Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0575000-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:23735825:23736773:-1 gene:Os12g0575000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1118 family protein. (Os12t0575000-01)
Sequence

ATGGTGATGGACGCAGCTAGAGCGGTGGCGATGCCGTCGCTGTCGCCGGCCACCGTCGCG
GCGAGGCCGAGCAGCCGCCGCCTTCACAAGGTCGCCGCCATGGCCACCCAGAAGCCCACC
TCCGGCACAAGAAGGGGGACGACGGTGTACTTCCCGGTGGGGGAGCCGGGGCCGAGGCAG
ACGACGAGCGGGAAGGCGGCGGCGCCGCCGGTGAAGCTGCTGACGAACGTGGAGAAGCTG
CGGCTGCTGACGAAGGCGGAGAAGGCGGGGCTCCTGTCGGCGGCGGAGCGCGCCGGGCTG
TCGCTGTCGGCGGTGGAGCGGCTGGGCCTGTTGTCCAAGGCGGAGGAGCTGGAGGTGCTG
TCGGCGGCGACCGACCCGGGCACCCCCGGCGCGCTGCTCGGCGTCGCGCTGCTGCTGCTC
GCCGCCGGCCCCGCCGTCGTCTACCTCGTCCCGGAGGAGTACCCATGGGAGGTCGCCGTC
CAGGCCGTGGTCGCGCTCGCCTGCGTCGTCGGTGGCTCCACCGCCTTCGCCGCCTCCAGC
TTCGTGTCCAAGCTCCAGAGCTCGTCCAGCTGA

Peptide Sequence

PEP ID

Os12t0575000-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:23735825:23736773:-1 gene:Os12g0575000 transcript:Os12t0575000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1118 family protein. (Os12t0575000-01)
Sequence

MVMDAARAVAMPSLSPATVAARPSSRRLHKVAAMATQKPTSGTRRGTTVYFPVGEPGPRQ
TTSGKAAAPPVKLLTNVEKLRLLTKAEKAGLLSAAERAGLSLSAVERLGLLSKAEELEVL
SAATDPGTPGALLGVALLLLAAGPAVVYLVPEEYPWEVAVQAVVALACVVGGSTAFAASS
FVSKLQSSSS

Transcript Sequence

Transcript ID

Os12t0575000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:23735825:23736773:-1 gene:Os12g0575000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1118 family protein. (Os12t0575000-01)
Sequence

GAGAAGAACGAGAGGTGTACGTGTGGTGGTAGGAGAGGGAATCCATCCATGGTGATGGAC
GCAGCTAGAGCGGTGGCGATGCCGTCGCTGTCGCCGGCCACCGTCGCGGCGAGGCCGAGC
AGCCGCCGCCTTCACAAGGTCGCCGCCATGGCCACCCAGAAGCCCACCTCCGGCACAAGA
AGGGGGACGACGGTGTACTTCCCGGTGGGGGAGCCGGGGCCGAGGCAGACGACGAGCGGG
AAGGCGGCGGCGCCGCCGGTGAAGCTGCTGACGAACGTGGAGAAGCTGCGGCTGCTGACG
AAGGCGGAGAAGGCGGGGCTCCTGTCGGCGGCGGAGCGCGCCGGGCTGTCGCTGTCGGCG
GTGGAGCGGCTGGGCCTGTTGTCCAAGGCGGAGGAGCTGGAGGTGCTGTCGGCGGCGACC
GACCCGGGCACCCCCGGCGCGCTGCTCGGCGTCGCGCTGCTGCTGCTCGCCGCCGGCCCC
GCCGTCGTCTACCTCGTCCCGGAGGAGTACCCATGGGAGGTCGCCGTCCAGGCCGTGGTC
GCGCTCGCCTGCGTCGTCGGTGGCTCCACCGCCTTCGCCGCCTCCAGCTTCGTGTCCAAG
CTCCAGAGCTCGTCCAGCTGAAGCGATTACATGCTCACTGCCTTAGCTTTGAGTGATTAA
TTACCACTTAATTTGCAATTAGTGTGTAATTAAGCAGAGTATTTAGTGTGTATATCAATT
ACTGTGCCCCTACCCTACGCCTTGATTTTGTACGAGAGCATTGGTGTACCTGCAAAAATT
GTATAAAACCTAGTATTATCTGATAATTGTATCTAAATGGCTTGGCAAGGTTAATTTACC
TAGCTGATGTT