Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0564600-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:23157164:23164663:-1 gene:Os12g0564600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brassinosteroid receptor kinase (BRI1)-interacting protein 117, BRI1-interacting protein 117, brassinosteroid receptor kinase-interacting protein 117 description:Zinc finger, CCHC-type domain containing protein. (Os12t0564600-01);Similar to BRI1-KD interacting protein 117 (Fragment). (Os12t0564600-02)
Sequence	ATGGTGAAGGCGCGGATGACGACGGCGGACGTGGCGGCGGAGGTCAAGTGCCTCCGCCGC CTCATCGGCATGCGCCTCTCCAACGTCTACGGCATCACCCCCAAGACATATCTTTTCAAG CTGATGAACAGCAGTGGAATCACTGAGTCAGGGGAAAGCGAGAAGGTTTTGTTGCTGATG GAAAGTGGTGTTAGGCTGCATACCACCCAATATGTCCGTGACAAGAGCACCACACCATCT GGTTTCACTCTCAAGCTACGAAAACACATTCGAAGCAAGAGACTTGAAGATGTCCGTATG CTTGGATACGATAGGATTATCCTGTTTCAGTTTGGACTTGGCAGTAACGCGCATTTTGTC ATTTTAGAACTATACGCACAAGGAAATATACTTCTTACAGATTCCGAATACACAGTGCTG ACACTACTCCGTTCACACAGAGATGATAACAAGGGATTGGCTATCATGTCGCGTCACCGC TACCCAGTAGAAGCATGCCGTGTTTTTGAAAGGACTGACTTTACAAAGTTAAAAGACACG CTGATGATGAATGCAGTTGATGATAAAGAATCTTCTCAAGTTACACCCGGTTCAATTGAT GCTCAAGAACCTTCTGTAACCCCCAGTGATGGAGTGCCGGTTACTGATAAATCTGAAGAA CCATCTACAACAACAGGAAAGAAGTCAGCTTCAAAAAACAAGCAGTCAAGTTCAAATGCA AAAGCTAGTAATAATGCTCCATCAAATAAATCAACTCTAAAGACACTTCTTGGGGAAGCA TTGGCTTATGGGCCTGCATTAGCTGAGCATATCATATTGGATGCTGGATTGCTTCCAAGT ACAAAGGTTGGGAAAGACCCAGAGAGCAGTATTGATGATCACACTATTCAGTCCCTAGTA GAATCCATTTCAAAGTTTGAGGATTGGCTTGTAGATGTCATGTCTGGTCAAAGGATCCCT GAGGGGTACATCCTCATGCAGAATAAGGCGGCTGCAAAGAAGAACCTCACACCTTTGGAG GGGTCTAGTGCTAGTCAGAAGATATATGATGAATATTGCCCTGTCCTGTTGAATCAATTT AAGTCAAGGGAATTCAATGAATTTGAGACATTTGATGCTGCTCTAGATGAGTTCTACAGC AAAATAGAGAGTCAAAGGGTGAATCAACAGCAAAAATCAAAAGAGGACTCAGCGGCACAA AGGCTTAATAAAATTAAATTGGATCAGGAAAATCGTGTACATACATTGAGAAAGGAGGTT GACCATTCCATCAAAATGGCAGAATTAATTGAGTATAATTTAGAGGATGTGGATGCTGCA ATTGTAGCTGTCCGCGTTTCCCTTGCAAATGGAATGAGTTGGGATGCCCTTGCTCGCATG ATTAAAGAAGAGAAAAAGGCTGGAAACCCAGTAGCAGGTCTAATCGATAAGCTTAGTTTT GAAAGAAATTGCATCACTCTACTTCTAAGCAATAATCTTGATGACATGGATGAGGAGGAG