Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0571900-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:23545376:23554463:1 gene:Os12g0571900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os12t0571900-01)
Sequence	ATGGACATCTACAATGTCGAGGCCGCCGAGATCCTCGCCAACGAGGCCCAGCTGCTCCCA ATCGGCGAGGCCGCTCCCATCTACGAGAAGCTGCTGTCAACTTTCCCCACTGCCGCGAAG TACTGGAAGCAGTATGTCGAAGCTTACATGTCCGCGAAGGATGATGAGGCCACCAAGCAG ATATTCAGCAGATGCTTGCTCAGTTGCCTTCAGATTAATCTCTGGCGTTGTTACATCAAC TTTATCAGGAGAGTGAACGATAAAAGGGGTTCTGATGGTTTGGAAGAGACCAAAAAGGCT TTTGATTTCATGCTGAACTATGTTGGCAATGATGTTGCTTCTGGCCCTGTTTGGATGGAT TATATTGCTTTCTTGAAGTCAATGCCGGTTGTGACACCGCAGGAAGAATCACATCGTATG ACTACTGTACGGAAAGTATATCAGAAGGCAATTTTAGTTCCAACTAATCATGTGGAGCAG CTATGGAAGGATTATGAGAATTTTGAGAATTCTGTTAGCCGCACCTTGGCAAAAGGTTTG TTATCGGAGTATCAGCCAAAGTTTAACAGTGCCAAAGCAGTATATAGAGAGCGTAAGAAA TACATTGATGATATTGATTGGAACATGCTGGCAGTTCCCCCCACAGGCTCCTACAAGGAA GAGCAACAGTGTATGGCATGGAAAAGACTTTTGGCATTTGAAAAGGGGAACCCTCAGAGG ATTGATGCTACAACTGCTAATAGGCGTGTTACCTTTACATTTGAACAATGTTTGATGTAT CTATACCATCATCCTGATATATGGTATGATTATGCCATGTGGCATGCCAAGAATGGTTCT GTGGATTCTGCAATTAAAATATTTCAACGTGCTGTAAAGGCACTCCCTGATTCAGGAGTA CTAAAGTATGCCTTTGCTGAACTGGAAGAGTCTAGAGGAGCAATTCAGCCTGCTAAAGCA ATATATGAGTCTCTTATAGCTGAGAATGCGGGAATGACTTCACTTGCACATATTCAGTTT ATTCGATTTCTAAGGAGAACTGAAGGCATTGAAGCAGCTCGTAAGTACTTTCTGGATGCT CGGAAATTGCCAGGCTGCACTTATCATGTCTATGTTGCTTACGCTACAATGGCATTTTGC CTTGACAAGGATGCAAAGGTAGCCCAAAGTGTTTTTGAAGCTGGTTTAAAGCGATTTATG CATGAGCCAGGATATATCCTTGAATATGCAGACTTCCTGTGTCGCTTAAATGACGACAGA AATGTGCGTGCTTTGTTTGAGCGAGCTCTGAGCTTACTTCCTCCTGAAGAATCTATAGAG GTGTGGAAACGATTTGCTCAATTTGAGCAAACATACGGGGATTTGTCAAGCATGTTAAAG GTGGAACAAAGAAGGAAGGAGGCTTTATCTAGGACATCCGAAGACGCCTTATCTGCCTTG GAAAACACACTTTATGACGTTGTTTCTCGATACAGCTATATGGATCTTTGGCCATGCTCA ACCAAAGAATTGGATTATCTATCAAGACATGAGTGGCTTGCAAAAAACATTGCTAATAGG GGTGACAAATCAGTTGTGCTAACTGGCGGTGCTACTTTAGGTGATATCCGAGTTGGTTCC AATAAAAAGTCGTTCCCACAATCTTCAAAGGTTGTTCGTCCTGAGATTTCTCGAATGGTT ATCTATGATCCTAGACAGATGAAAGGCCCAGACTTCTCAACCACAGCCAGTGGGTATACA AAGGAGATTGATGAAATATTGAAAAGACTTTCTCCACAGATGATGTCTTTCATCACAAAT TTGCCTGCTATTGAAGGGCCATCACCAGATATGGATATTGTGCTAAGCGTGCTGATGCAG