Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0554500-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:22530250:22535023:-1 gene:Os12g0554500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, class 3 family protein. (Os12t0554500-00)
Sequence	ATGGGAGCCAAGGGCGGGATGGCGACGGCGGCGGGCACGGCGGTGCTGGTGTACCTCGTG CTGTCGGGCCGCCTCTGCGGCGACGCCGCCGGCGACGAGGACCAGACGATATCCGCCGCG GTGTCCGCGGCGGTGGAGGCGCGGAGGAGGCGGAGGAAGGAGGAGGCCGGCCGGGCGAGG AGGCGCGGAGCGCGGGCGCGGCGTTGGCCGGAGCGCGCGCCCGCCGGGTGGGGGGAGGCC GCGGCGGCGGCCGCGCGCACCGTGCGGTACACCTACGGCGAGACGCTCGGCAAGTGGCCC CTCGGCGAGATCGCCTTCGGGCTCAAGTACTACATGCGGCAGCAGGGTAATCTTCAGCAT GAGTATGCTGGAAGCAATTCTCAACTATTGGAAGGGCCTGTGGTAAAGGAGGAGCTAATC TCACTATTAGGATACCTTAAGCTATGCATGTATTTCTCAAAGAAGCCATACAAAGTGTTC ATGGAGTTCGGTGGATATGACGAAAGCGATGTTCTTATAAAGAAATCTAAGGCGAGGCTT ATGAAGCCTTCTTTCACAGTTGTCCGCGATAGAAGTGCGAAATGCTTCCTCCTTTTTATT CGGGGGGCGATCAGCGTTAAGGATCGGTTGACGGCGGCAACCGGAGCAGAGGTTCCATTT CATCATGTTGTGACACAAGATGGTCATGTCTCCAAATTGGTGCTGGGACATGCTCATTGT GGAATGGTAGTGGCAGCTCGCTGGATTGCAAATCAGGCCATTCCTTGCCTCAATGAAGCG GTTGCGCAATTCCCAGATTATGGAGTGAAGATCATTGGGCATTCAATGGGTGCTGGCATC GCTGCAATATTAGCATACATTCTGCGTGAGAATGAGAAGTTATCATCATCCACATGTCTT GCATTTGGACCAGCTGCTTGCATGACATGGGACTTGGCTGAGTCGGGTAAAGACTTCATC ACAACCATTGTCAACAGAAATGACCTAGTTCCATCTTTTGGCAAAGTTTCTGCTGCCAAG CTCCGTACAGAGGTCATGGCATCATCCTGGGTACATGACCTTCGTGAGCAAATTCAGCAG ACCAGATTCTTGGGCTTTGTCAATCGCTCTGTGAGCTTCATCCGATCGCACGTGCCATTC GTCTCTGATCCAAGATCCAAGGTTGTAGATGTTGACATGCTGGTGCCCAACAGCTCTGAG GCTGATCAGGTGAAGCCTTCGTCAAATTCAGATGCTGTGGTGAAGAAACGCCATGCAATA GCTTGCTGGTCATGTGTTGCTGCACATAAGCATTCCATTGACTCTGCAAAACATGGAACT CATGACATCACAAATCAAACTGATGTCAATGTCAAAGCTGAGAAAACTGACATCGAAACG GCACAACTAGTCTCAATTTCCATGGAAGAACTTGACCTTCAAGAATCAGATAATGACGAT GATACCGACAGAGGGGAGAATGAGCCAGCTCTCAATGAAACAGACGAAGATCAGGCCGTG GAGCTTCTAGAAACCTTGACCGACAACCCACACGAGCCGTCATCGTCGAGCCAAAGTCAA GATCCCCCCCAGCTCTACCCTCCAGGAAGAATAATGCACATGGTTGGATTGCCATCATCA TCAGAGCCAAACAGTACAAGTGAACAAGGTGAGGAGGTCGTTGCCTTGTATGAGACACCT CGACATCTTTACAGCAAGATTCGCTTGGCGAGATCCATGATAAGGGAGCATTACATGCCC AAGTACATCAGGACAATGGAGCTGTTGATCGACAAGCTCGTCGCCGAGGAGGAGGACGGC ATCGATGACGACCACAGATTGGGATCATTGTAG

Peptide Sequence

PEP ID	Os12t0554500-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:22530250:22535023:-1 gene:Os12g0554500 transcript:Os12t0554500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, class 3 family protein. (Os12t0554500-00)
Sequence	MGAKGGMATAAGTAVLVYLVLSGRLCGDAAGDEDQTISAAVSAAVEARRRRRKEEAGRAR RRGARARRWPERAPAGWGEAAAAAARTVRYTYGETLGKWPLGEIAFGLKYYMRQQGNLQH EYAGSNSQLLEGPVVKEELISLLGYLKLCMYFSKKPYKVFMEFGGYDESDVLIKKSKARL MKPSFTVVRDRSAKCFLLFIRGAISVKDRLTAATGAEVPFHHVVTQDGHVSKLVLGHAHC GMVVAARWIANQAIPCLNEAVAQFPDYGVKIIGHSMGAGIAAILAYILRENEKLSSSTCL AFGPAACMTWDLAESGKDFITTIVNRNDLVPSFGKVSAAKLRTEVMASSWVHDLREQIQQ TRFLGFVNRSVSFIRSHVPFVSDPRSKVVDVDMLVPNSSEADQVKPSSNSDAVVKKRHAI ACWSCVAAHKHSIDSAKHGTHDITNQTDVNVKAEKTDIETAQLVSISMEELDLQESDNDD DTDRGENEPALNETDEDQAVELLETLTDNPHEPSSSSQSQDPPQLYPPGRIMHMVGLPSS SEPNSTSEQGEEVVALYETPRHLYSKIRLARSMIREHYMPKYIRTMELLIDKLVAEEEDG IDDDHRLGSL