AAAACTGCACCTGTTGAAAAGGTAGAGGTTGACCTATCACTTTCTGCGCATGCAAATGCC AGGCGGTGGTATGAACTAAAGAAAAAACAGGAAAGCAAACAAGAGAAGACTGTCACAGCA CATGAGAAAGCATTCAAAGCAGCAGAGAAGAAGACACGTCTTCAGCTTGCTCAGGAAAAA ACTGTCGCTGCAATCACTCATATGCGCAAAGTTCACTGGTTTGAGAAGTTCAATTGGTTC ATCAGCAGTGAAAATTACCTGATTATTAGTGGCCGCGATGCTCAACAAAATGAGTTGATT GTCAAGCGGTACATGTCGAAAGGAGATCTCTACGTGCATGCTGAGTTACATGGAGCTTCC AGTACAATCATCAAGAATCACAAACCTGATAATCCCATTCCACCATTGACATTAAACCAA GCAGGATCTTTCACTGTTTGCCACAGCAAAGCATGGGATTCAAAAATTGTTACCAGTGCT TGGTGGGTGTATCCTTATCAAGTTAGCAAAACAGCTCCCACTGGCGAGTACCTAACAGTG GGTAGTTTTATGATCCGTGGCAAGAAAAATTTTCTCCCACCTCACCCCCTTGTTATGGGA TTTGGTATTCTATTCCGTTTGGATGAGAGCTCCTTGGCATCTCATCTAAATGAAAGGAGG GTCAGGGGTGAAGACGAGGAGGCCCTTCCTGATGTTGAGTCTCAGAAGCTGGAAAGTAAT GCTGAATTGGATGGTGAACTTGACAGTGATAGTGAGACTGGCAAGGAGAAACATGATGAT GAATCAAGCTTGGATAATATCAATGTTAAAAAAATTGACAATCCCATCCCTTCTAATGCA CCTTATGTTAAGGATAATGCTGATTCATCTGAGCAGCTTTCTGAAATCCGAACTGTGGTA AACAGCACTACTTCCACTTCCAAGGGACAAACAAGTGATCGCACTGTTTCATCACAACTT GAGGATCTGCTTGATAAGAATCTTGGTCTTGGGCCAACTAAGGTGTTAGGCAGAAGCTCT TTGCTCAGCAGTAATTCTGCAAGCGTGGCAGATGACATTGATGATCTTGATACGAAGAAA ACATCAGTAAGAGATAAACCATACATATCTAAAGCAGATAGAAGAAAACTGAAGAAAGGT CAGAATGTTGGTGATTCTACCAGTGACTCTCCAAATGGTGAAGCTGCCAAAAAGCCTGTT AACTCACAGCAAGAAAAAGGAAAGACAATCGAAAAGCCTGCTAATCCTAAAGTAAGTCGT GGACAGAAGGGCAAGCTTAAGAAGATTAAAGAGAAGTATGGAGAGCAGGATGAAGAAGAA AGAGAAATCCGGATGGCTTTACTTGCGTCCTCTGGAAGGGCCTCACAAAAGGATAAACCT TCAGAAGATGTAGATGGAGCCACTGCAGCTCAATCAAAACCATCGACTGGTGAAGATGAC AGATCAAAAATTTGTTATAAATGCAAAAAATCTGGACATCTTTCTCGTGATTGCCCTGAA AGTACATCTGAGGTGGATCCTGCTGATGTCAATGTTGGTAGAGCCAAAGATGGTATGGAT AGAAGCAGCGCCCCTGCTGGTAGCAGCGTTACCATGGATGAAGATGACATCCATGAGCTC GGTGATGAAGAGAAAGAGAAGTTAATTGATTTGGACTACCTAACTGGAAATCCACTGCCA AGTGATATTTTGCTATATGCTGTACCAGTTTGTGCCCCTTACAACGCATTGCAGGCATAC AAATATCGTGTGAAGATTACCCCGGGAACTGCAAAGAAAGGAAAAGCTGCCAAAACTGCA ATGAGTTTGTTCCTGCACACTGCTGACGCCACAAACCGTGAGAAGGAGCTAATGAAGGCA TGCACGGACCCTGAATTGGTTGCTGCCATTGTAGGGAATGCCAAGATCACCGCACCTGGC CTCACTCAACTGAAGCAGAAGCAGAAACAGAAGGGGAAAAAATCTGCAAAAGAAAACTAG

Peptide Sequence

