Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0557400-02
CDS Infomation

cds chromosome:IRGSP-1.0:12:22710855:22713327:-1 gene:Os12g0557400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0557400-01);Conserved hypothetical protein. (Os12t0557400-02)
Sequence

ATGGGGTGGGCGACGCGGTTCCTGGCGGCGGTCTGCTTCTTCGCGGCGGGCGTCGTCTTC
GCCCCCGACGTCCTCCTCGGCGCCCGCTCCGGCTCCGGCTCCGGCGGCGGCGCCGCCGCG
GCCGCCAAGGTGGCCCACCTCCTCTGCTTCGCCACCTCATGGGGCGCCGCCCTCTGGGCC
ACCTTCATCGGCGGCATCATCATGTTCAAGAATCTGCCGAGGCACCAGTTCGGGAACCTG
CAGGGGAAGTTGTTCCCGGCCTACTTCATGCTCATCTCCGCCTGCGCCGCCGTCTCCGTC
GCCGCCTTCGCCTACCTCCACCCGTGGAAGACGGCGTCCACCGTCGAGCGCTACCAGCTC
GGCTTCCTCCTCGCCGCCCTTGGCTTCGACCTCTCCAACCTGCTCGTGTTCACCCCCATG
ACCATCGAGATGATGAAGAAGAGGCACAAGATTGAGAGGGACCTGAGCATTGGTGAGGAG
GTTGGGTGGTCGAAGAATGTTCAGGTGGCAAAAAACAACCCTACCCTTGCCGCAATCAAC
AAGAAGTTTGGGATGATCCACGGGCTCTCGTCTTTGGCCAACATCATGTCATTCGGCAGC
CTAGCCATGCATTCCTGGTACCTTGCTAGCAAGCTTGAGATGTGA

Peptide Sequence

PEP ID

Os12t0557400-02
PEP Infomation

pep chromosome:IRGSP-1.0:12:22710855:22713327:-1 gene:Os12g0557400 transcript:Os12t0557400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0557400-01);Conserved hypothetical protein. (Os12t0557400-02)
Sequence

MGWATRFLAAVCFFAAGVVFAPDVLLGARSGSGSGGGAAAAAKVAHLLCFATSWGAALWA
TFIGGIIMFKNLPRHQFGNLQGKLFPAYFMLISACAAVSVAAFAYLHPWKTASTVERYQL
GFLLAALGFDLSNLLVFTPMTIEMMKKRHKIERDLSIGEEVGWSKNVQVAKNNPTLAAIN
KKFGMIHGLSSLANIMSFGSLAMHSWYLASKLEM

Transcript Sequence

Transcript ID

Os12t0557400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:22710855:22713327:-1 gene:Os12g0557400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0557400-01);Conserved hypothetical protein. (Os12t0557400-02)
Sequence

AACTACCTCCTTCCCTCCTCCATCTCGACACCTCCTCCTCGTCTCCGGCCGCCGCTTCCC
CCTCGCCGCCGGCGCCTCCTCGAGACCGTCGAGATCGAGATAGAGAGAGAGTGATGGGGT
GGGCGACGCGGTTCCTGGCGGCGGTCTGCTTCTTCGCGGCGGGCGTCGTCTTCGCCCCCG
ACGTCCTCCTCGGCGCCCGCTCCGGCTCCGGCTCCGGCGGCGGCGCCGCCGCGGCCGCCA
AGGTGGCCCACCTCCTCTGCTTCGCCACCTCATGGGGCGCCGCCCTCTGGGCCACCTTCA
TCGGCGGCATCATCATGTTCAAGAATCTGCCGAGGCACCAGTTCGGGAACCTGCAGGGGA
AGTTGTTCCCGGCCTACTTCATGCTCATCTCCGCCTGCGCCGCCGTCTCCGTCGCCGCCT
TCGCCTACCTCCACCCGTGGAAGACGGCGTCCACCGTCGAGCGCTACCAGCTCGGCTTCC
TCCTCGCCGCCCTTGGCTTCGACCTCTCCAACCTGCTCGTGTTCACCCCCATGACCATCG
AGATGATGAAGAAGAGGCACAAGATTGAGAGGGACCTGAGCATTGGTGAGGAGGTTGGGT
GGTCGAAGAATGTTCAGGTGGCAAAAAACAACCCTACCCTTGCCGCAATCAACAAGAAGT
TTGGGATGATCCACGGGCTCTCGTCTTTGGCCAACATCATGTCATTCGGCAGCCTAGCCA
TGCATTCCTGGTACCTTGCTAGCAAGCTTGAGATGTGAAGTGAACAAACACCCTTGACCA
ACATTCAGTTGAATCAGATCTGATTGCATCACAATATTAATGTGGCAAAGCCTCATTTGG
AGAGCTTGCAAATATATTTACGTGTACAATGATTCGACTCGAGATTAGTTGTACTTAAAA
TAATGTACAGAATCCACGCATTTCTCGCCAGTTTATTATAAGTTCATGAACCAAAACTAT
TC