AGTACATTGCCAGTGGGAGACAAACCAGGTTCGCAAGTTCCTGGTCCTGCCACGAGTGAC CTCTCAGGTCCTGGCAAATCAGGATTGAACCAGAATGGATCCATCCATAGACCTCCAAGA GACGGGCAACCCACGAAGCGGAAGAACTCTGAAAGGGGGCGAGCACAAGAGGAGGATGAT ACGTCGACAACAGTGCAGAGCCGAGCAATGCCGCGGGACATATTCAGGCTTAGGCAGATC CAGAGGAACCGCGGGTTGGGCCCTTCCCAGTCAGGATCAGCGGCACTGTCCAGTGGAAGT GTGTTCTCTGGAGATCAGTCAGCCAGCTCAGGCTAG

Peptide Sequence

PEP ID	Os12t0571900-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:23545376:23554463:1 gene:Os12g0571900 transcript:Os12t0571900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os12t0571900-01)
Sequence	MDIYNVEAAEILANEAQLLPIGEAAPIYEKLLSTFPTAAKYWKQYVEAYMSAKDDEATKQ IFSRCLLSCLQINLWRCYINFIRRVNDKRGSDGLEETKKAFDFMLNYVGNDVASGPVWMD YIAFLKSMPVVTPQEESHRMTTVRKVYQKAILVPTNHVEQLWKDYENFENSVSRTLAKGL LSEYQPKFNSAKAVYRERKKYIDDIDWNMLAVPPTGSYKEEQQCMAWKRLLAFEKGNPQR IDATTANRRVTFTFEQCLMYLYHHPDIWYDYAMWHAKNGSVDSAIKIFQRAVKALPDSGV LKYAFAELEESRGAIQPAKAIYESLIAENAGMTSLAHIQFIRFLRRTEGIEAARKYFLDA RKLPGCTYHVYVAYATMAFCLDKDAKVAQSVFEAGLKRFMHEPGYILEYADFLCRLNDDR NVRALFERALSLLPPEESIEVWKRFAQFEQTYGDLSSMLKVEQRRKEALSRTSEDALSAL ENTLYDVVSRYSYMDLWPCSTKELDYLSRHEWLAKNIANRGDKSVVLTGGATLGDIRVGS NKKSFPQSSKVVRPEISRMVIYDPRQMKGPDFSTTASGYTKEIDEILKRLSPQMMSFITN LPAIEGPSPDMDIVLSVLMQSTLPVGDKPGSQVPGPATSDLSGPGKSGLNQNGSIHRPPR DGQPTKRKNSERGRAQEEDDTSTTVQSRAMPRDIFRLRQIQRNRGLGPSQSGSAALSSGS VFSGDQSASSG

Transcript Sequence

Transcript ID	Os12t0571900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:23545376:23554463:1 gene:Os12g0571900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os12t0571900-01)
Sequence	AAACACATCACTCCGGCGCCCCCTGATTTCTCCGTTCGCTCGCGCCGCCTTCCGCCGGAG TAAGCTCTCCGCCGCCGTGAACTCGCCGTTCTTCCCGCCGCCGTCCTCCTCCGCTTCCTC CTCCCCTACAGTGGACTGGCGTGGGGTGGAGATCCCCCCTATCCATCCCGACCGACTCCT TTCCCCCGGAATCCGGCGCCCTCGCTGGCGGCGGCGGCGGCGGAGTTGGAGGCGATGGAC ATCTACAATGTCGAGGCCGCCGAGATCCTCGCCAACGAGGCCCAGCTGCTCCCAATCGGC GAGGCCGCTCCCATCTACGAGAAGCTGCTGTCAACTTTCCCCACTGCCGCGAAGTACTGG AAGCAGTATGTCGAAGCTTACATGTCCGCGAAGGATGATGAGGCCACCAAGCAGATATTC AGCAGATGCTTGCTCAGTTGCCTTCAGATTAATCTCTGGCGTTGTTACATCAACTTTATC AGGAGAGTGAACGATAAAAGGGGTTCTGATGGTTTGGAAGAGACCAAAAAGGCTTTTGAT TTCATGCTGAACTATGTTGGCAATGATGTTGCTTCTGGCCCTGTTTGGATGGATTATATT