PEP ID	Os12t0564600-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:23157164:23164663:-1 gene:Os12g0564600 transcript:Os12t0564600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brassinosteroid receptor kinase (BRI1)-interacting protein 117, BRI1-interacting protein 117, brassinosteroid receptor kinase-interacting protein 117 description:Zinc finger, CCHC-type domain containing protein. (Os12t0564600-01);Similar to BRI1-KD interacting protein 117 (Fragment). (Os12t0564600-02)
Sequence	MVKARMTTADVAAEVKCLRRLIGMRLSNVYGITPKTYLFKLMNSSGITESGESEKVLLLM ESGVRLHTTQYVRDKSTTPSGFTLKLRKHIRSKRLEDVRMLGYDRIILFQFGLGSNAHFV ILELYAQGNILLTDSEYTVLTLLRSHRDDNKGLAIMSRHRYPVEACRVFERTDFTKLKDT LMMNAVDDKESSQVTPGSIDAQEPSVTPSDGVPVTDKSEEPSTTTGKKSASKNKQSSSNA KASNNAPSNKSTLKTLLGEALAYGPALAEHIILDAGLLPSTKVGKDPESSIDDHTIQSLV ESISKFEDWLVDVMSGQRIPEGYILMQNKAAAKKNLTPLEGSSASQKIYDEYCPVLLNQF KSREFNEFETFDAALDEFYSKIESQRVNQQQKSKEDSAAQRLNKIKLDQENRVHTLRKEV DHSIKMAELIEYNLEDVDAAIVAVRVSLANGMSWDALARMIKEEKKAGNPVAGLIDKLSF ERNCITLLLSNNLDDMDEEEKTAPVEKVEVDLSLSAHANARRWYELKKKQESKQEKTVTA HEKAFKAAEKKTRLQLAQEKTVAAITHMRKVHWFEKFNWFISSENYLIISGRDAQQNELI VKRYMSKGDLYVHAELHGASSTIIKNHKPDNPIPPLTLNQAGSFTVCHSKAWDSKIVTSA WWVYPYQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLVMGFGILFRLDESSLASHLNERR VRGEDEEALPDVESQKLESNAELDGELDSDSETGKEKHDDESSLDNINVKKIDNPIPSNA PYVKDNADSSEQLSEIRTVVNSTTSTSKGQTSDRTVSSQLEDLLDKNLGLGPTKVLGRSS LLSSNSASVADDIDDLDTKKTSVRDKPYISKADRRKLKKGQNVGDSTSDSPNGEAAKKPV NSQQEKGKTIEKPANPKVSRGQKGKLKKIKEKYGEQDEEEREIRMALLASSGRASQKDKP SEDVDGATAAQSKPSTGEDDRSKICYKCKKSGHLSRDCPESTSEVDPADVNVGRAKDGMD RSSAPAGSSVTMDEDDIHELGDEEKEKLIDLDYLTGNPLPSDILLYAVPVCAPYNALQAY KYRVKITPGTAKKGKAAKTAMSLFLHTADATNREKELMKACTDPELVAAIVGNAKITAPG LTQLKQKQKQKGKKSAKEN

Transcript Sequence

Transcript ID	Os12t0564600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:23157164:23164663:-1 gene:Os12g0564600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brassinosteroid receptor kinase (BRI1)-interacting protein 117, BRI1-interacting protein 117, brassinosteroid receptor kinase-interacting protein 117 description:Zinc finger, CCHC-type domain containing protein. (Os12t0564600-01);Similar to BRI1-KD interacting protein 117 (Fragment). (Os12t0564600-02)
