Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0556300-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:22635834:22640197:1 gene:Os12g0556300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calmodulin binding protein-like family protein. (Os12t0556300-01)
Sequence	ATGGAGGAATTAATGGCGCCGAAGAAGAGGGAGCTGCTGCTGCTGGAGCGCAGGGGGTCG GAGAAGCGCCTGCGGGTGACGGTCCCAGTCGCCGCCGCCGCCGCCGTGGCGGCCGTCGGT GTGGGGACGGCGGCGCTGGCGTCGCCGGCGACGAGGATGCTGCGCAAGATCGTGCTCGTG CTGCTCTTCCTGCTGCGAATGAGCGAGAGGGTCACGGTCGTGGAGAGCATCTCTCAGATT GGCCGTATGGTTCAGAGGCTTCACAATGCTCAGGGTGTTATTATCAAAAAATTGGAAAAT ATACAGGAAAACATGCTGGAGCGGATGGAAAACATGCAGGAGCGGATGGAGGATATCAGT CATGAAGTGAAACAATTGAAGCATCTGCATTCCAATCGTCATGCTGATCAACACCCAGGA CTGGAGCCAAACACAAATGTTCAACTGCGTTTCCTGGATAATCTGAAGACTCCTGTTTAC ACCGAAAAGAACATCACAGCTGAAAGCAACGAGGCTATCAGAATAGGTATCTTTGAAGGT GACAACATGATTACAGATGGCCCACTTTCCAAGGTGAAAGTCGAAATCGTAGTTCTCCGC GGTGATTTCTCCAACGATGGTCGGGTGAGCTGGACTGAAGAGCAGTTCAACAATCACATT GTGCAAGGTCGGAATGGGCAAGGATTCGTGTTGGGCGGTGATTGTGGTGTTTGGTTGAAA AAGGGGGAAAACCGCTTGGGCAAGATCCGTTTCAAGGAAGGATCATCCAGGACCCGCAGT CGGATGTTCATTTTGGGAGCAAGAGTATGCAAGAGCGAAAACACCGGTGTCCGAGTTCAG GAAGCTGTCATGAAGCCAGTTACCGTGTTGGATCGCAGAAATGAAGCAAATGAGAAGAGG CATCCTCCAATGCTGGACGATGAAGTGTTTCGCTTGGAGGAAATCTGCAAAGATGGGACT TACCACAAGAGGCTTCAGAAGGCTAAAATCTTCACAGTGCATGACTTCTTGAAGGCTTTG AACACGAACGCCAAGAAGCTCCGTGAAGAAGTTCTCCAGATGAAGAAGAAGACGAACTCA TGGGATAAAATGGTTGGGCATGCCAGGGAGTGCTGTCTCAGAGACCAGCATGAGCTGAAA GCGTATCAAAGTGAAGAAGAAAATGCGACACTTTTCTTCAACGGTGTGCATCAAATTGTT GGAGCAAAATTTGGTGGTGATTATGTCATATATGAAAATTTTGATCCAGCCCAAAAGACA AAAGTGAATAAACTGAAAGACCGTGCACATGCTAAATTGGATGACATTCCATCCGATTTT GTAATGAAAAACAACATTCCTGAACCGATCAGTCCAACTTCAGCAGCTGCTGCAGGCCCA TCAAATCGTTCTGATCATCAGATGCCAAATCAAGGAACTATAGGAGCTGAAAACTTGTGC AATGGTGTGGCGTTTTACTCGAATGCAATCTGCGACTGCAGCACCTCTAATCCTAATGAT GTGAGCACACATGATTATCCAGATCAAGCACCAACGCCATTTCCTGATTGGCAACAAGAT CTCCAAAGGCTGATGAGCTCTTCTGATACAATCGACTGGCCGAGCTTTGAGAGGATTGTA TTGGGTGGCACCTCAGAGGAATCGAGTTCTGCTCAACACCAAGTTCATCAACTCCATGAA AGCATGCCTCCTGCTACATCGCCATGGGTGGCGGCGCCGCAATCGCGTGCTCAACACGGG GAGGAGCCTAGCAGGTTACCATTTCCAGGATCAGACCACAATAACAACTGTTAG

Peptide Sequence

PEP ID	Os12t0556300-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:22635834:22640197:1 gene:Os12g0556300 transcript:Os12t0556300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calmodulin binding protein-like family protein. (Os12t0556300-01)
Sequence	MEELMAPKKRELLLLERRGSEKRLRVTVPVAAAAAVAAVGVGTAALASPATRMLRKIVLV LLFLLRMSERVTVVESISQIGRMVQRLHNAQGVIIKKLENIQENMLERMENMQERMEDIS HEVKQLKHLHSNRHADQHPGLEPNTNVQLRFLDNLKTPVYTEKNITAESNEAIRIGIFEG DNMITDGPLSKVKVEIVVLRGDFSNDGRVSWTEEQFNNHIVQGRNGQGFVLGGDCGVWLK KGENRLGKIRFKEGSSRTRSRMFILGARVCKSENTGVRVQEAVMKPVTVLDRRNEANEKR HPPMLDDEVFRLEEICKDGTYHKRLQKAKIFTVHDFLKALNTNAKKLREEVLQMKKKTNS WDKMVGHARECCLRDQHELKAYQSEEENATLFFNGVHQIVGAKFGGDYVIYENFDPAQKT KVNKLKDRAHAKLDDIPSDFVMKNNIPEPISPTSAAAAGPSNRSDHQMPNQGTIGAENLC NGVAFYSNAICDCSTSNPNDVSTHDYPDQAPTPFPDWQQDLQRLMSSSDTIDWPSFERIV LGGTSEESSSAQHQVHQLHESMPPATSPWVAAPQSRAQHGEEPSRLPFPGSDHNNNC