Transcript Sequence

Transcript ID	Os12t0554500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:22530250:22535023:-1 gene:Os12g0554500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, class 3 family protein. (Os12t0554500-00)
Sequence	ACCTCGCCTCGCCTCTCCCTCGCCATCGCCGATGGGAGCCAAGGGCGGGATGGCGACGGC GGCGGGCACGGCGGTGCTGGTGTACCTCGTGCTGTCGGGCCGCCTCTGCGGCGACGCCGC CGGCGACGAGGACCAGACGATATCCGCCGCGGTGTCCGCGGCGGTGGAGGCGCGGAGGAG GCGGAGGAAGGAGGAGGCCGGCCGGGCGAGGAGGCGCGGAGCGCGGGCGCGGCGTTGGCC GGAGCGCGCGCCCGCCGGGTGGGGGGAGGCCGCGGCGGCGGCCGCGCGCACCGTGCGGTA CACCTACGGCGAGACGCTCGGCAAGTGGCCCCTCGGCGAGATCGCCTTCGGGCTCAAGTA CTACATGCGGCAGCAGGGTAATCTTCAGCATGAGTATGCTGGAAGCAATTCTCAACTATT GGAAGGGCCTGTGGTAAAGGAGGAGCTAATCTCACTATTAGGATACCTTAAGCTATGCAT GTATTTCTCAAAGAAGCCATACAAAGTGTTCATGGAGTTCGGTGGATATGACGAAAGCGA TGTTCTTATAAAGAAATCTAAGGCGAGGCTTATGAAGCCTTCTTTCACAGTTGTCCGCGA TAGAAGTGCGAAATGCTTCCTCCTTTTTATTCGGGGGGCGATCAGCGTTAAGGATCGGTT GACGGCGGCAACCGGAGCAGAGGTTCCATTTCATCATGTTGTGACACAAGATGGTCATGT CTCCAAATTGGTGCTGGGACATGCTCATTGTGGAATGGTAGTGGCAGCTCGCTGGATTGC AAATCAGGCCATTCCTTGCCTCAATGAAGCGGTTGCGCAATTCCCAGATTATGGAGTGAA GATCATTGGGCATTCAATGGGTGCTGGCATCGCTGCAATATTAGCATACATTCTGCGTGA GAATGAGAAGTTATCATCATCCACATGTCTTGCATTTGGACCAGCTGCTTGCATGACATG GGACTTGGCTGAGTCGGGTAAAGACTTCATCACAACCATTGTCAACAGAAATGACCTAGT TCCATCTTTTGGCAAAGTTTCTGCTGCCAAGCTCCGTACAGAGGTCATGGCATCATCCTG GGTACATGACCTTCGTGAGCAAATTCAGCAGACCAGATTCTTGGGCTTTGTCAATCGCTC TGTGAGCTTCATCCGATCGCACGTGCCATTCGTCTCTGATCCAAGATCCAAGGTTGTAGA TGTTGACATGCTGGTGCCCAACAGCTCTGAGGCTGATCAGGTGAAGCCTTCGTCAAATTC AGATGCTGTGGTGAAGAAACGCCATGCAATAGCTTGCTGGTCATGTGTTGCTGCACATAA GCATTCCATTGACTCTGCAAAACATGGAACTCATGACATCACAAATCAAACTGATGTCAA TGTCAAAGCTGAGAAAACTGACATCGAAACGGCACAACTAGTCTCAATTTCCATGGAAGA ACTTGACCTTCAAGAATCAGATAATGACGATGATACCGACAGAGGGGAGAATGAGCCAGC TCTCAATGAAACAGACGAAGATCAGGCCGTGGAGCTTCTAGAAACCTTGACCGACAACCC ACACGAGCCGTCATCGTCGAGCCAAAGTCAAGATCCCCCCCAGCTCTACCCTCCAGGAAG AATAATGCACATGGTTGGATTGCCATCATCATCAGAGCCAAACAGTACAAGTGAACAAGG TGAGGAGGTCGTTGCCTTGTATGAGACACCTCGACATCTTTACAGCAAGATTCGCTTGGC GAGATCCATGATAAGGGAGCATTACATGCCCAAGTACATCAGGACAATGGAGCTGTTGAT CGACAAGCTCGTCGCCGAGGAGGAGGACGGCATCGATGACGACCACAGATTGGGATCATT GTAGCATTGGCTGGTGTACAGAATAATTGTTGTTGTTATTGTTGTACAGATTATGGAAAA GAAAAAAGGCAGCATGGTTTTCAGATTGCTAGTAGCTGTACCATAGTTCTGATGATTGTT TTCATGGTTTGTGGTTAGCATCCAGGAGGCTGTAAACTCCTGATAGATTGTGTTATGATG ATTCGCTGTCATTTCCTTTTGACAGCGGCCATCACAGGAAGGGCTAAAGAGCTGAACCTC GTGATGGTTTCTGTAATTCAGAAGCAATTTGTTTGTTTTTAGCTGTGAATATTAAT