Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0566000-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:23248827:23253304:1 gene:Os12g0566000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EFFLUX BORON TRANSPORTER 1 description:Similar to Boron transporter. (Os12t0566000-01);Boron (B) transporter, Boron uptake and xylem loading (Os12t0566000-02);Similar to Boron transporter. (Os12t0566000-03)
Sequence	ATGGAGGAGAGCTTCGTGCCCCTCCGTGGCATCAAGAACGACCTCCATGGGAGGCTCCAG TGCTACAAGCAGGATTGGACCGGAGGATTCCGCGCCGGTATCAGGATCCTTGCGCCGACC ACCTACATATTCTTCGCTTCGGCCATACCGGTGATATCGTTCGGAGAGCAATTGGAGAGG AACACTGATGGTGTTCTGACAGCAGTTCAGACATTGGCATCCACTGCACTTTGTGGCATA ATCCACTCCTTTCTTGGAGGGCAGCCTCTGCTGATCCTCGGTGTGGCCGAGCCGACGGTG CTCATGTACACATTCATGTTCAACTTTGCCAAGGACAGGCCTGATCTTGGAAGGAGGCTG TTCCTCGCATGGACCGGTTGGGTTTGTGTCTGGACAGCAATTTTGCTGTTCTTGCTGGCG ATACTAGGCGCGTGCTCGATCATCAACCGGTTCACCCGCATCGCGGGTGAGCTGTTTGGG CTCCTGATTGCAATGCTCTTCATGCAGCAGGCTATCAAGGGGCTTGTTGACGAGTTCCGC ATCCCTGAGAGGGAGAACAGAAAGGCATTAGAGTTTGTTTCATCATGGAGGTTCGCCAAC GGAATGTTTGCTATCGTCTTGTCGTTTGGCCTTTTGCTCACTGCACTGCGGAGCAGGAAG GCTCGATCATGGCGCTATGGAACAGGTTGGCTCCGTGGCTTCATCGCCGACTATGGTGTC CCACTGATGGTGCTAGTATGGACAGGAGTTTCCTACATTCCATATGGTAGTGTTCCAAAA GGAATTCCACGGCGCCTTTTCAGCCCCAACCCATGGTCCCCTGGTGCATATGATAATTGG ACAGTCATCAGGGACATGCCAAATGTGCCACTCCTCTACATTATTGGTGCCTTCATACCA GCAACGATGATAGCCGTCCTGTACTACTTCGATCACAGTGTTGCTTCTCAGCTTGCTCAG CAGAAGGAGTTCAATTTGAGGAAGCCCCCATCTTTCCATTATGATTTGCTTCTCCTGGGT TTCCTGACATTATTGTGTGGCCTTATTGGTATCCCTCCGGCGAATGGTGTCATTCCACAG TCTCCAATGCATACGAAGAGTTTGGCTACTCTCAAACATCAACTACTCCGTAACCGACTA GTAGCCACAGCCCGACAAAGCATGAGCCAGAATGCGAGCTTGAGCCAGCTGTATGGCAGC ATGCAGGAAGCTTACCAGCAGATGCAGACACCACTGATTTACCAGCAACCGTCAGTCAAG GGATTGAATGAGCTCAAGGACTCAACAGTCCAAATGGCTTCAAGCATGGGCAACATCGAT GCGCCAGTTGATGAGACAGTCTTTGACATCGAGAAAGAAATCGATGACCTGCTGCCTATC GAGGTCAAGGAGCAGAGGTTGAGCAACTTGCTCCAGGCCACAATGGTTGGGGGTTGTGTT GCTGCTATGCCATTGCTCAAGAAGATCCCGACTTCTGTCCTCTGGGGCTACTTCGCCTTC ATGGCCATTGAGAGCTTGCCTGGTAACCAGTTCTGGGAGAGGATCTTGCTGCTCTTCACT GCTCCCAGCAGAAGATACAAGGTGTTAGAAGAGTACCACACCACGTTTGTCGAGACCGTG CCATTCAAGACGATAGCCATGTTCACACTCTTCCAGACAATGTATCTACTCGTCTGCTTC GGGATCACATGGATCCCGATTGCTGGGGTTCTTTTCCCCCTCATGATCATGCTGCTGGTT CCAGTCAGGCAGTACATCCTCCCAAAGCTCTTCAAAGGTGCACATCTGACTGATCTGGAT GCAGCAGAGTATGAGGAGTCACCAGCTATACCGTTCATTGCCGCGCAAGATATTGATGTT GCATTGGCGCGCACCCAGAGTGCAGAAATCCTTGATGACATTGTCACTAGAAGCCGTGGT GAAATCAAGCGCCTGAACAGTCCTAAGATCACCAGCTCCGGTGGCACACCAGTGGCAGAA CTTAAAGGAATCCGCAGCCCTTGTATCTCTGAGAGGGCATACAGCCCTTGTATCACCGAG TTGAGGCATGACCGCAGCCCTCTAGGAGGAAGAGGCAGCCCAAGGACCGGTGAGACCCGA TCGTCCAAGTTGGGCGAAGGATCAACACCAAAGTGA

