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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0560400-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:22947030:22948075:1 gene:Os12g0560400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-directed RNA polymerase II 14.5 kDa polypeptide (EC 2.7.7.6) (RPB9) (RPB14.5). (Os12t0560400-01)
Sequence

AACAACATACTGTATCCCAAGGAGGATAGGGACCAGAAGATTCTGCTCTATGCCTGCAGG
AACTGTGACCACCAGGAGGTTGCAGACAACAACTGCGTCTACCGGAATGTGGTGCACCAC
AGCGCCGGAGAGTTCACCCAAGTGCTCCAGGATGTCGCCGGCGATCCGACTCTCCCTCGC
ACCAAGGCGGTCCGGTGCGCGGTCTGTGGCCACGGCGAGGCCGTGTTCTTCCAGGCCACT
GCCAGAGGGGAGGAAGGGATGACCCTGTTCTTCGTCTGCTGCAACCCGAGCTGCGGTCAC
AGATGGAGAGAATGA

Peptide Sequence

PEP ID

Os12t0560400-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:22947030:22948075:1 gene:Os12g0560400 transcript:Os12t0560400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-directed RNA polymerase II 14.5 kDa polypeptide (EC 2.7.7.6) (RPB9) (RPB14.5). (Os12t0560400-01)
Sequence

NNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGDPTLPR
TKAVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE

Transcript Sequence

Transcript ID

Os12t0560400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:22947030:22948075:1 gene:Os12g0560400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-directed RNA polymerase II 14.5 kDa polypeptide (EC 2.7.7.6) (RPB9) (RPB14.5). (Os12t0560400-01)
Sequence

GCAACAACATACTGTATCCCAAGGAGGATAGGGACCAGAAGATTCTGCTCTATGCCTGCA
GGAACTGTGACCACCAGGAGGTTGCAGACAACAACTGCGTCTACCGGAATGTGGTGCACC
ACAGCGCCGGAGAGTTCACCCAAGTGCTCCAGGATGTCGCCGGCGATCCGACTCTCCCTC
GCACCAAGGCGGTCCGGTGCGCGGTCTGTGGCCACGGCGAGGCCGTGTTCTTCCAGGCCA
CTGCCAGAGGGGAGGAAGGGATGACCCTGTTCTTCGTCTGCTGCAACCCGAGCTGCGGTC
ACAGATGGAGAGAATGAGATCAATTTGTAGTCAACCAAGTGAAGAAAGTCATTGATGCAA
ATGATCAGAGAGACATATGATTTTGATTTCATCCAAGAGACATTCCATAGAAGCATAGAC
TGATTGTATGTTTAAATTTTTAAAAACACATTCAGGCATCGGTATTTTGTGTAACTTCTG
AAGGAAAAGGATCAAGACTACTAGGATAAAACATTCTGTGGTCTATTCCTTCCTTATAAA
CAAAGGATGGGATGAGGACAGTTTTCTTGGTGATTCAATTCTGC