Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0562400-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:23048705:23053244:1 gene:Os12g0562400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE C3 description:Similar to Phospholipase C (Fragment). (Os12t0562400-00)
Sequence	ATGGGGAGCTACGCGTACAAGTACTGCATGTGCTTCACCCGCAAGTTCCGCTCGCCGGCG GCCGACCCGCCGCCGGACGTCCGCGCCGCCTTCCTCGCCGCCGGCGGAGGCGACGGCGGG CTCCGGCGGTTCCTCGCGCAGGCGCAGGGGGAGACGCCGGCGGAGGTGGACCGCATCCTC GCGCTGCTCAGCGGCGGTGGCGGCGGCGGCGGAGGAGGAGGCATCGCGGCCCGCCTCGTG GGCCCCCGGCCCGGCCCGGCCCCCTCGCTCGACGACTTCTTTGGGTTCCTCTTCAACGCC GATCTCAACCCACCCATCGCCACCCAGGTTCACCAGGACATGTCGGCGCCGTTTTCGCAC TATTACATATACACCGGGCACAATTCCTACTTGACTGGGAACCAGCTGAACAGTGATTCC AGCGACATTCCGATTATCAAAGCATTGCAGAGGGGTGTCAGGGTGATTGAGCTCGATATG TGGCCGAATTCCGCTAAGAACAACATTGACATTCTTCATGGAGGGACATTGACTGCACCT GTACAAATCATCAAATGTTTGAAGTCCATTAAAGAATACGCCTTTTGTGCTTCACCATAT CCTCTTGTCATTACTCTTGAGGATCACCTCACACCGGACCTCCAAGCTAAAGTAGCTGAG ATGCTCGTCAAAACATTTGGAAATCTCCTTTACATTCCTAGTTCAGACCCAATAAATGAG TTTCCTTCTCCAGAATCTCTAATGAAGAAAATAATCATCTCAACTAAACCACCAGAAGAA TACAAGAAGTTTCTTAAATCTAAGGATAATCAGAACATCAATGGCGGCTTAGCTAATCTG GCAGAGGAAGGAAGCTTGAGAAGAATAGATTCAAATGCTGAAGAATCGGATGGAAAGGAT GAACTGGATGATCAAGATGAGGACTCCTCTGATGAGGATGATCCCAAATTTCAGCAGGAA ACAGCCTGTGAGTATAGGGAACTGATCACCATCCACGCTGGCAAACCAAAAGGCCATTTG AAGGATGCGCTTAAGGTGGATCCTGACAAAGTCAGGCGCCTTTCTTTGAGCGAAACACAG CTAGCTAAAGCAACAGCTTCTCATGGTGCCGATGTTATAAGGTTCACCCAGAAGAATATA CTCAGGGTGTATCCGAAGGGTACAAGGATTAATTCTTCCAACTATGATCCAATGAATGCC TGGACTCATGGTGCTCAGATGGTTGCATTTAACATGCAGGGGCATGACAAAGCACTCCGG TTAATGCAAGGATTTTTTAGAGCTAATGGAGGTTGTGGCTATGTCAAAAAGCCTGACTTC TTGCTTAGGACAGGTCCAAATGGTGAAGTATTTGACCCTAACGCAAGTATGCCTGTGAAG AAAACTCTGAAGGTGAAAGTATATATGGGAGATGGATGGCGAATGGATTTCAGTAAAACT CATTTCGACACCTTCTCTCCTCCTGATTTCTATACTAGGGTGGGGATCGCTGGTGTGCGG GCAGATTGTGTGATGAAGAAGACTCGAACAATCGAGGATCAGTGGGTACCGATGTGGGAT GAGGAGTTCACATTCCCTCTGACAGTCCCGGAGCTGGCTGTGCTGAGAATCGAGGTTCAT GAGTACGACATGTCGGAGAAGCATGACTTTGGGGGGCAGACATGCCTGCCAGTGTCGGAG CTGAAGCAGGGCATCCGCGCTGTGCCTCTCCACGATCGCCGGGGCACCAGGTACAAGTCT GTCAGGCTCCTCATGCGCTTCGACTTCCTCTAG

Peptide Sequence

PEP ID	Os12t0562400-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:23048705:23053244:1 gene:Os12g0562400 transcript:Os12t0562400-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE C3 description:Similar to Phospholipase C (Fragment). (Os12t0562400-00)
Sequence	MGSYAYKYCMCFTRKFRSPAADPPPDVRAAFLAAGGGDGGLRRFLAQAQGETPAEVDRIL ALLSGGGGGGGGGGIAARLVGPRPGPAPSLDDFFGFLFNADLNPPIATQVHQDMSAPFSH YYIYTGHNSYLTGNQLNSDSSDIPIIKALQRGVRVIELDMWPNSAKNNIDILHGGTLTAP VQIIKCLKSIKEYAFCASPYPLVITLEDHLTPDLQAKVAEMLVKTFGNLLYIPSSDPINE FPSPESLMKKIIISTKPPEEYKKFLKSKDNQNINGGLANLAEEGSLRRIDSNAEESDGKD ELDDQDEDSSDEDDPKFQQETACEYRELITIHAGKPKGHLKDALKVDPDKVRRLSLSETQ LAKATASHGADVIRFTQKNILRVYPKGTRINSSNYDPMNAWTHGAQMVAFNMQGHDKALR LMQGFFRANGGCGYVKKPDFLLRTGPNGEVFDPNASMPVKKTLKVKVYMGDGWRMDFSKT HFDTFSPPDFYTRVGIAGVRADCVMKKTRTIEDQWVPMWDEEFTFPLTVPELAVLRIEVH EYDMSEKHDFGGQTCLPVSELKQGIRAVPLHDRRGTRYKSVRLLMRFDFL