Sequence	CCTTGGATTGAAGCGGACGACACTCCCTCTCCCTCGGCGGCGGCGGCGGCGGCGGCGAGA GGCGGGCGGGGAGATGGTGAAGGCGCGGATGACGACGGCGGACGTGGCGGCGGAGGTCAA GTGCCTCCGCCGCCTCATCGGCATGCGCCTCTCCAACGTCTACGGCATCACCCCCAAGAC ATATCTTTTCAAGCTGATGAACAGCAGTGGAATCACTGAGTCAGGGGAAAGCGAGAAGGT TTTGTTGCTGATGGAAAGTGGTGTTAGGCTGCATACCACCCAATATGTCCGTGACAAGAG CACCACACCATCTGGTTTCACTCTCAAGCTACGAAAACACATTCGAAGCAAGAGACTTGA AGATGTCCGTATGCTTGGATACGATAGGATTATCCTGTTTCAGTTTGGACTTGGCAGTAA CGCGCATTTTGTCATTTTAGAACTATACGCACAAGGAAATATACTTCTTACAGATTCCGA ATACACAGTGCTGACACTACTCCGTTCACACAGAGATGATAACAAGGGATTGGCTATCAT GTCGCGTCACCGCTACCCAGTAGAAGCATGCCGTGTTTTTGAAAGGACTGACTTTACAAA GTTAAAAGACACGCTGATGATGAATGCAGTTGATGATAAAGAATCTTCTCAAGTTACACC CGGTTCAATTGATGCTCAAGAACCTTCTGTAACCCCCAGTGATGGAGTGCCGGTTACTGA TAAATCTGAAGAACCATCTACAACAACAGGAAAGAAGTCAGCTTCAAAAAACAAGCAGTC AAGTTCAAATGCAAAAGCTAGTAATAATGCTCCATCAAATAAATCAACTCTAAAGACACT TCTTGGGGAAGCATTGGCTTATGGGCCTGCATTAGCTGAGCATATCATATTGGATGCTGG ATTGCTTCCAAGTACAAAGGTTGGGAAAGACCCAGAGAGCAGTATTGATGATCACACTAT TCAGTCCCTAGTAGAATCCATTTCAAAGTTTGAGGATTGGCTTGTAGATGTCATGTCTGG TCAAAGGATCCCTGAGGGGTACATCCTCATGCAGAATAAGGCGGCTGCAAAGAAGAACCT CACACCTTTGGAGGGGTCTAGTGCTAGTCAGAAGATATATGATGAATATTGCCCTGTCCT GTTGAATCAATTTAAGTCAAGGGAATTCAATGAATTTGAGACATTTGATGCTGCTCTAGA TGAGTTCTACAGCAAAATAGAGAGTCAAAGGGTGAATCAACAGCAAAAATCAAAAGAGGA CTCAGCGGCACAAAGGCTTAATAAAATTAAATTGGATCAGGAAAATCGTGTACATACATT GAGAAAGGAGGTTGACCATTCCATCAAAATGGCAGAATTAATTGAGTATAATTTAGAGGA TGTGGATGCTGCAATTGTAGCTGTCCGCGTTTCCCTTGCAAATGGAATGAGTTGGGATGC CCTTGCTCGCATGATTAAAGAAGAGAAAAAGGCTGGAAACCCAGTAGCAGGTCTAATCGA TAAGCTTAGTTTTGAAAGAAATTGCATCACTCTACTTCTAAGCAATAATCTTGATGACAT GGATGAGGAGGAGAAAACTGCACCTGTTGAAAAGGTAGAGGTTGACCTATCACTTTCTGC GCATGCAAATGCCAGGCGGTGGTATGAACTAAAGAAAAAACAGGAAAGCAAACAAGAGAA GACTGTCACAGCACATGAGAAAGCATTCAAAGCAGCAGAGAAGAAGACACGTCTTCAGCT TGCTCAGGAAAAAACTGTCGCTGCAATCACTCATATGCGCAAAGTTCACTGGTTTGAGAA GTTCAATTGGTTCATCAGCAGTGAAAATTACCTGATTATTAGTGGCCGCGATGCTCAACA