Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0562100-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:23031399:23035443:-1 gene:Os12g0562100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Major facilitator superfamily, general substrate transporter domain containing protein. (Os12t0562100-01);Similar to ferroportin protein family. (Os12t0562100-02)
Sequence	ATGGGGATGGTCACCGCCACCGCCGCCGCCGCCCTCCTCGCCTCGCCGCCGCAGGGTCAT CTTGGAAGGCGGTGTCACCTCGTGGTGCCCGGGCTACGGCTGAGGCCGCCGGCCAGCTCA TCTCCTCCCCACGCCGCCCCGCCGCTCAGGTTAAGCAATTTTGTCCCAAGGTGTTACATC ACAAATGTTGAGGTTGATGTTAGTCATACGAGTGAACAAGAGGCTCTAGATGATCACCCA CCATTGTTGCCAGCCTGCGCCATTCCAGTTGTACACCTACGAGATGTTCCGGATGCTAGT CCTTTTCCCCTGCATGAGAGTGCTTCCCATTCTACTGATTTTGAAGAGCTACCCGTCTTG TCTGAGGGTGAGCTACATACTATAGCGGCCACCCCTGCCCACCCTGCTGGATTATATGCT CTATACGCTAGCTACTTATTTGGTAACTTGGTGGAACAACTTTGGAATTTTGCTTGGCCT GCTGCACTGGCAATTCTCCATCCAAGCCTATTGCCTGTGGCTATTGTCGGTTTCTTCACA AAGCTTTCAGTCTTTATTGGGGCACCAATAGTAGGGAAACTTATGGATCATTTCCCTCGA ATACCTATGTACACAGGGTTGAATGCTGTCCAGGTAGCCACTCAGTTGATATCAGCTGCA ATGGTCATCTATGCTATGAAGAATGTGACCCATGCATCTACGTCCGCCGTAGTTCTCAAA CCTTGGTTTATCGCACTAGTGGCAGCTGGAGCTATTGAAAGGCTTGCAGGATTGGCACTA GGAGTTGCTATGGAGCGGGACTGGGTTGTGTTGTTAGCAGGAACTAACAGGCCAGTTGCA TTAGCTCAAGCTAACGCTGTGCTTAATCGACTTGATCTTGTTTGTGAGACTGTTGGTGCT TCAGTTTTTGGCCTTCTGCTGTCCAAATATCATCCAGTAACCTGTTTGAAGATTGCTTGT GGTCTAATGATATGCAGTTTCCCTGTCCTGGTTGTGTTGGGTCAACTGATTAACAGATTC TCCTGCCATGCTCTTGATTCCTCTAGAACCCCGAGTGAAGAATCTATCTGTGCCAATCTA TTGGATGTTCGTAAGATTGTTCAAAATGGCTTGAGTGCTATCAGAAATGGCTGGAATGAG TATAAGCAGCAAACAGTTCTACCTGCAAGTGTAGCTACCGTGTTTCTAAATTTCAATGTA GCACTTGCTCCTGGTGCTATAATGACTGCGCTATTGATGCATCGTGGTATTAGTCCGTCG ATTGTTGGTGCTTTTAGTGGATTGTGTTCTATCATGGGCCTTGTTGCGACATTCATCTCC TCAAGCTTGGTGGAAAGAGTTGGAATTCTAAAGGCAGGAGCAGCTGGATTGATAGTTCAA GCTTCACTCTTGTCGGTCGCTCTCGTAGTGTATTGGACTGGTTCTATTTCACAGAGGACA CCTCTACTTATCTTCCTGGCTGCTATCGCATTATCTCGGTTGGGGCACATGTCATATGAT GTTGTGGGTACACAGATTCTCCAAACAGGTGTTCCTGCATCAAAAGCAAATCTTATTGGT GGAATGGAGGTCTCAATATCAAGCCTTGCAGAACTAGTCATGCTTGGTATGGCCATCATC GCAAACGACGTTTCTCATTTCGGTTTCTTGGCAATCCTATCCGTGTCATCGGTTGCTGGT GCGGCATGGATGTTCTGCCAGTGGTTGGGAAATCCTACAGATGAGCAGAGGGAACTGTTC ATGTTTGATCCCCATTTCCAAGTTGAACCAATGTAA

Peptide Sequence

PEP ID	Os12t0562100-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:23031399:23035443:-1 gene:Os12g0562100 transcript:Os12t0562100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Major facilitator superfamily, general substrate transporter domain containing protein. (Os12t0562100-01);Similar to ferroportin protein family. (Os12t0562100-02)
Sequence	MGMVTATAAAALLASPPQGHLGRRCHLVVPGLRLRPPASSSPPHAAPPLRLSNFVPRCYI TNVEVDVSHTSEQEALDDHPPLLPACAIPVVHLRDVPDASPFPLHESASHSTDFEELPVL SEGELHTIAATPAHPAGLYALYASYLFGNLVEQLWNFAWPAALAILHPSLLPVAIVGFFT KLSVFIGAPIVGKLMDHFPRIPMYTGLNAVQVATQLISAAMVIYAMKNVTHASTSAVVLK PWFIALVAAGAIERLAGLALGVAMERDWVVLLAGTNRPVALAQANAVLNRLDLVCETVGA SVFGLLLSKYHPVTCLKIACGLMICSFPVLVVLGQLINRFSCHALDSSRTPSEESICANL LDVRKIVQNGLSAIRNGWNEYKQQTVLPASVATVFLNFNVALAPGAIMTALLMHRGISPS IVGAFSGLCSIMGLVATFISSSLVERVGILKAGAAGLIVQASLLSVALVVYWTGSISQRT PLLIFLAAIALSRLGHMSYDVVGTQILQTGVPASKANLIGGMEVSISSLAELVMLGMAII ANDVSHFGFLAILSVSSVAGAAWMFCQWLGNPTDEQRELFMFDPHFQVEPM