Peptide Sequence

PEP ID	Os12t0566000-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:23248827:23253304:1 gene:Os12g0566000 transcript:Os12t0566000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EFFLUX BORON TRANSPORTER 1 description:Similar to Boron transporter. (Os12t0566000-01);Boron (B) transporter, Boron uptake and xylem loading (Os12t0566000-02);Similar to Boron transporter. (Os12t0566000-03)
Sequence	MEESFVPLRGIKNDLHGRLQCYKQDWTGGFRAGIRILAPTTYIFFASAIPVISFGEQLER NTDGVLTAVQTLASTALCGIIHSFLGGQPLLILGVAEPTVLMYTFMFNFAKDRPDLGRRL FLAWTGWVCVWTAILLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQQAIKGLVDEFR IPERENRKALEFVSSWRFANGMFAIVLSFGLLLTALRSRKARSWRYGTGWLRGFIADYGV PLMVLVWTGVSYIPYGSVPKGIPRRLFSPNPWSPGAYDNWTVIRDMPNVPLLYIIGAFIP ATMIAVLYYFDHSVASQLAQQKEFNLRKPPSFHYDLLLLGFLTLLCGLIGIPPANGVIPQ SPMHTKSLATLKHQLLRNRLVATARQSMSQNASLSQLYGSMQEAYQQMQTPLIYQQPSVK GLNELKDSTVQMASSMGNIDAPVDETVFDIEKEIDDLLPIEVKEQRLSNLLQATMVGGCV AAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEEYHTTFVETV PFKTIAMFTLFQTMYLLVCFGITWIPIAGVLFPLMIMLLVPVRQYILPKLFKGAHLTDLD AAEYEESPAIPFIAAQDIDVALARTQSAEILDDIVTRSRGEIKRLNSPKITSSGGTPVAE LKGIRSPCISERAYSPCITELRHDRSPLGGRGSPRTGETRSSKLGEGSTPK

Transcript Sequence

Transcript ID	Os12t0566000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:23248827:23253304:1 gene:Os12g0566000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EFFLUX BORON TRANSPORTER 1 description:Similar to Boron transporter. (Os12t0566000-01);Boron (B) transporter, Boron uptake and xylem loading (Os12t0566000-02);Similar to Boron transporter. (Os12t0566000-03)
Sequence	GCCCTCTGAGTCTCTGAAATCCTGAAGCTTCTTCTTCTTCTTCCTTCCTCCTCTTGCTCT CTTGCTCTTCCTATGCTAGCACTCTCCATGCTCTTCTTGCCCTTGTAGCATTGGCTCCTT GGTTTCCATCCATGGATCCACGCTAAATGCATTGCGAGGCTGCAAATTGGTAGCATTCCC TTCCCCGTTGCATCTGCTGCAACTATGTAAGCAGGAGTGTCTGATTTGACACGCCTGAAT ACAGCTTCTCAGATCTTCAGTTTTGTTGTTTGTCTGAGAAAAGGAGAGAGAGAGAGGCCT CTTTTGGGTCCAAGAAGAGAAAAATGGAGGAGAGCTTCGTGCCCCTCCGTGGCATCAAGA ACGACCTCCATGGGAGGCTCCAGTGCTACAAGCAGGATTGGACCGGAGGATTCCGCGCCG GTATCAGGATCCTTGCGCCGACCACCTACATATTCTTCGCTTCGGCCATACCGGTGATAT