Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0555600-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:22602934:22607307:-1 gene:Os12g0555600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NARROW LEAF AND DWARF 1 description:Cellulose synthase-like protein, Cell wall biosynthesis (Os12t0555600-01)
Sequence	ATGTCGCGGCGGCTGTCGTTGCCGGCGGGGGCGCCGGTGACGGTGGCGGTGTCGCCGGTG CGGAGCCCGGGGGGTGACGCGGTGGTGAGGAGGGGGAGCGGGCTGACGTCCCCCGTGCCG AGGCACTCGCTCGGGTCGTCCACCGCCACGCTGCAGGTGTCGCCGGTGAGGCGGAGCGGC GGGAGTAGGTACCTCGGCGCGTCGAGGGATGGCGGCGCCGATGAGAGCGCCGAGTTCGTG CACTACACCGTGCACATCCCGCCCACGCCCGACCGGGCGACGGCGTCCGTGGCGAGCGAG GCGGAGGCGGCGGCGGAGGCCGAGGAGGTGCACCGGCCGCAGCGGAGCTACATCTCCGGG ACGATATTCACCGGGGGGCTCAACTGCGCCACGCGCGGCCACGTGCTCAACTTCTCCGGC GAGGGCGGCGCCACCGCCGCCTCCAGGGCGGCGGCGTCGGGGAACATGTCGTGCAAGATG CGCGGGTGCGACATGCCCGCGTTCCTCAACGGCGGCCGCCCGCCGTGCGACTGCGGGTTC ATGATCTGCAAGGAGTGCTACGCGGAGTGCGCCGCGGGCAACTGCCCCGGTTGCAAGGAG GCCTTCTCCGCGGGCTCCGACACCGACGAATCCGACTCCGTCACCGACGACGACGACGAC GAGGCCGTCTCCTCCTCCGAGGAGAGGGACCAGCTGCCGCTGACATCCATGGCGAGGAAA TTTTCCGTGGTGCACTCCATGAAGGTCCCCGGCGCCGCCGCCAACGGCAACGGCAAGCCG GCCGAGTTCGACCACGCCCGCTGGCTCTTCGAGACCAAGGGCACCTATGGCTACGGCAAC GCTCTCTGGCCCAAGGACGGCCACGCCCATAGCGGCGCCGGCTTCGTCGCCGCCGACGAG CCCCCCAACTTCGGTGCCCGCTGCCGCCGCCCCCTCACCAGAAAAACCAGCGTCTCCCAA GCCATTCTCAGCCCCTACAGGTTGTTGATTGCGATTCGGCTGGTGGCGCTGGGGTTCTTC CTCGCGTGGAGGATTCGGCATCCGAATCCGGAGGCGGTGTGGCTGTGGGCGATGTCGGTG GCGTGCGAGGTGTGGTTCGCCTTCTCATGGCTGCTCGACAGCCTCCCCAAGCTCTGCCCC GTCCACCGCGCCGCCGACCTCGCCGTCCTCGCCGAGCGGTTCGAGTCGCCGACGGCGCGC AACCCCAAGGGCCGCTCCGACCTCCCCGGGATCGACGTGTTCGTCACCAGCGCCGACCCG GAGAAGGAGCCGCCGCTGGTCACCGCCAACACCATCCTCTCCATCCTCGCCGCGGACTAC CCCGTCGAGAAGCTCGCTTGCTACCTCTCCGACGACGGCGGCGCGCTGCTGTCGTTCGAG GCGCTCGCCGAGACGGCCAGCTTCGCGCGCACGTGGGTGCCATTCTGCCGCAAGCACGGC GTCGAGCCGCGGTGCCCCGAGGCGTATTTCGGCCAGAAGAGGGACTTCCTCAAGAACAAG GTGCGCGTCGACTTCGTCCGCGAGAGGCGGAAGGTGAAGCGCGAGTACGACGAGTTCAAG GTGCGGGTGAACTCGCTCCCCGAGGCGATCCGGCGGCGCTCCGACGCGTACAACGCCGGC GAGGAACTGCGCGCCAGGAGGCGGCAGCAGGAGGAGGCCGCCGCCGCGGCTGCCGCCGGC