Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0561200-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:22973869:22976141:-1 gene:Os12g0561200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PAPA-1-like conserved region family protein, expressed. (Os12t0561200-01);Zinc finger, HIT-type domain containing protein. (Os12t0561200-02)
Sequence	ATGAGAGAGAGGGGCGAAATGGAAGGCCGTGAGGGCTCTAGGTTGGACAATTCGCTCACG AGGAAGCGCCGGAGCAGCAGCACGGCGAGGCGGCGGCCGAGGCCGGAGAGCAATCATGTC GTGGATGTGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGAGACGGCTACTCCTCG TCTTCTTCGTCGGCGATTGGCTCGGATGAGGATGCCAACTCCGATGGGGAGGAGCACCAG AGGCGAGAGATCCATCTGAATGCCCCTTCCCCGGATCGTGCCGCGAGGCGTGCGGCGATG GAGGGCGGCGCTATGTCCTCCAATCCTAACCCGAGAAGCTCGCACAAGACCAAGGGGAGC AACCAGCTGCATTCCGAGGGCTCGGGTGGTGGTGGTGGTGGTAGCTCCAGGAAGGGCGAG AGCGGCCATGGTGCGGTTGTTTCGGCAGGGAATCGTGAGTCGTCGACCGGTGATAAAACA AGGAAGTTGAAGCTCAAGATCGGCGGAATCCGCCGTAGCGTGCCGGCGAAACCAAGCCCT GATATGTCGCATTCCAGGTCTTTGCCTGTGAAGCCTCCGCGGCCAGGAGATTCGCAGCAA CGGCAAAAGCATTCTAGTCAGGCTGAAGGAGTAAAAGATTCCAGTAGGTTGGCATCTTCC CGAGACAAGAAAACCAAAAAGGAGAAGTCAATTGATGACGCGCTAACTCCAGAACAACCA GCCAAAGTTCACAGGGAACCATCTTCAGATCCTGTCCGGAAGAGTAGGAGGATTGCTAAG AAATCCATCTTGGACAGTGAATTAGATGAGGACTATGATACAAATATTCTTGATGATTTT GGAACTTCTGAAGGTGTGGAAGTCCATACTCGTGAGCCTGCAAAAAAAACAGGAAGTAGC TCTAAGAAGAATGCTGCAAAGAAAGCTAAAACTAAGAGCACATCATACGAGATCGATAAT GATTTTGTTACCTCCAGATCAAAAAGGGATGGCAATAAAAGGTCTAGGGAATCTACTGAT GCTGATAATAGTGAAGAGGAACCTACATCTGACAGTGAGCTTGATGCACAAAACAGGAAG CAGAAAGCAGTCACTGAATCACCTGCTAATGTAAGAAGCGAGCCTCTGACAACACGTCGC CGTGCCCTTCAATCATGGATGGATGGAAACAGCAACAGTGCTATTGAGTTCCCTGATGGT TTGCCACCAGCTCCTTCAAGAGGCAAGAAGGATAAGCTTTCTGATGCGGAAATGCTTGCC AAGAAGGCAGAGGCTGCTCAGCGGCGCAAGATGCAAGTCGAGAAGGCTACTAAAGAAAGC GAGGCTGAAGCTATAAGGAAAATTTTGGGCCTGGATTCTGAGAAGAAG

Peptide Sequence

PEP ID	Os12t0561200-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:22973869:22976141:-1 gene:Os12g0561200 transcript:Os12t0561200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PAPA-1-like conserved region family protein, expressed. (Os12t0561200-01);Zinc finger, HIT-type domain containing protein. (Os12t0561200-02)
Sequence	MRERGEMEGREGSRLDNSLTRKRRSSSTARRRPRPESNHVVDVEQQQQQQQQQQRDGYSS SSSSAIGSDEDANSDGEEHQRREIHLNAPSPDRAARRAAMEGGAMSSNPNPRSSHKTKGS NQLHSEGSGGGGGGSSRKGESGHGAVVSAGNRESSTGDKTRKLKLKIGGIRRSVPAKPSP DMSHSRSLPVKPPRPGDSQQRQKHSSQAEGVKDSSRLASSRDKKTKKEKSIDDALTPEQP AKVHREPSSDPVRKSRRIAKKSILDSELDEDYDTNILDDFGTSEGVEVHTREPAKKTGSS SKKNAAKKAKTKSTSYEIDNDFVTSRSKRDGNKRSRESTDADNSEEEPTSDSELDAQNRK QKAVTESPANVRSEPLTTRRRALQSWMDGNSNSAIEFPDGLPPAPSRGKKDKLSDAEMLA KKAEAAQRRKMQVEKATKESEAEAIRKILGLDSEKK