CGTTCGGAGAGCAATTGGAGAGGAACACTGATGGTGTTCTGACAGCAGTTCAGACATTGG CATCCACTGCACTTTGTGGCATAATCCACTCCTTTCTTGGAGGGCAGCCTCTGCTGATCC TCGGTGTGGCCGAGCCGACGGTGCTCATGTACACATTCATGTTCAACTTTGCCAAGGACA GGCCTGATCTTGGAAGGAGGCTGTTCCTCGCATGGACCGGTTGGGTTTGTGTCTGGACAG CAATTTTGCTGTTCTTGCTGGCGATACTAGGCGCGTGCTCGATCATCAACCGGTTCACCC GCATCGCGGGTGAGCTGTTTGGGCTCCTGATTGCAATGCTCTTCATGCAGCAGGCTATCA AGGGGCTTGTTGACGAGTTCCGCATCCCTGAGAGGGAGAACAGAAAGGCATTAGAGTTTG TTTCATCATGGAGGTTCGCCAACGGAATGTTTGCTATCGTCTTGTCGTTTGGCCTTTTGC TCACTGCACTGCGGAGCAGGAAGGCTCGATCATGGCGCTATGGAACAGGTTGGCTCCGTG GCTTCATCGCCGACTATGGTGTCCCACTGATGGTGCTAGTATGGACAGGAGTTTCCTACA TTCCATATGGTAGTGTTCCAAAAGGAATTCCACGGCGCCTTTTCAGCCCCAACCCATGGT CCCCTGGTGCATATGATAATTGGACAGTCATCAGGGACATGCCAAATGTGCCACTCCTCT ACATTATTGGTGCCTTCATACCAGCAACGATGATAGCCGTCCTGTACTACTTCGATCACA GTGTTGCTTCTCAGCTTGCTCAGCAGAAGGAGTTCAATTTGAGGAAGCCCCCATCTTTCC ATTATGATTTGCTTCTCCTGGGTTTCCTGACATTATTGTGTGGCCTTATTGGTATCCCTC CGGCGAATGGTGTCATTCCACAGTCTCCAATGCATACGAAGAGTTTGGCTACTCTCAAAC ATCAACTACTCCGTAACCGACTAGTAGCCACAGCCCGACAAAGCATGAGCCAGAATGCGA GCTTGAGCCAGCTGTATGGCAGCATGCAGGAAGCTTACCAGCAGATGCAGACACCACTGA TTTACCAGCAACCGTCAGTCAAGGGATTGAATGAGCTCAAGGACTCAACAGTCCAAATGG CTTCAAGCATGGGCAACATCGATGCGCCAGTTGATGAGACAGTCTTTGACATCGAGAAAG AAATCGATGACCTGCTGCCTATCGAGGTCAAGGAGCAGAGGTTGAGCAACTTGCTCCAGG CCACAATGGTTGGGGGTTGTGTTGCTGCTATGCCATTGCTCAAGAAGATCCCGACTTCTG TCCTCTGGGGCTACTTCGCCTTCATGGCCATTGAGAGCTTGCCTGGTAACCAGTTCTGGG AGAGGATCTTGCTGCTCTTCACTGCTCCCAGCAGAAGATACAAGGTGTTAGAAGAGTACC ACACCACGTTTGTCGAGACCGTGCCATTCAAGACGATAGCCATGTTCACACTCTTCCAGA CAATGTATCTACTCGTCTGCTTCGGGATCACATGGATCCCGATTGCTGGGGTTCTTTTCC CCCTCATGATCATGCTGCTGGTTCCAGTCAGGCAGTACATCCTCCCAAAGCTCTTCAAAG GTGCACATCTGACTGATCTGGATGCAGCAGAGTATGAGGAGTCACCAGCTATACCGTTCA TTGCCGCGCAAGATATTGATGTTGCATTGGCGCGCACCCAGAGTGCAGAAATCCTTGATG ACATTGTCACTAGAAGCCGTGGTGAAATCAAGCGCCTGAACAGTCCTAAGATCACCAGCT CCGGTGGCACACCAGTGGCAGAACTTAAAGGAATCCGCAGCCCTTGTATCTCTGAGAGGG CATACAGCCCTTGTATCACCGAGTTGAGGCATGACCGCAGCCCTCTAGGAGGAAGAGGCA GCCCAAGGACCGGTGAGACCCGATCGTCCAAGTTGGGCGAAGGATCAACACCAAAGTGAA GCAAGAATGATGCACTGCTCATATGAGCTATGCAACTACCTGAAATCAGCTATACTAATG ATTTCTGTATAACTATGGCGTACGGTTATATGATGTCTTATGATCAAGTATCAAGTATGA GTCTATGAGAATGTTTATGTATATCTCTAGCCTAGTATATCACCCCTTCCTCTTTTTTTG GTGTATTTCCTGATTTGGAGCACCATATGTGTAATCTCTGAACTACCAGAATATTAGAGT GACTACTTGGTAACCTTTTGAGTTTCATTTGCTAAATTCCTGTCAGAACTTGTGGATGAT TCATACTGAAAACTATTTGTATTC