AACGGCGAGCTTGGAGCGGCGGCGGTCGAGACCGCCGCCGTGAAGGCCACGTGGATGTCG GACGGCTCGCACTGGCCGGGGACGTGGACGTGCCCCGCGGCGGACCACGCCCGCGGCGAC CACGCCGGGATCATCCAGGCGATGCTGGCGCCGCCGACCTCGGAGCCGGTGATGGGAGGC GAGGCGGCGGAGTGCGGCGGGCTGATCGACACCACGGGCGTGGACGTCCGCCTCCCGATG CTGGTGTACGTGTCGCGGGAGAAGCGCCCGGGCTACGATCACAACAAGAAGGCCGGCGCC ATGAACGCGCTGGTGCGGACGAGCGCCATCATGTCGAACGGGCCCTTCATCCTCAACCTC GACTGCGACCACTACGTGCACAACTCGTCGGCGCTCCGGGAGGGGATGTGCTTCATGCTC GACCGCGGCGGCGACCGCGTGTGCTTCGTCCAGTTCCCGCAGCGGTTCGAGGGCGTCGAC CCCAGCGACCGGTACGCCAACCACAACCTCGTCTTCTTCGACGTGTCCATGCGCGCCATG GACGGGCTTCAGGGCCCCATGTACGTCGGCACCGGCTGCGTCTTCCGCCGCACCGCGCTG TACGGCTTCAGCCCGCCCCGCGCCACCGAGCACCATGGCTGGCTCGGCCGCAGGAAGATC AAGCTGTTCCTCACCAAGAAGAAGAGCATGGGCAAGAAGACGGACAGGGCCGAGGACGAC ACCGAGATGATGCTGCCGCCGATCGAGGACGACGACGGCGGCGCCGACATTGAGGCCTCG GCTATGCTACCGAAGCGGTTCGGCGGGTCGGCGACGTTCGTGGCGTCGATACCCGTGGCG GAGTACCAGGGTCGGCTGCTGCAGGACACCCCCGGGTGCCACCACGGCCGCCCTGCGGGC GCGCTCGCTGTGCCGCGCGAGCCGCTCGACGCGGCGACGGTGGCGGAGGCCATCGGCGTG ATCTCCTGCTTCTACGAGGAGAAGACGGAGTGGGGGCGGCGCATCGGGTGGATCTACGGC TCCGTCACCGAGGACGTGGTCACCGGCTACCGGATGCACAACCGCGGGTGGCGCTCCGTC TACTGCGTGACGCCGCGGCGCGACGCGTTCCGCGGCACGGCGCCGATCAACCTCACCGAC CGCCTCCACCAGGTGCTCCGGTGGGCGACGGGCTCCGTCGAGATCTTCTTCTCCCGCAAC AACGCCCTCTTCGCCTCGCCGCGGATGAAGCTGCTGCAGCGCGTCGCCTACTTCAACGCC GGGATGTACCCCTTCACCTCCGTGTTCCTCCTCGCCTACTGCCTCCTCCCGGCCGTCTCC CTCTTCTCCGGCAAGTTCATCGTGCAGCGACTCAGCGCCACCTTCCTCGCCTTCCTCCTC GTCATCACCCTCACCCTCTGCCTCCTCGCCCTGCTCGAGATCAAGTGGTCCGGGATCACG CTCCACGAGTGGTGGCGCAACGAGCAGTTCTGGGTGATCGGCGGCACCAGCGCGCACCCG GCCGCCGTGCTGCAGGGCCTACTCAAGGTGATCGCCGGCGTGGACATCTCCTTCACGCTG ACCTCCAAGCCGGGGAACGGCGGCGGCGATGGCGGGGTCGGCGGCGAGGGGAACGACGAC GAGGCGTTCGCGGAGCTGTACGAGGTGAGGTGGAGCTACCTGATGGTGCCGCCGGTGACG ATCATGATGGTGAACGCGGTGGCGATCGCGGTGGCGGCGGCGAGGACGCTGTACAGCGAG TTCCCGCAGTGGAGCAAGCTGCTCGGCGGCGCCTTCTTCAGCTTCTGGGTGCTGTGCCAC CTCTACCCGTTCGCCAAGGGCCTCCTCGGCCGCCGCGGCCGCGTGCCCACCATCGTCTTC GTCTGGTCGGGCCTCATCTCCATGATCATCTCCCTCCTCTGGGTCTACATCAACCCGCCC GCCGGCGCCCGGGAGCGCATCGGCGGCGGCGGATTCAGCTTCCCATAG

Peptide Sequence