Transcript Sequence

Transcript ID	Os12t0561200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:22973869:22976141:-1 gene:Os12g0561200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PAPA-1-like conserved region family protein, expressed. (Os12t0561200-01);Zinc finger, HIT-type domain containing protein. (Os12t0561200-02)
Sequence	GTGTTCCTCGTCGTCGGCGACGAGGACAACTGCGGCGGCGGCGGCGGCGGCGGCGGCGAT GGCCGTGTAATTCCTTCTAGGGCCGTCTCAAATCGTCCCTCGGACCTACTCGATTTTCGT GGCTTTCGCGACCAGCCTCTCGTGTCGTGGTGATGAGAGAGAGGGGCGAAATGGAAGGCC GTGAGGGCTCTAGGTTGGACAATTCGCTCACGAGGAAGCGCCGGAGCAGCAGCACGGCGA GGCGGCGGCCGAGGCCGGAGAGCAATCATGTCGTGGATGTGGAGCAGCAGCAGCAGCAGC AGCAGCAGCAGCAGCGAGACGGCTACTCCTCGTCTTCTTCGTCGGCGATTGGCTCGGATG AGGATGCCAACTCCGATGGGGAGGAGCACCAGAGGCGAGAGATCCATCTGAATGCCCCTT CCCCGGATCGTGCCGCGAGGCGTGCGGCGATGGAGGGCGGCGCTATGTCCTCCAATCCTA ACCCGAGAAGCTCGCACAAGACCAAGGGGAGCAACCAGCTGCATTCCGAGGGCTCGGGTG GTGGTGGTGGTGGTAGCTCCAGGAAGGGCGAGAGCGGCCATGGTGCGGTTGTTTCGGCAG GGAATCGTGAGTCGTCGACCGGTGATAAAACAAGGAAGTTGAAGCTCAAGATCGGCGGAA TCCGCCGTAGCGTGCCGGCGAAACCAAGCCCTGATATGTCGCATTCCAGGTCTTTGCCTG TGAAGCCTCCGCGGCCAGGAGATTCGCAGCAACGGCAAAAGCATTCTAGTCAGGCTGAAG GAGTAAAAGATTCCAGTAGGTTGGCATCTTCCCGAGACAAGAAAACCAAAAAGGAGAAGT CAATTGATGACGCGCTAACTCCAGAACAACCAGCCAAAGTTCACAGGGAACCATCTTCAG ATCCTGTCCGGAAGAGTAGGAGGATTGCTAAGAAATCCATCTTGGACAGTGAATTAGATG AGGACTATGATACAAATATTCTTGATGATTTTGGAACTTCTGAAGGTGTGGAAGTCCATA CTCGTGAGCCTGCAAAAAAAACAGGAAGTAGCTCTAAGAAGAATGCTGCAAAGAAAGCTA AAACTAAGAGCACATCATACGAGATCGATAATGATTTTGTTACCTCCAGATCAAAAAGGG ATGGCAATAAAAGGTCTAGGGAATCTACTGATGCTGATAATAGTGAAGAGGAACCTACAT CTGACAGTGAGCTTGATGCACAAAACAGGAAGCAGAAAGCAGTCACTGAATCACCTGCTA ATGTAAGAAGCGAGCCTCTGACAACACGTCGCCGTGCCCTTCAATCATGGATGGATGGAA ACAGCAACAGTGCTATTGAGTTCCCTGATGGTTTGCCACCAGCTCCTTCAAGAGGCAAGA AGGATAAGCTTTCTGATGCGGAAATGCTTGCCAAGAAGGCAGAGGCTGCTCAGCGGCGCA AGATGCAAGTCGAGAAGGCTACTAAAGAAAGCGAGGCTGAAGCTATAAGGAAAATTTTGG GCCTGGATTCTGAGAAGAAG