Transcript Sequence

Transcript ID	Os12t0556300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:22635834:22640197:1 gene:Os12g0556300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calmodulin binding protein-like family protein. (Os12t0556300-01)
Sequence	GAAAGAGAGAGAGAGCGCGCAATCCAAGAACACGAGAGAGAGAGGAGTCCAAGAACGAGA GAGAGAGAGAGAGGGGAGGGGAATGGAGGAATTAATGGCGCCGAAGAAGAGGGAGCTGCT GCTGCTGGAGCGCAGGGGGTCGGAGAAGCGCCTGCGGGTGACGGTCCCAGTCGCCGCCGC CGCCGCCGTGGCGGCCGTCGGTGTGGGGACGGCGGCGCTGGCGTCGCCGGCGACGAGGAT GCTGCGCAAGATCGTGCTCGTGCTGCTCTTCCTGCTGCGAATGAGCGAGAGGGTCACGGT CGTGGAGAGCATCTCTCAGATTGGCCGTATGGTTCAGAGGCTTCACAATGCTCAGGGTGT TATTATCAAAAAATTGGAAAATATACAGGAAAACATGCTGGAGCGGATGGAAAACATGCA GGAGCGGATGGAGGATATCAGTCATGAAGTGAAACAATTGAAGCATCTGCATTCCAATCG TCATGCTGATCAACACCCAGGACTGGAGCCAAACACAAATGTTCAACTGCGTTTCCTGGA TAATCTGAAGACTCCTGTTTACACCGAAAAGAACATCACAGCTGAAAGCAACGAGGCTAT CAGAATAGGTATCTTTGAAGGTGACAACATGATTACAGATGGCCCACTTTCCAAGGTGAA AGTCGAAATCGTAGTTCTCCGCGGTGATTTCTCCAACGATGGTCGGGTGAGCTGGACTGA AGAGCAGTTCAACAATCACATTGTGCAAGGTCGGAATGGGCAAGGATTCGTGTTGGGCGG TGATTGTGGTGTTTGGTTGAAAAAGGGGGAAAACCGCTTGGGCAAGATCCGTTTCAAGGA AGGATCATCCAGGACCCGCAGTCGGATGTTCATTTTGGGAGCAAGAGTATGCAAGAGCGA AAACACCGGTGTCCGAGTTCAGGAAGCTGTCATGAAGCCAGTTACCGTGTTGGATCGCAG AAATGAAGCAAATGAGAAGAGGCATCCTCCAATGCTGGACGATGAAGTGTTTCGCTTGGA GGAAATCTGCAAAGATGGGACTTACCACAAGAGGCTTCAGAAGGCTAAAATCTTCACAGT GCATGACTTCTTGAAGGCTTTGAACACGAACGCCAAGAAGCTCCGTGAAGAAGTTCTCCA GATGAAGAAGAAGACGAACTCATGGGATAAAATGGTTGGGCATGCCAGGGAGTGCTGTCT CAGAGACCAGCATGAGCTGAAAGCGTATCAAAGTGAAGAAGAAAATGCGACACTTTTCTT CAACGGTGTGCATCAAATTGTTGGAGCAAAATTTGGTGGTGATTATGTCATATATGAAAA TTTTGATCCAGCCCAAAAGACAAAAGTGAATAAACTGAAAGACCGTGCACATGCTAAATT GGATGACATTCCATCCGATTTTGTAATGAAAAACAACATTCCTGAACCGATCAGTCCAAC TTCAGCAGCTGCTGCAGGCCCATCAAATCGTTCTGATCATCAGATGCCAAATCAAGGAAC TATAGGAGCTGAAAACTTGTGCAATGGTGTGGCGTTTTACTCGAATGCAATCTGCGACTG CAGCACCTCTAATCCTAATGATGTGAGCACACATGATTATCCAGATCAAGCACCAACGCC ATTTCCTGATTGGCAACAAGATCTCCAAAGGCTGATGAGCTCTTCTGATACAATCGACTG GCCGAGCTTTGAGAGGATTGTATTGGGTGGCACCTCAGAGGAATCGAGTTCTGCTCAACA CCAAGTTCATCAACTCCATGAAAGCATGCCTCCTGCTACATCGCCATGGGTGGCGGCGCC GCAATCGCGTGCTCAACACGGGGAGGAGCCTAGCAGGTTACCATTTCCAGGATCAGACCA CAATAACAACTGTTAGTAACAAATTGACAGTGCAGTTCTTCTATGCCAAAAAAAGAAAAA AAAAAGGCAATGCAGTTATCAGGTTGCTGCACAGCTATGTACTCAGTTGTCTCGTCAGTG TAGTGTACAGATTTGCAGTGTGCAATTCTGATTTAGGTTGTGGCTATCTTATTCATCTGC AGATCATTAGTGATCTACGGTGTGTTTGTAATGTGTAACTGTAAGTCTGTAACAATGCAG GTGGTATGTCTGCTGGCCAAAAGAAAGAAAAAGAAATGATCTGTGATGTATTT