Transcript Sequence

Transcript ID	Os12t0562400-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:23048705:23053244:1 gene:Os12g0562400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE C3 description:Similar to Phospholipase C (Fragment). (Os12t0562400-00)
Sequence	GAGTCCTCGTCGTCTTCCTCCTCCTCCGCATCGCATCGCATCGCATCCCACCCCCCACGC GGAGAGAACATCGCCAGCAACGCGCGCTTCTCCCCCTCCCCTTCTCCCCATCCCATCCAA TCCATCCATGGCGGAATGCTCCATTGATCACGACCAGTAGCTTCCTACAACCCCAGATCG GGAGGAGGAAGAAGAAGAAGCAAGAAGCAAGAAGAAGGAGACGCCGTCAATGGGGAGCTA CGCGTACAAGTACTGCATGTGCTTCACCCGCAAGTTCCGCTCGCCGGCGGCCGACCCGCC GCCGGACGTCCGCGCCGCCTTCCTCGCCGCCGGCGGAGGCGACGGCGGGCTCCGGCGGTT CCTCGCGCAGGCGCAGGGGGAGACGCCGGCGGAGGTGGACCGCATCCTCGCGCTGCTCAG CGGCGGTGGCGGCGGCGGCGGAGGAGGAGGCATCGCGGCCCGCCTCGTGGGCCCCCGGCC CGGCCCGGCCCCCTCGCTCGACGACTTCTTTGGGTTCCTCTTCAACGCCGATCTCAACCC ACCCATCGCCACCCAGGTTCACCAGGACATGTCGGCGCCGTTTTCGCACTATTACATATA CACCGGGCACAATTCCTACTTGACTGGGAACCAGCTGAACAGTGATTCCAGCGACATTCC GATTATCAAAGCATTGCAGAGGGGTGTCAGGGTGATTGAGCTCGATATGTGGCCGAATTC CGCTAAGAACAACATTGACATTCTTCATGGAGGGACATTGACTGCACCTGTACAAATCAT CAAATGTTTGAAGTCCATTAAAGAATACGCCTTTTGTGCTTCACCATATCCTCTTGTCAT TACTCTTGAGGATCACCTCACACCGGACCTCCAAGCTAAAGTAGCTGAGATGCTCGTCAA AACATTTGGAAATCTCCTTTACATTCCTAGTTCAGACCCAATAAATGAGTTTCCTTCTCC AGAATCTCTAATGAAGAAAATAATCATCTCAACTAAACCACCAGAAGAATACAAGAAGTT TCTTAAATCTAAGGATAATCAGAACATCAATGGCGGCTTAGCTAATCTGGCAGAGGAAGG AAGCTTGAGAAGAATAGATTCAAATGCTGAAGAATCGGATGGAAAGGATGAACTGGATGA TCAAGATGAGGACTCCTCTGATGAGGATGATCCCAAATTTCAGCAGGAAACAGCCTGTGA GTATAGGGAACTGATCACCATCCACGCTGGCAAACCAAAAGGCCATTTGAAGGATGCGCT TAAGGTGGATCCTGACAAAGTCAGGCGCCTTTCTTTGAGCGAAACACAGCTAGCTAAAGC AACAGCTTCTCATGGTGCCGATGTTATAAGGTTCACCCAGAAGAATATACTCAGGGTGTA TCCGAAGGGTACAAGGATTAATTCTTCCAACTATGATCCAATGAATGCCTGGACTCATGG TGCTCAGATGGTTGCATTTAACATGCAGGGGCATGACAAAGCACTCCGGTTAATGCAAGG ATTTTTTAGAGCTAATGGAGGTTGTGGCTATGTCAAAAAGCCTGACTTCTTGCTTAGGAC AGGTCCAAATGGTGAAGTATTTGACCCTAACGCAAGTATGCCTGTGAAGAAAACTCTGAA GGTGAAAGTATATATGGGAGATGGATGGCGAATGGATTTCAGTAAAACTCATTTCGACAC CTTCTCTCCTCCTGATTTCTATACTAGGGTGGGGATCGCTGGTGTGCGGGCAGATTGTGT GATGAAGAAGACTCGAACAATCGAGGATCAGTGGGTACCGATGTGGGATGAGGAGTTCAC ATTCCCTCTGACAGTCCCGGAGCTGGCTGTGCTGAGAATCGAGGTTCATGAGTACGACAT GTCGGAGAAGCATGACTTTGGGGGGCAGACATGCCTGCCAGTGTCGGAGCTGAAGCAGGG CATCCGCGCTGTGCCTCTCCACGATCGCCGGGGCACCAGGTACAAGTCTGTCAGGCTCCT CATGCGCTTCGACTTCCTCTAGCTAGCTTTCTACCTAGCTAGTGCTGCTGCCAAAACCAG AATACCAGATGATGTATCTTACTAGTTTTCTAGGCTTCTTCAGCTGGTGCATATATGTAC TATGGATGTAGATGTACTATTTTTGTAATCACACATGCATCTTGCATGTCTTGATAATGA TAATAATGCTAGC