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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0566400-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:23279939:23282625:1 gene:Os12g0566400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Magnesium transporter domain containing protein. (Os12t0566400-01)
Sequence

ATGGGGATCGGCCACGTGCTCGGCGTCCTCGGCGGCGCCCTCCTCGCCCACGCCGCCTAC
GCCACCATCCAGTATCGCGCCGTGCTGAAGATCACGGAGGAGGAGTTCTCGAGTCCGCCT
ATGGATGTGATGATGCAATTGCTCCTGGGGTTGGCCTTATGCATGTGGGCAGGTCTTGCT
GTTCCAGCGAAGTTCCTTTCAGTGCTCCCTCACTCTGAGGAGAATAGGATTGTTTCACTC
CCGGCTAACCTGGACTTCATGATCTTCAACCACCGCGGAAGGGCGCTACCTTCAGACCCA
GACTTGAAGCTGAAGACATGA

Peptide Sequence

PEP ID

Os12t0566400-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:23279939:23282625:1 gene:Os12g0566400 transcript:Os12t0566400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Magnesium transporter domain containing protein. (Os12t0566400-01)
Sequence

MGIGHVLGVLGGALLAHAAYATIQYRAVLKITEEEFSSPPMDVMMQLLLGLALCMWAGLA
VPAKFLSVLPHSEENRIVSLPANLDFMIFNHRGRALPSDPDLKLKT

Transcript Sequence

Transcript ID

Os12t0566400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:23279939:23282625:1 gene:Os12g0566400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Magnesium transporter domain containing protein. (Os12t0566400-01)
Sequence

GGACGGGACGAACTGCAGATCGAGTCGCATCGCGGGCGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAAGACCCGGACGCGGCGGCGCACGGCGGCAGCCGGAGAAGAG
CGGGGCGTGGCGGCAGGCAGCAGCTCGCGGGCGTCTCCTCCAGTCTTGCTAACCTCGCCG
CATGGGGATCGGCCACGTGCTCGGCGTCCTCGGCGGCGCCCTCCTCGCCCACGCCGCCTA
CGCCACCATCCAGTATCGCGCCGTGCTGAAGATCACGGAGGAGGAGTTCTCGAGTCCGCC
TATGGATGTGATGATGCAATTGCTCCTGGGGTTGGCCTTATGCATGTGGGCAGGTCTTGC
TGTTCCAGCGAAGTTCCTTTCAGTGCTCCCTCACTCTGAGGAGAATAGGATTGTTTCACT
CCCGGCTAACCTGGACTTCATGATCTTCAACCACCGCGGAAGGGCGCTACCTTCAGACCC
AGACTTGAAGCTGAAGACATGATTGAACATTTACAGTTTCTGTTATTTACCACAGTAGGA
TGATCCATCCAGTTATTTTTTTTGTGTCACTCATTGTTGAGGGGGAGAAACATTTCCAAG
AACTTAACGTCTACTATGTGTAACTCAAGTTTTTGTGTCACCTGAATTCTATATCTGTAT
ACCACTCAATCTTGTGCCAGTCCATGTGAATTACCAGTTATTCATTC