Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0556200-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:22628910:22632952:1 gene:Os12g0556200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calmodulin binding protein-like family protein. (Os12t0556200-01);Non-protein coding transcript. (Os12t0556200-02)
Sequence	ATGCCGCCGAAGCGGCGGCCGGAGGAGGAGTCGCCGCAGGCGGCGGCGCTGAAGAAGCGG TGCCGGTCGTTCGACCTAGAGATCAGGGGTTGCAGGCACCTGCAGGAGCTCGCCGCCGGC TGCGTCCGCACGCTCGAGGCCGCGCTCGAGTCCGCCATTAGCCGGATTCCAGAGGAGGTG ACAAAAGCACTTACAAGCTTCCTAATCCGTGCTCCTAGAACACTGTCTGATCAGAACCAG CCTCCAAGGTACAAGCTTAGGTTCTCAAATGGCTTGAGCAATGAAGTTTTCACAAAGAAA GGAATCTGTGATGTTAATGGAGAGTCTCTCAAGATATCTGTGCATGTAAACAACCCACAA GAGGCCTGCTCGCATCGCCTTCTTTCTGCTAAGATCAGAGTTGTTGTTCTTGATGGTGAC TTCAACAAGAATGATCAGGGGTGCTGGACATCAGAGGAGTTCAGAAACCACATAGTGCGC CCACGTGATAAAGTTGGGACTGTGCTGACTGGAGAGCTTGAGCTTAGCCTGAAAAATGGA GAGGCTTACATCCATGATGCCACTTTTGTTGATAACTCCAAGTTCATGAGGAGTGGTAAG TTCAGACTTGGGGTAATGGTTATTGATGATCTCGGTGAACGTATTCAGGAAGGCATAACT GAACCTTTCGTTGTGAAGGATCGTCGCGGAGAAGGTTCCAAAAAGCATGAAATTCCATCA TTGGATGATGATGTCTGGCGCCTGAAGAAGATATCAAAAGATGGTGTCTTCCATGATGCA TTGAAACAGAGTGGCATTTCAAACGTGAAGGAATTCCTTAGGCTGTACTATACTGATGAG CCAGCTCTGCGCAAAATTCTTATTAAGGCCACTGATAAAGTTTGGACGACTATCATTGAG CATGCTAAGAAGTGTGATCCTGGAAGAGAGCTGTACTCTTTCTTGCCGGAAAACCGCAAT GTTGTGCTGTTCTTCAACTCTATCCATCAGATTGTTGGGGTGATAACTGGTGACCATTAC ACTCCCTTCAGTGATCTTGACAAGTCTATGCAGGATGATGTAGGACAACTGAGCAAATTA GCATATGCAGATTTGAACCACTTCCTACCTGATTTTGAAATGAAAAATGGCAAACCAAGA CAAATCAACCAATGCGCTTTCCAAGAATCGAGAATGGTGGAGCCTAAATTTACTGACCAA ATCCAAGGACATATGGATCCTAATTTTGCTGGCCTTATACAAGGAAATATGGATCAAAAG AAGAGAAATGTCCATGAATCTGATGATCAGCAAGGAACTTCTGGCAGTCATCCCAGGCAG TGCAAATTATCAAGGTTTGGATCTGTGCGAGTGACACACGTGGCATCCTTGAACAAAAAC GATGAAGATTCTTTGGACTTCAGTTTCCTCCTGAATTCTCTATCTGACCAACATGATGCA AGCATGAACACAAATGAGATAGCAGCCTCGGTGACATTCCATTGTCCAACCGCTTCTACA AATGAAATTACTGGATCAGTGGTGATGAGGCAAGCATCTTTCAGAATAGATCATCCAGCT TGTGAAAATGATGCTTCAGTTGCTGAATTCCACCAAGAGCAACAGGTGGTTACCGCACAA TTTGATCCATCTTTTTTAGCTGTACTCGCTGATGCCCCCATGTACTCAACGCACAACAGC TTCAAAGAGAGTGAATGCCACGAGGCGCTACAAAAGCTGTCTGAAGACTGA

Peptide Sequence

PEP ID	Os12t0556200-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:22628910:22632952:1 gene:Os12g0556200 transcript:Os12t0556200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calmodulin binding protein-like family protein. (Os12t0556200-01);Non-protein coding transcript. (Os12t0556200-02)
Sequence	MPPKRRPEEESPQAAALKKRCRSFDLEIRGCRHLQELAAGCVRTLEAALESAISRIPEEV TKALTSFLIRAPRTLSDQNQPPRYKLRFSNGLSNEVFTKKGICDVNGESLKISVHVNNPQ EACSHRLLSAKIRVVVLDGDFNKNDQGCWTSEEFRNHIVRPRDKVGTVLTGELELSLKNG EAYIHDATFVDNSKFMRSGKFRLGVMVIDDLGERIQEGITEPFVVKDRRGEGSKKHEIPS LDDDVWRLKKISKDGVFHDALKQSGISNVKEFLRLYYTDEPALRKILIKATDKVWTTIIE HAKKCDPGRELYSFLPENRNVVLFFNSIHQIVGVITGDHYTPFSDLDKSMQDDVGQLSKL AYADLNHFLPDFEMKNGKPRQINQCAFQESRMVEPKFTDQIQGHMDPNFAGLIQGNMDQK KRNVHESDDQQGTSGSHPRQCKLSRFGSVRVTHVASLNKNDEDSLDFSFLLNSLSDQHDA SMNTNEIAASVTFHCPTASTNEITGSVVMRQASFRIDHPACENDASVAEFHQEQQVVTAQ FDPSFLAVLADAPMYSTHNSFKESECHEALQKLSED

