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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0555300-00
CDS Infomation

cds chromosome:IRGSP-1.0:12:22595531:22596804:1 gene:Os12g0555300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pathogenesis-related gene 10 description:Similar to Pathogenesis-related protein PR-10a. (Os12t0555300-00)
Sequence

ATGGACGCGTCCGCCATGCCCAAGGTCTGTGCCGGCTTCGTCGACGACATTGTGGTTGAG
GGGAATGGCGGTCCAGGCACCATCTACACCATGAAGCTTAACCCCGATGCGGGAGTCGGG
AATACATACAAGACCCGAGTGGCGGTGTGTGACAATGCAGCACGCGTGCTAAAGTCAGAG
GTGCTGGAGGCAGAAAGCAAGGTGGGCAAGCTCAAGTCGCACTCGACGGAGACGAAGCTG
GAGGGCACCGGCGATGGCTCCTGCGTGGCCAAGCTCAAGGTGGAGTACGAGCTCGCCGAC
GGCAGCTCGCTGTCGCCGGAGCAGGAGAAGACGATGGTCGACGGCTACTTCGGCATGCTC
AAGATGATGGAGGCGTACCTCGCCGCTCACCCTGCCGAATTCGCCTGA

Peptide Sequence

PEP ID

Os12t0555300-00
PEP Infomation

pep chromosome:IRGSP-1.0:12:22595531:22596804:1 gene:Os12g0555300 transcript:Os12t0555300-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pathogenesis-related gene 10 description:Similar to Pathogenesis-related protein PR-10a. (Os12t0555300-00)
Sequence

MDASAMPKVCAGFVDDIVVEGNGGPGTIYTMKLNPDAGVGNTYKTRVAVCDNAARVLKSE
VLEAESKVGKLKSHSTETKLEGTGDGSCVAKLKVEYELADGSSLSPEQEKTMVDGYFGML
KMMEAYLAAHPAEFA

Transcript Sequence

Transcript ID

Os12t0555300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:22595531:22596804:1 gene:Os12g0555300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pathogenesis-related gene 10 description:Similar to Pathogenesis-related protein PR-10a. (Os12t0555300-00)
Sequence

ATGGACGCGTCCGCCATGCCCAAGGTCTGTGCCGGCTTCGTCGACGACATTGTGGTTGAG
GGGAATGGCGGTCCAGGCACCATCTACACCATGAAGCTTAACCCCGATGCGGGAGTCGGG
AATACATACAAGACCCGAGTGGCGGTGTGTGACAATGCAGCACGCGTGCTAAAGTCAGAG
GTGCTGGAGGCAGAAAGCAAGGTGGGCAAGCTCAAGTCGCACTCGACGGAGACGAAGCTG
GAGGGCACCGGCGATGGCTCCTGCGTGGCCAAGCTCAAGGTGGAGTACGAGCTCGCCGAC
GGCAGCTCGCTGTCGCCGGAGCAGGAGAAGACGATGGTCGACGGCTACTTCGGCATGCTC
AAGATGATGGAGGCGTACCTCGCCGCTCACCCTGCCGAATTCGCCTGA