PEP ID	Os12t0555600-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:22602934:22607307:-1 gene:Os12g0555600 transcript:Os12t0555600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NARROW LEAF AND DWARF 1 description:Cellulose synthase-like protein, Cell wall biosynthesis (Os12t0555600-01)
Sequence	MSRRLSLPAGAPVTVAVSPVRSPGGDAVVRRGSGLTSPVPRHSLGSSTATLQVSPVRRSG GSRYLGASRDGGADESAEFVHYTVHIPPTPDRATASVASEAEAAAEAEEVHRPQRSYISG TIFTGGLNCATRGHVLNFSGEGGATAASRAAASGNMSCKMRGCDMPAFLNGGRPPCDCGF MICKECYAECAAGNCPGCKEAFSAGSDTDESDSVTDDDDDEAVSSSEERDQLPLTSMARK FSVVHSMKVPGAAANGNGKPAEFDHARWLFETKGTYGYGNALWPKDGHAHSGAGFVAADE PPNFGARCRRPLTRKTSVSQAILSPYRLLIAIRLVALGFFLAWRIRHPNPEAVWLWAMSV ACEVWFAFSWLLDSLPKLCPVHRAADLAVLAERFESPTARNPKGRSDLPGIDVFVTSADP EKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLSFEALAETASFARTWVPFCRKHG VEPRCPEAYFGQKRDFLKNKVRVDFVRERRKVKREYDEFKVRVNSLPEAIRRRSDAYNAG EELRARRRQQEEAAAAAAAGNGELGAAAVETAAVKATWMSDGSHWPGTWTCPAADHARGD HAGIIQAMLAPPTSEPVMGGEAAECGGLIDTTGVDVRLPMLVYVSREKRPGYDHNKKAGA MNALVRTSAIMSNGPFILNLDCDHYVHNSSALREGMCFMLDRGGDRVCFVQFPQRFEGVD PSDRYANHNLVFFDVSMRAMDGLQGPMYVGTGCVFRRTALYGFSPPRATEHHGWLGRRKI KLFLTKKKSMGKKTDRAEDDTEMMLPPIEDDDGGADIEASAMLPKRFGGSATFVASIPVA EYQGRLLQDTPGCHHGRPAGALAVPREPLDAATVAEAIGVISCFYEEKTEWGRRIGWIYG SVTEDVVTGYRMHNRGWRSVYCVTPRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRN NALFASPRMKLLQRVAYFNAGMYPFTSVFLLAYCLLPAVSLFSGKFIVQRLSATFLAFLL VITLTLCLLALLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTL TSKPGNGGGDGGVGGEGNDDEAFAELYEVRWSYLMVPPVTIMMVNAVAIAVAAARTLYSE FPQWSKLLGGAFFSFWVLCHLYPFAKGLLGRRGRVPTIVFVWSGLISMIISLLWVYINPP AGARERIGGGGFSFP

Transcript Sequence

Transcript ID	Os12t0555600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:22602934:22607307:-1 gene:Os12g0555600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NARROW LEAF AND DWARF 1 description:Cellulose synthase-like protein, Cell wall biosynthesis (Os12t0555600-01)
