAATTGTTGAGAAACAGGGAGGTCTG TTCTCTGTTTTAAAAGATGTCGAGCATGCAGCAGTTACTGTTCTTGATAGATGGAAGATC ACAATAAAAGACAACCAAGGGAAGCTTATGTCACAACCAAAATATATGAACAACTACTTT GGGGTTGGCTGTGATGCAAAGGTTGCTTTAGATATCCACAATCTGAGGGAGGAAAACCCT GAACGTTTTTATAGTCAGTTTATGAACAAGGTGCTTTATGCAAAAGAGGGAGCAAAGAAT ATGATGGATAACACATTTGATTATTTTCCATGGGATGTCAAGCTTGAGATAGATGGATCC AAAATTAATATTCCTCAGAGCTACATGGGAGGAGTTGACCTGTGGAAGAACGAGGATGAT GTTTCTGACAATTTCCACCCTCAGTCAATGCATGACAAGATGCTAGAAGTAGTTAGCTTC ACTGGAATGCTGCATCTTGGAAGGCTGCAGGTAGGGCTTTCTCGCGCGCAGAGGTTAGCT CAAGGTCATCATATAAAGATCGAGATCAAAACTAAAATGCCCATTCAAGTCGATGGAGAG CCTTGGTCGCAGGATCCATGCACCATAGTAGTTTCACATCACTGCCAGGCTTTCATGCTG AAGAGAGTCTCCGAAGAACCTATCGGCCATGCGGCCTCCATAATGGCCGACGTTCTGGAA AACGCCGAGAATAACGGCATCATCACAGCGTCGCAGAAGAGGACCCTCCTCCACGAAATA GCTTCTAGGCTTTTGTAG

Peptide Sequence

PEP ID	Os12t0576900-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:23823838:23829525:-1 gene:Os12g0576900 transcript:Os12t0576900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride kinase 1) (DGK 1) (DAG kinase 1). (Os12t0576900-01)
Sequence	MYKMMYPSWNDISVYISEYWSVIIATVIFASVTGVTIYYTVNQLNKNISLSLMKAIRARA RKYKKLKDKVPASSHIWRKELGSRSKGLKCCVCLKSVSSPQYMGGVIHQCDICGATAHPS CSGNAHKDCKCVSMVGFEHVIHQWAVQWIDTSDRSEEDSFCCYCDESCNGAFLAGSPIWY CMWCQRLVHVDCHNNLSIETGDICDLGPLKRLILSPLCVKELHWTGAAGLISSITHGANE LASNVRERIRSRGKKYRKGTISVDSDSSGTIDPPSDIEGDSQETNNAAKRREDHANGELP EVHESSESENDKQLLTENKTSIPNGQHEDSHVHNNQKYEIVDVPSDSRPLLVFINKRSGA QCGDSLRQRLQILLNPIQVFELGKQQGPEVGLTLFRKVPHFRVLVCGGDGTVAWVLDAIE KQKFEAPPPVAILPAGTGNDLARVLSWGGGLGIVEKQGGLFSVLKDVEHAAVTVLDRWKI TIKDNQGKLMSQPKYMNNYFGVGCDAKVALDIHNLREENPERFYSQFMNKVLYAKEGAKN MMDNTFDYFPWDVKLEIDGSKINIPQSYMGGVDLWKNEDDVSDNFHPQSMHDKMLEVVSF TGMLHLGRLQVGLSRAQRLAQGHHIKIEIKTKMPIQVDGEPWSQDPCTIVVSHHCQAFML KRVSEEPIGHAASIMADVLENAENNGIITASQKRTLLHEIASRLL

