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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0571100-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:23515075:23516013:1 gene:Os12g0571100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:METALLOTHIONEIN I-4C description:Metallothionein-like protein, ROS (reactive oxygen species) scavenger, Antioxidant (Os12t0571100-01)
Sequence

ATGTCGTGCGGTGGAAGTTGCAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAG
ATGTACCCTGACCTGGCTGAGAAGATCACCACCACCACCACTACTGCAACCACTGTCCTA
GGTGTTGCACCTGAGAAGGGGCACTCTGAGGGGGTTGGCAAGGCAGCTGAATCTGGCGAG
GCTGCCCATGGCTGCAGCTGTGGCTCCAGCTGCAGGTGCAACCCCTGCAACTGCTAA

Peptide Sequence

PEP ID

Os12t0571100-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:23515075:23516013:1 gene:Os12g0571100 transcript:Os12t0571100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:METALLOTHIONEIN I-4C description:Metallothionein-like protein, ROS (reactive oxygen species) scavenger, Antioxidant (Os12t0571100-01)
Sequence

MSCGGSCNCGSCGCGGGCGKMYPDLAEKITTTTTTATTVLGVAPEKGHSEGVGKAAESGE
AAHGCSCGSSCRCNPCNC

Transcript Sequence

Transcript ID

Os12t0571100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:23515075:23516013:1 gene:Os12g0571100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:METALLOTHIONEIN I-4C description:Metallothionein-like protein, ROS (reactive oxygen species) scavenger, Antioxidant (Os12t0571100-01)
Sequence

ATCAAGCTTTCAATCTCTCATTTCATCCAACTATACAAGTTCAAGAGTTTACAAGAGACC
CAGACGATCAAGATGTCGTGCGGTGGAAGTTGCAACTGCGGTTCCTGCGGATGCGGCGGT
GGCTGCGGAAAGATGTACCCTGACCTGGCTGAGAAGATCACCACCACCACCACTACTGCA
ACCACTGTCCTAGGTGTTGCACCTGAGAAGGGGCACTCTGAGGGGGTTGGCAAGGCAGCT
GAATCTGGCGAGGCTGCCCATGGCTGCAGCTGTGGCTCCAGCTGCAGGTGCAACCCCTGC
AACTGCTAAGGCCAAGGCGATCTATGACTGAATTGCCAATGCACCAGCCTGTCTACATGA
TGAATAAATAAAGAGTCCATCCAGTGTGATGGCTCATGCCTGTGTGAGTGTGACTGAATC
CATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGC
TGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATATAAATATTGTT
TTGTGT