GCTTTCTTGAAGTCAATGCCGGTTGTGACACCGCAGGAAGAATCACATCGTATGACTACT GTACGGAAAGTATATCAGAAGGCAATTTTAGTTCCAACTAATCATGTGGAGCAGCTATGG AAGGATTATGAGAATTTTGAGAATTCTGTTAGCCGCACCTTGGCAAAAGGTTTGTTATCG GAGTATCAGCCAAAGTTTAACAGTGCCAAAGCAGTATATAGAGAGCGTAAGAAATACATT GATGATATTGATTGGAACATGCTGGCAGTTCCCCCCACAGGCTCCTACAAGGAAGAGCAA CAGTGTATGGCATGGAAAAGACTTTTGGCATTTGAAAAGGGGAACCCTCAGAGGATTGAT GCTACAACTGCTAATAGGCGTGTTACCTTTACATTTGAACAATGTTTGATGTATCTATAC CATCATCCTGATATATGGTATGATTATGCCATGTGGCATGCCAAGAATGGTTCTGTGGAT TCTGCAATTAAAATATTTCAACGTGCTGTAAAGGCACTCCCTGATTCAGGAGTACTAAAG TATGCCTTTGCTGAACTGGAAGAGTCTAGAGGAGCAATTCAGCCTGCTAAAGCAATATAT GAGTCTCTTATAGCTGAGAATGCGGGAATGACTTCACTTGCACATATTCAGTTTATTCGA TTTCTAAGGAGAACTGAAGGCATTGAAGCAGCTCGTAAGTACTTTCTGGATGCTCGGAAA TTGCCAGGCTGCACTTATCATGTCTATGTTGCTTACGCTACAATGGCATTTTGCCTTGAC AAGGATGCAAAGGTAGCCCAAAGTGTTTTTGAAGCTGGTTTAAAGCGATTTATGCATGAG CCAGGATATATCCTTGAATATGCAGACTTCCTGTGTCGCTTAAATGACGACAGAAATGTG CGTGCTTTGTTTGAGCGAGCTCTGAGCTTACTTCCTCCTGAAGAATCTATAGAGGTGTGG AAACGATTTGCTCAATTTGAGCAAACATACGGGGATTTGTCAAGCATGTTAAAGGTGGAA CAAAGAAGGAAGGAGGCTTTATCTAGGACATCCGAAGACGCCTTATCTGCCTTGGAAAAC ACACTTTATGACGTTGTTTCTCGATACAGCTATATGGATCTTTGGCCATGCTCAACCAAA GAATTGGATTATCTATCAAGACATGAGTGGCTTGCAAAAAACATTGCTAATAGGGGTGAC AAATCAGTTGTGCTAACTGGCGGTGCTACTTTAGGTGATATCCGAGTTGGTTCCAATAAA AAGTCGTTCCCACAATCTTCAAAGGTTGTTCGTCCTGAGATTTCTCGAATGGTTATCTAT GATCCTAGACAGATGAAAGGCCCAGACTTCTCAACCACAGCCAGTGGGTATACAAAGGAG ATTGATGAAATATTGAAAAGACTTTCTCCACAGATGATGTCTTTCATCACAAATTTGCCT GCTATTGAAGGGCCATCACCAGATATGGATATTGTGCTAAGCGTGCTGATGCAGAGTACA TTGCCAGTGGGAGACAAACCAGGTTCGCAAGTTCCTGGTCCTGCCACGAGTGACCTCTCA GGTCCTGGCAAATCAGGATTGAACCAGAATGGATCCATCCATAGACCTCCAAGAGACGGG CAACCCACGAAGCGGAAGAACTCTGAAAGGGGGCGAGCACAAGAGGAGGATGATACGTCG ACAACAGTGCAGAGCCGAGCAATGCCGCGGGACATATTCAGGCTTAGGCAGATCCAGAGG AACCGCGGGTTGGGCCCTTCCCAGTCAGGATCAGCGGCACTGTCCAGTGGAAGTGTGTTC TCTGGAGATCAGTCAGCCAGCTCAGGCTAGTTCAAATTTACAATTCTATGTAGCGTCATA TATCCTGATAGGGTTCTACTACAATTCTATTATAGAGTATAATTCATATCTAGGTAGGGT CTAGTTTAGTTAGGTCCCCCCCTGATGAAAGATGTATGCATAATTGCATGAGTGATGTTG GCGCGTAAATGTGTTTGTTTGACTGAAAAGGAAACGGTTTGCGATGACCACACGCAAGTT GGGAATGAGCAGTCGATATCATTTAACATCGTACC