Transcript Sequence

Transcript ID	Os12t0556200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:22628910:22632952:1 gene:Os12g0556200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calmodulin binding protein-like family protein. (Os12t0556200-01);Non-protein coding transcript. (Os12t0556200-02)
Sequence	ACTACCGCCATCGATCTTCTTTCTCTTCCCCAGCTCGACCACGACCACTCCCGGGAGGGA GAGGGAGAGGGAGAGCAGCAGCAGCGGTAGCCAGTTAGTCCAGCTGATGCCGCCGAAGCG GCGGCCGGAGGAGGAGTCGCCGCAGGCGGCGGCGCTGAAGAAGCGGTGCCGGTCGTTCGA CCTAGAGATCAGGGGTTGCAGGCACCTGCAGGAGCTCGCCGCCGGCTGCGTCCGCACGCT CGAGGCCGCGCTCGAGTCCGCCATTAGCCGGATTCCAGAGGAGGTGACAAAAGCACTTAC AAGCTTCCTAATCCGTGCTCCTAGAACACTGTCTGATCAGAACCAGCCTCCAAGGTACAA GCTTAGGTTCTCAAATGGCTTGAGCAATGAAGTTTTCACAAAGAAAGGAATCTGTGATGT TAATGGAGAGTCTCTCAAGATATCTGTGCATGTAAACAACCCACAAGAGGCCTGCTCGCA TCGCCTTCTTTCTGCTAAGATCAGAGTTGTTGTTCTTGATGGTGACTTCAACAAGAATGA TCAGGGGTGCTGGACATCAGAGGAGTTCAGAAACCACATAGTGCGCCCACGTGATAAAGT TGGGACTGTGCTGACTGGAGAGCTTGAGCTTAGCCTGAAAAATGGAGAGGCTTACATCCA TGATGCCACTTTTGTTGATAACTCCAAGTTCATGAGGAGTGGTAAGTTCAGACTTGGGGT AATGGTTATTGATGATCTCGGTGAACGTATTCAGGAAGGCATAACTGAACCTTTCGTTGT GAAGGATCGTCGCGGAGAAGGTTCCAAAAAGCATGAAATTCCATCATTGGATGATGATGT CTGGCGCCTGAAGAAGATATCAAAAGATGGTGTCTTCCATGATGCATTGAAACAGAGTGG CATTTCAAACGTGAAGGAATTCCTTAGGCTGTACTATACTGATGAGCCAGCTCTGCGCAA AATTCTTATTAAGGCCACTGATAAAGTTTGGACGACTATCATTGAGCATGCTAAGAAGTG TGATCCTGGAAGAGAGCTGTACTCTTTCTTGCCGGAAAACCGCAATGTTGTGCTGTTCTT CAACTCTATCCATCAGATTGTTGGGGTGATAACTGGTGACCATTACACTCCCTTCAGTGA TCTTGACAAGTCTATGCAGGATGATGTAGGACAACTGAGCAAATTAGCATATGCAGATTT GAACCACTTCCTACCTGATTTTGAAATGAAAAATGGCAAACCAAGACAAATCAACCAATG CGCTTTCCAAGAATCGAGAATGGTGGAGCCTAAATTTACTGACCAAATCCAAGGACATAT GGATCCTAATTTTGCTGGCCTTATACAAGGAAATATGGATCAAAAGAAGAGAAATGTCCA TGAATCTGATGATCAGCAAGGAACTTCTGGCAGTCATCCCAGGCAGTGCAAATTATCAAG GTTTGGATCTGTGCGAGTGACACACGTGGCATCCTTGAACAAAAACGATGAAGATTCTTT GGACTTCAGTTTCCTCCTGAATTCTCTATCTGACCAACATGATGCAAGCATGAACACAAA TGAGATAGCAGCCTCGGTGACATTCCATTGTCCAACCGCTTCTACAAATGAAATTACTGG ATCAGTGGTGATGAGGCAAGCATCTTTCAGAATAGATCATCCAGCTTGTGAAAATGATGC TTCAGTTGCTGAATTCCACCAAGAGCAACAGGTGGTTACCGCACAATTTGATCCATCTTT TTTAGCTGTACTCGCTGATGCCCCCATGTACTCAACGCACAACAGCTTCAAAGAGAGTGA ATGCCACGAGGCGCTACAAAAGCTGTCTGAAGACTGATTTCCCTAAGAACAATGAACATT CATTTTGATGCATATTTAGGTCAAGTACTGTTTTGAGTCTCATTTTCTTAATATGCCAGC TTGGTATTAGTGATTGCTTCTATTTAATTTGTAATGTGCTCATATTCTTGTACTATTTAC TGGATCATTATTATTTAGTTACAAGAACTTTGGCTCTGTGCATGCTAGATGCAGAGGCCG GGGATGTAATTCATCTTCCTTATTAAAAACAATAAATATTGTGTCT