Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0554800-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:22573093:22576210:1 gene:Os12g0554800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Polygalacturonase-like protein. (Os12t0554800-01)
Sequence	CGGCGGCCTCGGCCGCGGCCGCACAGCGTGACGATCTCGGAGTTCGGGGCGGTGGGCGAC GGGGTGACGGTGAACACGCTGCCGTTCCAGAACGCCATCTTCTACCTCCGGTCGTTCGCC GACAAGGGCGGCGCGCAGCTGTACGTGCCCCGGGGGAGGTGGCTCACCGGCAGCTTCAAC CTCACCAGCCACCTCACCATCTTCCTCGAGAAGGACGCCGTCATCATCGGCGCCAAGGAG GTATCAGAATGGCCAATTGTAGAACCGTTGCCATCATATGGCCAAGGAATCGATCTTCCA GGTGCGAGGCATCGCAGCTTAATAAATGGACACAATGTGACTGATGTTGTAATTACAGGG AACAATGGAATCATAGATGGCCAGGGTTTGACATGGTGGAACTGGTTTCGCTCGAATAAG TTGAACTATAGCCGCCCTCATCTTGTGGAGTTTGTGGATTCGGAAGATATTGTGATTTCA AACTTGACATTATTGAATTCCCCTGCATGGGGTATACATCCAGTGTTTTGTAGCAATGTA ATGGTCCACGATGTCACCATTCGAACCTCATTGGATGCTCCACTTACCGATGGAATTGTT CCAGATTCATGCTCTAATATGTGCATTGAAGATAGCAGTATTAGCGTCGCTCATGATGCT ATCTCGTTAAAAAGTGGGTGGGATAACTATGGCATTACCATTGGAAGGCCGGCATCAGAC ATTCACATAAGCAGAGTAGATCTCCAAGCCTCACTTGGAGCTGCTCTTGCATTTGGGAGT GAGATGTCTGGTGGTATTTCGGATATTCATGTTGATCACCTTAATATCCATGGTTCCTCT AGAGGCATCCTCTTCAAGACTGCACCCGGCCGTGGAGGTTATATAAGAGATGTTGTAATA TCAGATGTCCAAATGGAAGATGTTAATGTCGCCATTAAATTCACTGGCGATTGGTCGACA CACCCAGATAACCATTTTGATCCTTCTGCGCTCCCGATGATCAACCGAATCACACTGAAG AACATGGTTGGAACAAACATATCAGTTGCTGGAGTTTTGTCGGGAATAAACGGTGATCCA TTCACCAATATCTGCCTCTCCAACATCAGTTTCTCCCTAGCTGATTCGACACAATCCAGC TCTTGGTCTTGCTCCAACATCTCCGGATACTCTGAGTTGGTCTTTCCAGAGCCTTGCCCA GACCTCCACCATTCATCCTCCAATTCTTCCATCTGCTTCTCCCTTCTTACCTACCATGCC CTTGCTGCAGCATAA

Peptide Sequence

PEP ID	Os12t0554800-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:22573093:22576210:1 gene:Os12g0554800 transcript:Os12t0554800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Polygalacturonase-like protein. (Os12t0554800-01)
Sequence	RRPRPRPHSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFN LTSHLTIFLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITG NNGIIDGQGLTWWNWFRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSNV MVHDVTIRTSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASD IHISRVDLQASLGAALAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVI SDVQMEDVNVAIKFTGDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDP FTNICLSNISFSLADSTQSSSWSCSNISGYSELVFPEPCPDLHHSSSNSSICFSLLTYHA LAAA

Transcript Sequence

Transcript ID	Os12t0554800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:22573093:22576210:1 gene:Os12g0554800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Polygalacturonase-like protein. (Os12t0554800-01)
Sequence	GCGGCGGCCTCGGCCGCGGCCGCACAGCGTGACGATCTCGGAGTTCGGGGCGGTGGGCGA CGGGGTGACGGTGAACACGCTGCCGTTCCAGAACGCCATCTTCTACCTCCGGTCGTTCGC CGACAAGGGCGGCGCGCAGCTGTACGTGCCCCGGGGGAGGTGGCTCACCGGCAGCTTCAA CCTCACCAGCCACCTCACCATCTTCCTCGAGAAGGACGCCGTCATCATCGGCGCCAAGGA GGTATCAGAATGGCCAATTGTAGAACCGTTGCCATCATATGGCCAAGGAATCGATCTTCC AGGTGCGAGGCATCGCAGCTTAATAAATGGACACAATGTGACTGATGTTGTAATTACAGG GAACAATGGAATCATAGATGGCCAGGGTTTGACATGGTGGAACTGGTTTCGCTCGAATAA GTTGAACTATAGCCGCCCTCATCTTGTGGAGTTTGTGGATTCGGAAGATATTGTGATTTC AAACTTGACATTATTGAATTCCCCTGCATGGGGTATACATCCAGTGTTTTGTAGCAATGT AATGGTCCACGATGTCACCATTCGAACCTCATTGGATGCTCCACTTACCGATGGAATTGT TCCAGATTCATGCTCTAATATGTGCATTGAAGATAGCAGTATTAGCGTCGCTCATGATGC TATCTCGTTAAAAAGTGGGTGGGATAACTATGGCATTACCATTGGAAGGCCGGCATCAGA CATTCACATAAGCAGAGTAGATCTCCAAGCCTCACTTGGAGCTGCTCTTGCATTTGGGAG TGAGATGTCTGGTGGTATTTCGGATATTCATGTTGATCACCTTAATATCCATGGTTCCTC TAGAGGCATCCTCTTCAAGACTGCACCCGGCCGTGGAGGTTATATAAGAGATGTTGTAAT ATCAGATGTCCAAATGGAAGATGTTAATGTCGCCATTAAATTCACTGGCGATTGGTCGAC ACACCCAGATAACCATTTTGATCCTTCTGCGCTCCCGATGATCAACCGAATCACACTGAA GAACATGGTTGGAACAAACATATCAGTTGCTGGAGTTTTGTCGGGAATAAACGGTGATCC ATTCACCAATATCTGCCTCTCCAACATCAGTTTCTCCCTAGCTGATTCGACACAATCCAG CTCTTGGTCTTGCTCCAACATCTCCGGATACTCTGAGTTGGTCTTTCCAGAGCCTTGCCC AGACCTCCACCATTCATCCTCCAATTCTTCCATCTGCTTCTCCCTTCTTACCTACCATGC CCTTGCTGCAGCATAAGTGCATAAAGTACCAAGTGTCCATCCTTCGCTGTTCCAGTCCTT GTACAATCCAGAGAAAAATCCAACTTTTGTCACCATCTTCCTTCCAAATTCTTTCCAAAT AGGTGTACAAAAGAATCACCACTCTTCTTGTGCTACCAGCTTTGAGGCTCATGGATGGAA CAATCTATGCTGGTTTGTCAATGAGGAAGTCTAGAGGGGTTCTCTGCACAATGAAGTGTT TGCTTGTACAGTTAAGATTTGTTCATTCAATCTGTAAGAAAAAAACATTTTTTTTTGGTA GAGGGGATAAGTCTTAGAGAGTCTCTCCATACTACTGTCAATTTTGGTCATATAAAATAA AACATATTATGATTGAGTCACCCTGTATATCCCAATCAATCTTGTGAGAGCATCCAATAA AAAAAAACAGCATATCACATGGT