Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0572400-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:23589647:23593482:-1 gene:Os12g0572400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SC35-like splicing factor SCL30, 30 kD. (Os12t0572400-01);Similar to Pre-mRNA splicing factor (Fragment). (Os12t0572400-02)
Sequence	ATGAGGAGGTACAGCCCACCATATCGCAGTCCCCCTAGGAGGGGCTATGGTGGCAGAGGA AGAAGTCCCCCTAGGAGGGGATATGGAGGACGGAGGGAGCAGGGTTCTGGAAGTCTCTTG GTCCGCAACATCCCATTAAGCTGCAGAGGGGAGGATCTTCGAGTTCCTTTTGAAAGGTTT GGTCCTGTTCGGGATGTTTACCTGCCAAAGGATTATTACAGCGGGGAACCACGGGGATTT GCATTTGTGGAGTTCGTTGACCCTTATGATGCCTCTGAGGCTCAATATCACATGAATCGC CAGGTGTTTTTCGGCCGGGAGATAACTGTTGTTCTTGCTGCTGAGTCGCGGAAAAGGCCA GAGGAAATGCGCAGTAGAGCTAGAGTCAGGGGTTACTCTGGAAACGAAGGGCGCCGCTCT TCATATTATGGGAGGTCTCGTTCCCGTTCTCGCTCTCCCCACTATCGAGGTCGTCCACGG TCAAGGTCATACTCTCCTGCTCCAAGACGGCGAGATGACTACTCAGCTTCCCCACCGAGA AAGGATACGCACCCCACAAAATCTCCTAGGCGTCAGCCAAAAGAACATGATGAAGAGAAG AAGCGGAGATCCTACTCTCCTGCCAGTAGAGATGGCGACCCTCGCGATGCTGATAACGGT TATGAGAAGAGGTCGCCCCCACCTGACAGCGATGGATCCCCTCCACACCGGAGGTCTCCT AGGCACTCCTCAGGGTCGCCTCCAGGATCCCGCTCTAGGTCCGCCGATGTTTCCCCTGCC CGCAGCGACTGA

Peptide Sequence

PEP ID	Os12t0572400-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:23589647:23593482:-1 gene:Os12g0572400 transcript:Os12t0572400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SC35-like splicing factor SCL30, 30 kD. (Os12t0572400-01);Similar to Pre-mRNA splicing factor (Fragment). (Os12t0572400-02)
Sequence	MRRYSPPYRSPPRRGYGGRGRSPPRRGYGGRREQGSGSLLVRNIPLSCRGEDLRVPFERF GPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLAAESRKRP EEMRSRARVRGYSGNEGRRSSYYGRSRSRSRSPHYRGRPRSRSYSPAPRRRDDYSASPPR KDTHPTKSPRRQPKEHDEEKKRRSYSPASRDGDPRDADNGYEKRSPPPDSDGSPPHRRSP RHSSGSPPGSRSRSADVSPARSD

Transcript Sequence

Transcript ID	Os12t0572400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:23589647:23593482:-1 gene:Os12g0572400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SC35-like splicing factor SCL30, 30 kD. (Os12t0572400-01);Similar to Pre-mRNA splicing factor (Fragment). (Os12t0572400-02)
Sequence	CCGCATCCCCCCACCGATTTCGTCCCCTCCGGCGGCGGCGGCGGCGGCGGCGCACGGCTT CTCCGGGAGCTCTACGCGACAAAACAATGAGGAGGTACAGCCCACCATATCGCAGTCCCC CTAGGAGGGGCTATGGTGGCAGAGGAAGAAGTCCCCCTAGGAGGGGATATGGAGGACGGA GGGAGCAGGGTTCTGGAAGTCTCTTGGTCCGCAACATCCCATTAAGCTGCAGAGGGGAGG ATCTTCGAGTTCCTTTTGAAAGGTTTGGTCCTGTTCGGGATGTTTACCTGCCAAAGGATT ATTACAGCGGGGAACCACGGGGATTTGCATTTGTGGAGTTCGTTGACCCTTATGATGCCT CTGAGGCTCAATATCACATGAATCGCCAGGTGTTTTTCGGCCGGGAGATAACTGTTGTTC TTGCTGCTGAGTCGCGGAAAAGGCCAGAGGAAATGCGCAGTAGAGCTAGAGTCAGGGGTT ACTCTGGAAACGAAGGGCGCCGCTCTTCATATTATGGGAGGTCTCGTTCCCGTTCTCGCT CTCCCCACTATCGAGGTCGTCCACGGTCAAGGTCATACTCTCCTGCTCCAAGACGGCGAG ATGACTACTCAGCTTCCCCACCGAGAAAGGATACGCACCCCACAAAATCTCCTAGGCGTC AGCCAAAAGAACATGATGAAGAGAAGAAGCGGAGATCCTACTCTCCTGCCAGTAGAGATG GCGACCCTCGCGATGCTGATAACGGTTATGAGAAGAGGTCGCCCCCACCTGACAGCGATG GATCCCCTCCACACCGGAGGTCTCCTAGGCACTCCTCAGGGTCGCCTCCAGGATCCCGCT CTAGGTCCGCCGATGTTTCCCCTGCCCGCAGCGACTGACAGAACTTTGAACCAACGAAAT GGGATAGCTGCATGATCTCCACAGCACCTCCAATTCTAGTCAGTCTCCATCTTCCTTCCT GGTCCAACCAAGCTGTTTCAATTAAACCGAAGCCCTAAGCGGCGTGTTGTATTATTGCTA AGTGTGCTTGCCATGAGTTTGGTATGGCACATCGCCTGTTTGTGTGCTCATATGTTGGGA GTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTG AACATTAACTTGAAACAATGTGACATTGGTGTTGTGTACTACCACTAGTGAGCCTTGAAC TGGGTAACCGCCTATTTCCACATCTATCTATGCTTGTGAGTGCTTAGCCC