Transcript Sequence

Transcript ID	Os12t0576900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:23823838:23829525:-1 gene:Os12g0576900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride kinase 1) (DGK 1) (DAG kinase 1). (Os12t0576900-01)
Sequence	ACCTTAATTAATCGATTAATTAATCAATTAATTTAATTACAGCATCTGCAACTTTCGCCT TCTTCCCGCAGCATCGAAGCGGAGGAGGGGAAAGGAAGGCGAGAGAGAGAGAGAGAGAGA GGAGAGGAGAGGAGCGCGTTGCGAAGGCTCTCGAATCGAGCGCGGCAATGCGAGAGAGCG GTTCTTGAGCCCCCGCGATTCGATTCTTCCGGTGCAAAGAATGTACAAGATGATGTATCC TAGCTGGAATGACATTTCAGTGTACATATCTGAGTATTGGTCTGTTATAATTGCTACAGT CATTTTTGCATCTGTTACTGGTGTGACAATTTATTATACTGTCAATCAATTGAACAAAAA CATCAGCTTGAGTTTGATGAAAGCTATCAGAGCTAGGGCAAGGAAGTACAAGAAATTGAA AGATAAGGTCCCTGCCTCTTCCCACATTTGGAGAAAAGAACTTGGCTCTCGTAGTAAAGG TCTGAAATGCTGTGTATGCTTGAAGTCTGTTTCATCTCCGCAGTATATGGGGGGAGTTAT CCATCAGTGTGATATTTGTGGTGCCACTGCACATCCTAGTTGCTCAGGAAATGCGCACAA AGATTGCAAATGTGTTTCTATGGTTGGTTTTGAACATGTCATTCATCAGTGGGCTGTACA GTGGATTGACACATCGGATCGCTCTGAGGAGGATTCTTTCTGCTGCTATTGTGATGAATC TTGCAATGGAGCTTTCCTCGCAGGTTCTCCAATTTGGTACTGTATGTGGTGCCAACGGCT AGTGCATGTTGATTGTCACAACAACCTATCTATAGAAACTGGTGATATCTGTGACTTGGG CCCCTTGAAGCGGCTAATATTGTCACCTCTTTGTGTTAAGGAGCTCCATTGGACAGGTGC AGCAGGACTTATCAGTTCTATAACACATGGGGCTAATGAATTGGCTTCCAATGTCCGAGA GAGGATCAGGAGTCGCGGTAAAAAGTACAGAAAGGGTACCATTTCTGTTGATTCAGATAG CTCTGGTACTATTGACCCGCCATCTGATATTGAAGGAGATTCACAAGAAACAAACAATGC AGCTAAAAGGAGAGAGGATCATGCCAATGGTGAACTTCCTGAAGTACATGAAAGCTCTGA ATCAGAGAATGATAAACAGCTGTTGACAGAAAACAAAACTAGCATACCGAACGGCCAACA TGAGGATTCACACGTACACAATAATCAGAAATATGAAATCGTGGATGTGCCTTCTGATTC TAGGCCATTGCTAGTGTTTATTAACAAGAGAAGTGGAGCACAGTGTGGTGATTCACTGAG ACAACGTTTGCAGATCCTTCTTAATCCTATCCAGGTTTTTGAGCTGGGTAAACAGCAAGG ACCAGAAGTTGGTTTGACTTTGTTTAGGAAGGTACCCCACTTCAGAGTTCTTGTTTGTGG TGGAGATGGCACCGTTGCTTGGGTCCTGGATGCCATTGAGAAACAGAAGTTTGAAGCTCC ACCACCTGTGGCCATCCTTCCAGCTGGTACTGGTAATGATCTTGCCAGGGTTTTGTCTTG GGGTGGTGGTCTCGGAATTGTTGAGAAACAGGGAGGTCTGTTCTCTGTTTTAAAAGATGT CGAGCATGCAGCAGTTACTGTTCTTGATAGATGGAAGATCACAATAAAAGACAACCAAGG GAAGCTTATGTCACAACCAAAATATATGAACAACTACTTTGGGGTTGGCTGTGATGCAAA GGTTGCTTTAGATATCCACAATCTGAGGGAGGAAAACCCTGAACGTTTTTATAGTCAGTT TATGAACAAGGTGCTTTATGCAAAAGAGGGAGCAAAGAATATGATGGATAACACATTTGA TTATTTTCCATGGGATGTCAAGCTTGAGATAGATGGATCCAAAATTAATATTCCTCAGAG CTACATGGGAGGAGTTGACCTGTGGAAGAACGAGGATGATGTTTCTGACAATTTCCACCC TCAGTCAATGCATGACAAGATGCTAGAAGTAGTTAGCTTCACTGGAATGCTGCATCTTGG AAGGCTGCAGGTAGGGCTTTCTCGCGCGCAGAGGTTAGCTCAAGGTCATCATATAAAGAT CGAGATCAAAACTAAAATGCCCATTCAAGTCGATGGAGAGCCTTGGTCGCAGGATCCATG CACCATAGTAGTTTCACATCACTGCCAGGCTTTCATGCTGAAGAGAGTCTCCGAAGAACC TATCGGCCATGCGGCCTCCATAATGGCCGACGTTCTGGAAAACGCCGAGAATAACGGCAT CATCACAGCGTCGCAGAAGAGGACCCTCCTCCACGAAATAGCTTCTAGGCTTTTGTAGGG CATACTTCCACGTTGATTGGAGGCTTCTTTCTGAGCCCCTGCCAAACTGGACATGATCAT TTGTACATACAAGCATGATTGTTTTTCCCCACTTTGATTGTGCTTGTGTATAGTTTGTAA ATTTTTTGTAGAGCTCGTGAGATGAGAGCATAGGTGCTTAGAGCACTACCTGGACATAAC TGGAAAGCAGTGGCTTTAGAGCTGAGAAATGTGATACCCACTGCAACCCAGTTGCCTGGC ATTCTGGCACGCTTGCTAAAGCAGTGATACCACTACACCAGTTTATTATTATTCCAGATT TCCAGTGCT