Sequence	ACTCATCGATCCCCTCCTCCATTCACATGAGAGATCCTCGAGATCCCTATAATTTCTCCC CCAATTCGTCGCGGCCAATCCTTCCCCCGAGCTCGAGCTGATCGGCGTGAGCTTTTTCTC GCCGGAGTTGAGCTGAGCCCGGCGGTTTTCGGGTGTGGATTTGAGCTTGAGCTGAAGTGA AGTGAGCTTGTGGTTTTGAGGTGATTTGTGGGGGATGTCGCGGCGGCTGTCGTTGCCGGC GGGGGCGCCGGTGACGGTGGCGGTGTCGCCGGTGCGGAGCCCGGGGGGTGACGCGGTGGT GAGGAGGGGGAGCGGGCTGACGTCCCCCGTGCCGAGGCACTCGCTCGGGTCGTCCACCGC CACGCTGCAGGTGTCGCCGGTGAGGCGGAGCGGCGGGAGTAGGTACCTCGGCGCGTCGAG GGATGGCGGCGCCGATGAGAGCGCCGAGTTCGTGCACTACACCGTGCACATCCCGCCCAC GCCCGACCGGGCGACGGCGTCCGTGGCGAGCGAGGCGGAGGCGGCGGCGGAGGCCGAGGA GGTGCACCGGCCGCAGCGGAGCTACATCTCCGGGACGATATTCACCGGGGGGCTCAACTG CGCCACGCGCGGCCACGTGCTCAACTTCTCCGGCGAGGGCGGCGCCACCGCCGCCTCCAG GGCGGCGGCGTCGGGGAACATGTCGTGCAAGATGCGCGGGTGCGACATGCCCGCGTTCCT CAACGGCGGCCGCCCGCCGTGCGACTGCGGGTTCATGATCTGCAAGGAGTGCTACGCGGA GTGCGCCGCGGGCAACTGCCCCGGTTGCAAGGAGGCCTTCTCCGCGGGCTCCGACACCGA CGAATCCGACTCCGTCACCGACGACGACGACGACGAGGCCGTCTCCTCCTCCGAGGAGAG GGACCAGCTGCCGCTGACATCCATGGCGAGGAAATTTTCCGTGGTGCACTCCATGAAGGT CCCCGGCGCCGCCGCCAACGGCAACGGCAAGCCGGCCGAGTTCGACCACGCCCGCTGGCT CTTCGAGACCAAGGGCACCTATGGCTACGGCAACGCTCTCTGGCCCAAGGACGGCCACGC CCATAGCGGCGCCGGCTTCGTCGCCGCCGACGAGCCCCCCAACTTCGGTGCCCGCTGCCG CCGCCCCCTCACCAGAAAAACCAGCGTCTCCCAAGCCATTCTCAGCCCCTACAGGTTGTT GATTGCGATTCGGCTGGTGGCGCTGGGGTTCTTCCTCGCGTGGAGGATTCGGCATCCGAA TCCGGAGGCGGTGTGGCTGTGGGCGATGTCGGTGGCGTGCGAGGTGTGGTTCGCCTTCTC ATGGCTGCTCGACAGCCTCCCCAAGCTCTGCCCCGTCCACCGCGCCGCCGACCTCGCCGT CCTCGCCGAGCGGTTCGAGTCGCCGACGGCGCGCAACCCCAAGGGCCGCTCCGACCTCCC CGGGATCGACGTGTTCGTCACCAGCGCCGACCCGGAGAAGGAGCCGCCGCTGGTCACCGC CAACACCATCCTCTCCATCCTCGCCGCGGACTACCCCGTCGAGAAGCTCGCTTGCTACCT CTCCGACGACGGCGGCGCGCTGCTGTCGTTCGAGGCGCTCGCCGAGACGGCCAGCTTCGC GCGCACGTGGGTGCCATTCTGCCGCAAGCACGGCGTCGAGCCGCGGTGCCCCGAGGCGTA TTTCGGCCAGAAGAGGGACTTCCTCAAGAACAAGGTGCGCGTCGACTTCGTCCGCGAGAG GCGGAAGGTGAAGCGCGAGTACGACGAGTTCAAGGTGCGGGTGAACTCGCTCCCCGAGGC GATCCGGCGGCGCTCCGACGCGTACAACGCCGGCGAGGAACTGCGCGCCAGGAGGCGGCA GCAGGAGGAGGCCGCCGCCGCGGCTGCCGCCGGCAACGGCGAGCTTGGAGCGGCGGCGGT CGAGACCGCCGCCGTGAAGGCCACGTGGATGTCGGACGGCTCGCACTGGCCGGGGACGTG GACGTGCCCCGCGGCGGACCACGCCCGCGGCGACCACGCCGGGATCATCCAGGCGATGCT GGCGCCGCCGACCTCGGAGCCGGTGATGGGAGGCGAGGCGGCGGAGTGCGGCGGGCTGAT