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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0572000-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:23554928:23560551:-1 gene:Os12g0572000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsMYB91, OsRS2 description:R2R3-type MYB transcription factor, Adaptive growth, Salt tolerance (Os12t0572000-01)
Sequence

ATGCAGCCGCCGCCGATGAGGGAGAGGCAGCGGTGGCGGCCTGAGGAAGACGCCATCCTC
CTCGCCTACGTCCGCCAGTATGGGCCCCGGGAGTGGAGCCTCGTGTCCCAGCGGATGAAC
CGCCCCCTCCACCGCGACGCCAAGTCCTGCCTCGAGCGCTGGAAGAACTACCTCCGCCCG
GGGATCAAGAAAGGTTCGCTCACCGACGACGAGCAGCGCCTCGTCATCCGCCTCCAGGCC
AAGCACGGCAACAAGTGGAAGAAGATCGCCGCCGAGGTCCCCGGCCGGACGGCGAAGCGG
CTGGGCAAGTGGTGGGAGGTGTTCAAGGAGAAGCAGCAGCGGGAGCTCCGGGATCGGGAT
CGCCGGCGACTCCCGCCGCCGCTGGACGGCGACGAGCGCGGCTGCGCCGGCGGGCGATAC
GACTGGCTCCTCGAGGACTTCGCCGACAAGCTCGTCAACGACCACCACCGCCGAATGATG
GCTGCCCCGATCCTCCCGCCGTGGATGTCGTCGTCGCCGTCGTCTTCTTCCTCGCCGTCG
GTGACGCTTAGCCTCGCGTCGGCGGCGGTGGCGCCGGCGCCTGCGGCGCCGCCGCCGACG
TGGGGTGGTGGTGGAGGAGGGGAGGTGGTGGTGGCGGAGTTGATGGAGTGTTGCAGGGAG
ATGGAGGAAGGGCAGAGGGCGTGGGCGGCGCACAGGAAGGAGGCGGCGTGGAGGATGAAG
AGGGTGGAGATGCAGCTGGAGACGGAGAGGGCGTGCCGGCGGCGGGAGGCGACGGAGGAG
TTCGAGGCGAAGATGAGGGCGCTGAGGGAGGAGCAGGCAGCTGCGGTGGAGCGGGTGGAG
GCGGAGTACCGGGAGAAGATGGCCGGCCTCCGCCGCGACGCGGAGGCCAAGGAGCAGAAG
ATGGCGGAGCAGTGGGCGGCCAAGCACGCCCGCCTCGCCAAGTTCCTCGACCAGGTCGCC
GCCTGCCGCCGCTGGCCGCCCGTAGAGATCAACGGCGGCGGCGGCGGCGGCCCCGGCGGC
GGCCGGTGA

Peptide Sequence

PEP ID

Os12t0572000-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:23554928:23560551:-1 gene:Os12g0572000 transcript:Os12t0572000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsMYB91, OsRS2 description:R2R3-type MYB transcription factor, Adaptive growth, Salt tolerance (Os12t0572000-01)
Sequence

MQPPPMRERQRWRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRP
GIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELRDRD
RRRLPPPLDGDERGCAGGRYDWLLEDFADKLVNDHHRRMMAAPILPPWMSSSPSSSSSPS
VTLSLASAAVAPAPAAPPPTWGGGGGGEVVVAELMECCREMEEGQRAWAAHRKEAAWRMK
RVEMQLETERACRRREATEEFEAKMRALREEQAAAVERVEAEYREKMAGLRRDAEAKEQK
MAEQWAAKHARLAKFLDQVAACRRWPPVEINGGGGGGPGGGR

Transcript Sequence

Transcript ID

Os12t0572000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:23554928:23560551:-1 gene:Os12g0572000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsMYB91, OsRS2 description:R2R3-type MYB transcription factor, Adaptive growth, Salt tolerance (Os12t0572000-01)
Sequence

