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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0571700-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:23532610:23533191:1 gene:Os12g0571700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID ALKALIZATION FACTOR 42 description:Conserved hypothetical protein. (Os12t0571700-01)
Sequence

ATGCGCCGCCGCGTCGTCCCGGCGGCGGCGGCCGTTTCCGCCCAGCTGGCAGCCGCCCTC
CTCCTCCTCCTCCTCCTCCACGCCGTCACCGTCGTCGTCGTCGCCGGCGGCGGCGGCAGC
GAAGTGGCCGTCGACAGGTACGCGGCTGCAGGCGCGATGCTGCTGCTTCCGCGGCGGCGG
CGGCAGCAGCTGGAGGACGAGGTGGTGTTCCCGGCGGCGATGGCGGTCGTCGGAGCTGAG
CAGCTGCAGCAGGGCGGGTCCTTCAGCGGGCTCACGGCGAACAAGCAAGTCTGCCTGCAG
GGTCACTCGTGCGCCGCGTTCGCCATGCCCTACACCGGCCATGGCTGCATCTACAGAAAT
AATTGCAAGCAGTAA

Peptide Sequence

PEP ID

Os12t0571700-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:23532610:23533191:1 gene:Os12g0571700 transcript:Os12t0571700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID ALKALIZATION FACTOR 42 description:Conserved hypothetical protein. (Os12t0571700-01)
Sequence

MRRRVVPAAAAVSAQLAAALLLLLLLHAVTVVVVAGGGGSEVAVDRYAAAGAMLLLPRRR
RQQLEDEVVFPAAMAVVGAEQLQQGGSFSGLTANKQVCLQGHSCAAFAMPYTGHGCIYRN
NCKQ

Transcript Sequence

Transcript ID

Os12t0571700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:23532610:23533191:1 gene:Os12g0571700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID ALKALIZATION FACTOR 42 description:Conserved hypothetical protein. (Os12t0571700-01)
Sequence

ATATAAAGCGCGGGTGCACGATGCGCCGCCGCGTCGTCCCGGCGGCGGCGGCCGTTTCCG
CCCAGCTGGCAGCCGCCCTCCTCCTCCTCCTCCTCCTCCACGCCGTCACCGTCGTCGTCG
TCGCCGGCGGCGGCGGCAGCGAAGTGGCCGTCGACAGGTACGCGGCTGCAGGCGCGATGC
TGCTGCTTCCGCGGCGGCGGCGGCAGCAGCTGGAGGACGAGGTGGTGTTCCCGGCGGCGA
TGGCGGTCGTCGGAGCTGAGCAGCTGCAGCAGGGCGGGTCCTTCAGCGGGCTCACGGCGA
ACAAGCAAGTCTGCCTGCAGGGTCACTCGTGCGCCGCGTTCGCCATGCCCTACACCGGCC
ATGGCTGCATCTACAGAAATAATTGCAAGCAGTAAGCTAGCTTGCTATAGAGCTATCGAT
CTTATCATGTAGTATACTATAATATTGTTTATATAGTTGTTTAATTACTCATTATAATTG
ATTGTTGTAATTGAATCTCAATGTACCATGGACTGTACTAGTACTACTACTTGTCATATC
ACGCTCGTACCATGGAGCATCTTTATGGTACCGCTAGGTACC