CGACACCACGGGCGTGGACGTCCGCCTCCCGATGCTGGTGTACGTGTCGCGGGAGAAGCG CCCGGGCTACGATCACAACAAGAAGGCCGGCGCCATGAACGCGCTGGTGCGGACGAGCGC CATCATGTCGAACGGGCCCTTCATCCTCAACCTCGACTGCGACCACTACGTGCACAACTC GTCGGCGCTCCGGGAGGGGATGTGCTTCATGCTCGACCGCGGCGGCGACCGCGTGTGCTT CGTCCAGTTCCCGCAGCGGTTCGAGGGCGTCGACCCCAGCGACCGGTACGCCAACCACAA CCTCGTCTTCTTCGACGTGTCCATGCGCGCCATGGACGGGCTTCAGGGCCCCATGTACGT CGGCACCGGCTGCGTCTTCCGCCGCACCGCGCTGTACGGCTTCAGCCCGCCCCGCGCCAC CGAGCACCATGGCTGGCTCGGCCGCAGGAAGATCAAGCTGTTCCTCACCAAGAAGAAGAG CATGGGCAAGAAGACGGACAGGGCCGAGGACGACACCGAGATGATGCTGCCGCCGATCGA GGACGACGACGGCGGCGCCGACATTGAGGCCTCGGCTATGCTACCGAAGCGGTTCGGCGG GTCGGCGACGTTCGTGGCGTCGATACCCGTGGCGGAGTACCAGGGTCGGCTGCTGCAGGA CACCCCCGGGTGCCACCACGGCCGCCCTGCGGGCGCGCTCGCTGTGCCGCGCGAGCCGCT CGACGCGGCGACGGTGGCGGAGGCCATCGGCGTGATCTCCTGCTTCTACGAGGAGAAGAC GGAGTGGGGGCGGCGCATCGGGTGGATCTACGGCTCCGTCACCGAGGACGTGGTCACCGG CTACCGGATGCACAACCGCGGGTGGCGCTCCGTCTACTGCGTGACGCCGCGGCGCGACGC GTTCCGCGGCACGGCGCCGATCAACCTCACCGACCGCCTCCACCAGGTGCTCCGGTGGGC GACGGGCTCCGTCGAGATCTTCTTCTCCCGCAACAACGCCCTCTTCGCCTCGCCGCGGAT GAAGCTGCTGCAGCGCGTCGCCTACTTCAACGCCGGGATGTACCCCTTCACCTCCGTGTT CCTCCTCGCCTACTGCCTCCTCCCGGCCGTCTCCCTCTTCTCCGGCAAGTTCATCGTGCA GCGACTCAGCGCCACCTTCCTCGCCTTCCTCCTCGTCATCACCCTCACCCTCTGCCTCCT CGCCCTGCTCGAGATCAAGTGGTCCGGGATCACGCTCCACGAGTGGTGGCGCAACGAGCA GTTCTGGGTGATCGGCGGCACCAGCGCGCACCCGGCCGCCGTGCTGCAGGGCCTACTCAA GGTGATCGCCGGCGTGGACATCTCCTTCACGCTGACCTCCAAGCCGGGGAACGGCGGCGG CGATGGCGGGGTCGGCGGCGAGGGGAACGACGACGAGGCGTTCGCGGAGCTGTACGAGGT GAGGTGGAGCTACCTGATGGTGCCGCCGGTGACGATCATGATGGTGAACGCGGTGGCGAT CGCGGTGGCGGCGGCGAGGACGCTGTACAGCGAGTTCCCGCAGTGGAGCAAGCTGCTCGG CGGCGCCTTCTTCAGCTTCTGGGTGCTGTGCCACCTCTACCCGTTCGCCAAGGGCCTCCT CGGCCGCCGCGGCCGCGTGCCCACCATCGTCTTCGTCTGGTCGGGCCTCATCTCCATGAT CATCTCCCTCCTCTGGGTCTACATCAACCCGCCCGCCGGCGCCCGGGAGCGCATCGGCGG CGGCGGATTCAGCTTCCCATAGCCGAAGAAGAAGAAGAAGAAGAAAGAAGTTATTTATCA GTAGTGTAGTGGTGTCGAGTTCAGTTTCTTGAAGCTCTGAACTTTCTGAAGCTCACATGA AGGAGTGCTTGCTTCATGGGGCGTGTTGTCAAATTCAGTTCAGTAAAAGTACTTTTACCG AAGTATTAGGTGTGATTAAGCGATTGTTTGTGTATCAATTAAGTTACTTGTGATTAATTG ATACTGATTATGTATCAAATATTGGAGACATGTCATATGATT