CTTTTCCTCTCCTCCTCCCGTCTTTTCCACCACCACCACCCTCGCGTGCCCTAATTTCTC
GCTGCTCCTTGTCCCCCACCTCCTTTACTTGAGCTTGCTCACCACTGCCTCCATATACAG
AGAGTCTTCTCTGTATTTCTCTCTCTCAGTGGGAGGCTCACAAGAATCTTTCAGCTCACA
TCTCACTGTCCTTGCCTTTCTCTAGCTAGGTACTACTACTGCTAGTACTAACCACTGCTC
GTGTTCTTGGGACTTCTTCTTCTTCTTGTTCTTGTTCTTAAAATCATTTGGGGTTTTGAG
CTCCAGGGAGGTCCAAGAACAGAGCAGCAGGATGGTGCAGTGGCGTTTCTGAGAGCAGCA
TGAGTACTCGCACCACCGAGCTGGGATGGTCGGCGATGGCGAACACCGATGCAGCCGCCG
CCGATGAGGGAGAGGCAGCGGTGGCGGCCTGAGGAAGACGCCATCCTCCTCGCCTACGTC
CGCCAGTATGGGCCCCGGGAGTGGAGCCTCGTGTCCCAGCGGATGAACCGCCCCCTCCAC
CGCGACGCCAAGTCCTGCCTCGAGCGCTGGAAGAACTACCTCCGCCCGGGGATCAAGAAA
GGTTCGCTCACCGACGACGAGCAGCGCCTCGTCATCCGCCTCCAGGCCAAGCACGGCAAC
AAGTGGAAGAAGATCGCCGCCGAGGTCCCCGGCCGGACGGCGAAGCGGCTGGGCAAGTGG
TGGGAGGTGTTCAAGGAGAAGCAGCAGCGGGAGCTCCGGGATCGGGATCGCCGGCGACTC
CCGCCGCCGCTGGACGGCGACGAGCGCGGCTGCGCCGGCGGGCGATACGACTGGCTCCTC
GAGGACTTCGCCGACAAGCTCGTCAACGACCACCACCGCCGAATGATGGCTGCCCCGATC
CTCCCGCCGTGGATGTCGTCGTCGCCGTCGTCTTCTTCCTCGCCGTCGGTGACGCTTAGC
CTCGCGTCGGCGGCGGTGGCGCCGGCGCCTGCGGCGCCGCCGCCGACGTGGGGTGGTGGT
GGAGGAGGGGAGGTGGTGGTGGCGGAGTTGATGGAGTGTTGCAGGGAGATGGAGGAAGGG
CAGAGGGCGTGGGCGGCGCACAGGAAGGAGGCGGCGTGGAGGATGAAGAGGGTGGAGATG
CAGCTGGAGACGGAGAGGGCGTGCCGGCGGCGGGAGGCGACGGAGGAGTTCGAGGCGAAG
ATGAGGGCGCTGAGGGAGGAGCAGGCAGCTGCGGTGGAGCGGGTGGAGGCGGAGTACCGG
GAGAAGATGGCCGGCCTCCGCCGCGACGCGGAGGCCAAGGAGCAGAAGATGGCGGAGCAG
TGGGCGGCCAAGCACGCCCGCCTCGCCAAGTTCCTCGACCAGGTCGCCGCCTGCCGCCGC
TGGCCGCCCGTAGAGATCAACGGCGGCGGCGGCGGCGGCCCCGGCGGCGGCCGGTGAGCC
GCCGGACGGTGGCGCTGCATGCATGCGTAGTTGGACACCTCGCTTTCTTGCTTCTTCTTC
TCGTGTCCTTTTTACAACTGTTGGAATTCACTTCTCTCTAGAAATATGTAATCTTTTGAG
TCTCTTTTGATCATTCCAAGTTTCCTACTAGTAGCTCTATTGAATAATAAATGGACCACC
AAATTGCAAACCAAAATGGTTACAAAAGAATATCTTGAGCAGCAGTAGATTGCAATGGAA
ATAAGTTTTTTTA