Transcript Sequence

Transcript ID	Os12t0562100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:23031399:23035443:-1 gene:Os12g0562100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Major facilitator superfamily, general substrate transporter domain containing protein. (Os12t0562100-01);Similar to ferroportin protein family. (Os12t0562100-02)
Sequence	GCGGATTCCAGAAGGTTCTGGAAGCTTCTGGGGCACCCCACGCACAGCCGCCGGCGCCCG GCCCGGTGCCGGAAGAGGCTGCATGCATGAGTAGTCGCGCCGCCGCCGTAGAGGAGCAGC ATGGGGATGGTCACCGCCACCGCCGCCGCCGCCCTCCTCGCCTCGCCGCCGCAGGGTCAT CTTGGAAGGCGGTGTCACCTCGTGGTGCCCGGGCTACGGCTGAGGCCGCCGGCCAGCTCA TCTCCTCCCCACGCCGCCCCGCCGCTCAGGTTAAGCAATTTTGTCCCAAGGTGTTACATC ACAAATGTTGAGGTTGATGTTAGTCATACGAGTGAACAAGAGGCTCTAGATGATCACCCA CCATTGTTGCCAGCCTGCGCCATTCCAGTTGTACACCTACGAGATGTTCCGGATGCTAGT CCTTTTCCCCTGCATGAGAGTGCTTCCCATTCTACTGATTTTGAAGAGCTACCCGTCTTG TCTGAGGGTGAGCTACATACTATAGCGGCCACCCCTGCCCACCCTGCTGGATTATATGCT CTATACGCTAGCTACTTATTTGGTAACTTGGTGGAACAACTTTGGAATTTTGCTTGGCCT GCTGCACTGGCAATTCTCCATCCAAGCCTATTGCCTGTGGCTATTGTCGGTTTCTTCACA AAGCTTTCAGTCTTTATTGGGGCACCAATAGTAGGGAAACTTATGGATCATTTCCCTCGA ATACCTATGTACACAGGGTTGAATGCTGTCCAGGTAGCCACTCAGTTGATATCAGCTGCA ATGGTCATCTATGCTATGAAGAATGTGACCCATGCATCTACGTCCGCCGTAGTTCTCAAA CCTTGGTTTATCGCACTAGTGGCAGCTGGAGCTATTGAAAGGCTTGCAGGATTGGCACTA GGAGTTGCTATGGAGCGGGACTGGGTTGTGTTGTTAGCAGGAACTAACAGGCCAGTTGCA TTAGCTCAAGCTAACGCTGTGCTTAATCGACTTGATCTTGTTTGTGAGACTGTTGGTGCT TCAGTTTTTGGCCTTCTGCTGTCCAAATATCATCCAGTAACCTGTTTGAAGATTGCTTGT GGTCTAATGATATGCAGTTTCCCTGTCCTGGTTGTGTTGGGTCAACTGATTAACAGATTC TCCTGCCATGCTCTTGATTCCTCTAGAACCCCGAGTGAAGAATCTATCTGTGCCAATCTA TTGGATGTTCGTAAGATTGTTCAAAATGGCTTGAGTGCTATCAGAAATGGCTGGAATGAG TATAAGCAGCAAACAGTTCTACCTGCAAGTGTAGCTACCGTGTTTCTAAATTTCAATGTA GCACTTGCTCCTGGTGCTATAATGACTGCGCTATTGATGCATCGTGGTATTAGTCCGTCG ATTGTTGGTGCTTTTAGTGGATTGTGTTCTATCATGGGCCTTGTTGCGACATTCATCTCC TCAAGCTTGGTGGAAAGAGTTGGAATTCTAAAGGCAGGAGCAGCTGGATTGATAGTTCAA GCTTCACTCTTGTCGGTCGCTCTCGTAGTGTATTGGACTGGTTCTATTTCACAGAGGACA CCTCTACTTATCTTCCTGGCTGCTATCGCATTATCTCGGTTGGGGCACATGTCATATGAT GTTGTGGGTACACAGATTCTCCAAACAGGTGTTCCTGCATCAAAAGCAAATCTTATTGGT GGAATGGAGGTCTCAATATCAAGCCTTGCAGAACTAGTCATGCTTGGTATGGCCATCATC GCAAACGACGTTTCTCATTTCGGTTTCTTGGCAATCCTATCCGTGTCATCGGTTGCTGGT GCGGCATGGATGTTCTGCCAGTGGTTGGGAAATCCTACAGATGAGCAGAGGGAACTGTTC ATGTTTGATCCCCATTTCCAAGTTGAACCAATGTAAGTAAAAAAAAAAACACCATTCATG CCATCACCTTGTTAAGAAAGATACTAGAGTTCAGAGTATTTGACTTCCATACTGGACGTA GCAAGAACTTTGTGCCACTTCTTTTTCCCAATTTACCATATGATCTTGAATATTGAAATT ACAAATATCAAACGTTACATCGCC