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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0570700-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:23501423:23502359:1 gene:Os12g0570700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:METALLOTHIONEIN I-4A description:Similar to Metallothionein-like protein type 1. (Os12t0570700-01)
Sequence

ATGTCTTGCTGCGGAGGAAGCTGCAACTGTGGCTCTAGCTGCAAGTGCGGCAGCGGCTGC
GGAAACATGTACCCTGACCTGGCAGAGAAGACCACAAACACTTCAGCAACTATGGTCCTC
GGGGTCGCACCTGCGAAGGAGCAATTTGAGGGGGTTGGCAAGGCAGCAGAGTCTGGTGAG
GCTGCCCATGGCTGCAGCTGTGGCTCCAGCTGCAAATGCAATCCCTGCAACTGCTAA

Peptide Sequence

PEP ID

Os12t0570700-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:23501423:23502359:1 gene:Os12g0570700 transcript:Os12t0570700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:METALLOTHIONEIN I-4A description:Similar to Metallothionein-like protein type 1. (Os12t0570700-01)
Sequence

MSCCGGSCNCGSSCKCGSGCGNMYPDLAEKTTNTSATMVLGVAPAKEQFEGVGKAAESGE
AAHGCSCGSSCKCNPCNC

Transcript Sequence

Transcript ID

Os12t0570700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:23501423:23502359:1 gene:Os12g0570700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:METALLOTHIONEIN I-4A description:Similar to Metallothionein-like protein type 1. (Os12t0570700-01)
Sequence

GCACTCATCTCAAGCTTTTCTCTCTCTCTCTCTCTTTGCACTACATTCTTGAATTCACAA
CCTACAAACAATCCAAGAAGATGTCTTGCTGCGGAGGAAGCTGCAACTGTGGCTCTAGCT
GCAAGTGCGGCAGCGGCTGCGGAAACATGTACCCTGACCTGGCAGAGAAGACCACAAACA
CTTCAGCAACTATGGTCCTCGGGGTCGCACCTGCGAAGGAGCAATTTGAGGGGGTTGGCA
AGGCAGCAGAGTCTGGTGAGGCTGCCCATGGCTGCAGCTGTGGCTCCAGCTGCAAATGCA
ATCCCTGCAACTGCTAAAGGAGATGGTGATCTGCATCAGCATGCTGATGATATGTACAAG
TAAATAAAGAAGCCATTTGATGCAATGGCTCCTGTGTGTGTGTGTGTGCGACAGTGTGAG
TCAGCTTGTGTTCTTCATCCTGATGTACTAATGTGGCCTGTGAATATTGTGAGGTGTCTC
CTGCTTTACTCTCTTGTCAGAATGTAATTAGAGGCTATATATCATGGCCTTGTGATTGGA
GCACCTGAAGTTTTTACAGACAACATTATGTTTGTGTAATATAATATGGTTTACTTGTGC