AAATGAGTTGATTGTCAAGCGGTACATGTCGAAAGGAGATCTCTACGTGCATGCTGAGTT ACATGGAGCTTCCAGTACAATCATCAAGAATCACAAACCTGATAATCCCATTCCACCATT GACATTAAACCAAGCAGGATCTTTCACTGTTTGCCACAGCAAAGCATGGGATTCAAAAAT TGTTACCAGTGCTTGGTGGGTGTATCCTTATCAAGTTAGCAAAACAGCTCCCACTGGCGA GTACCTAACAGTGGGTAGTTTTATGATCCGTGGCAAGAAAAATTTTCTCCCACCTCACCC CCTTGTTATGGGATTTGGTATTCTATTCCGTTTGGATGAGAGCTCCTTGGCATCTCATCT AAATGAAAGGAGGGTCAGGGGTGAAGACGAGGAGGCCCTTCCTGATGTTGAGTCTCAGAA GCTGGAAAGTAATGCTGAATTGGATGGTGAACTTGACAGTGATAGTGAGACTGGCAAGGA GAAACATGATGATGAATCAAGCTTGGATAATATCAATGTTAAAAAAATTGACAATCCCAT CCCTTCTAATGCACCTTATGTTAAGGATAATGCTGATTCATCTGAGCAGCTTTCTGAAAT CCGAACTGTGGTAAACAGCACTACTTCCACTTCCAAGGGACAAACAAGTGATCGCACTGT TTCATCACAACTTGAGGATCTGCTTGATAAGAATCTTGGTCTTGGGCCAACTAAGGTGTT AGGCAGAAGCTCTTTGCTCAGCAGTAATTCTGCAAGCGTGGCAGATGACATTGATGATCT TGATACGAAGAAAACATCAGTAAGAGATAAACCATACATATCTAAAGCAGATAGAAGAAA ACTGAAGAAAGGTCAGAATGTTGGTGATTCTACCAGTGACTCTCCAAATGGTGAAGCTGC CAAAAAGCCTGTTAACTCACAGCAAGAAAAAGGAAAGACAATCGAAAAGCCTGCTAATCC TAAAGTAAGTCGTGGACAGAAGGGCAAGCTTAAGAAGATTAAAGAGAAGTATGGAGAGCA GGATGAAGAAGAAAGAGAAATCCGGATGGCTTTACTTGCGTCCTCTGGAAGGGCCTCACA AAAGGATAAACCTTCAGAAGATGTAGATGGAGCCACTGCAGCTCAATCAAAACCATCGAC TGGTGAAGATGACAGATCAAAAATTTGTTATAAATGCAAAAAATCTGGACATCTTTCTCG TGATTGCCCTGAAAGTACATCTGAGGTGGATCCTGCTGATGTCAATGTTGGTAGAGCCAA AGATGGTATGGATAGAAGCAGCGCCCCTGCTGGTAGCAGCGTTACCATGGATGAAGATGA CATCCATGAGCTCGGTGATGAAGAGAAAGAGAAGTTAATTGATTTGGACTACCTAACTGG AAATCCACTGCCAAGTGATATTTTGCTATATGCTGTACCAGTTTGTGCCCCTTACAACGC ATTGCAGGCATACAAATATCGTGTGAAGATTACCCCGGGAACTGCAAAGAAAGGAAAAGC TGCCAAAACTGCAATGAGTTTGTTCCTGCACACTGCTGACGCCACAAACCGTGAGAAGGA GCTAATGAAGGCATGCACGGACCCTGAATTGGTTGCTGCCATTGTAGGGAATGCCAAGAT CACCGCACCTGGCCTCACTCAACTGAAGCAGAAGCAGAAACAGAAGGGGAAAAAATCTGC AAAAGAAAACTAGTTCAAAGCTATCAGAGACCACCCCGTTTTGTCAAGAAAAGTATTTTT CTCTGCAGAAACAATGCAAATGTTTTGGTATGTTGTCAGGCGCATTTGGATGGAGGTGTC ACATGGATTGGCCCTCATTCTTGTAAAGTTTAAACATCTCTTTGGCATTCATAGCCATAG GACAGGATATAATGTAAACAGATACGGCAGAACATTGGAACCGATTGACAAGCTTCATAC GCTTACAAAGGGACGCTGAGTCCCCTTTTGGTGTGTCTTGTGATGTATGAAAGCTACAAA AAAAAAATCATAGATTTCACTTTAGC